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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a13r
         (749 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito...    28   1.2  
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch...    28   1.6  
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    27   2.9  
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc...    26   5.0  
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch...    26   5.0  
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S...    26   6.6  
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ...    26   6.6  
SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate syntha...    26   6.6  
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S...    26   6.6  
SPAC24B11.08c |||COPII-coated vesicle component Erv46|Schizosacc...    26   6.6  
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||...    26   6.6  
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    25   8.7  
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c...    25   8.7  
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas...    25   8.7  
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ...    25   8.7  

>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
            pyrophosphate synthase |Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 920

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
 Frame = -2

Query: 463  LHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEFQIE---- 296
            ++  L  I+   +   LP   I +      L++ T+    L+E  N +G+ EF +     
Sbjct: 808  IYTLLNCILESGLPMKLPRNQIPE------LDYLTQICFELFERTNPSGNKEFSVRITLS 861

Query: 295  --CFNGCKMFIE---DYCERNERKVQSVLHLDLIRFVTESEIL 182
              C+  C + +     +C     +     HLDL +F+T++E L
Sbjct: 862  PGCYAQCPLDMNLDAKHCISVSPRRSLTRHLDLQQFITKTEDL 904


>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
           Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 775

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 631 LLDNPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLI 473
           LL+NP+ S+L Y+D L     R    K++    + +       D Y+  LYL+
Sbjct: 370 LLNNPSSSILPYQDGL-----RPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLL 417


>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 624

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 112 SLTFTQINSDEYLVCKACNATARS 41
           +L+ TQ NSD + VC AC    RS
Sbjct: 530 ALSATQNNSDSFAVCLACAMIQRS 553


>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
           Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1958

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -1

Query: 440 NEYQYGTTTS*--DIYRKSERFYIIKSCN 360
           +EY++GT  S    I+RK E FY  K+C+
Sbjct: 85  DEYRHGTCESKCGHIFRKGEVFYRCKTCS 113


>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1031

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -2

Query: 262 YCERNERKVQSVLHLDLIRFVTESEILICQCCDE-QLNRFSCKEGHLNMFCSLTFTQIN- 89
           + E NER+VQS    + ++ + E E    +  D+  +   +     LN F +    Q+N 
Sbjct: 3   FTEANEREVQSSYEKENVKIIREEEAKDQESTDDIAVEDGTGTSPDLNFFSTQNVMQMNF 62

Query: 88  SDEY 77
            DEY
Sbjct: 63  EDEY 66


>SPCC1827.04 |||ankyrin repeat protein, unknown biological
           role|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 600

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 559 KLKELPSADYDKLYQDGHT 503
           K++E    DYDKL+ +GH+
Sbjct: 543 KIEEQSKRDYDKLHGEGHS 561


>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 376

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 583 NLLRYRTMKLKELPSADYDKLYQDGHTDVYKMK 485
           +L RY  M L  LP++++D  +      VYK+K
Sbjct: 71  DLKRYTFMGLLTLPTSEHDVYFNATRVLVYKLK 103


>SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate synthase
           Arg5 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 415

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 367 HATKTINNLYEILN 326
           H TKT+NNL E++N
Sbjct: 278 HLTKTVNNLRELMN 291


>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 673

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = -2

Query: 178 CQCCDE--QLNRFS---CKEGHLNMFCSLTFTQINSDEYLVCKACNA 53
           C  C+   Q N  S   C  GH+   CS+T   ++      C  CN+
Sbjct: 593 CPACEATVQFNNTSLATCDNGHVWRRCSVTMLLLSQKAAKYCAVCNS 639


>SPAC24B11.08c |||COPII-coated vesicle component
           Erv46|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 517 QDGHTDVYKMKLYLICLILHNKLKSIMNISMEPPL 413
           Q+G+  V+  + Y+  L LH+   SI ++S  PPL
Sbjct: 221 QNGNQHVHDTRDYINELDLHDMSHSIHHLSFGPPL 255


>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 633

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 100 TQINSDEYLVCKACNATARS 41
           TQ NSD + VC AC    RS
Sbjct: 562 TQNNSDSFAVCVACALVQRS 581


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 445 SIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILN 326
           SI NIS  P     S E+ KD+ L N++   +  + EI N
Sbjct: 353 SIRNISSIPQFLSLSEEQTKDY-LPNYSKNQLKEMREIAN 391


>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 585

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 261 IVREMNGKFKVFYIWT*SGL*RKV 190
           IV+ +NG+F +  IW   GL RK+
Sbjct: 544 IVKYLNGRFALQTIWVAEGLPRKL 567


>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
           PP1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -2

Query: 598 YRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLICLILHNKLK 446
           Y D L L  Y        P A+Y  L+   + D  K  L +ICL+L  K+K
Sbjct: 68  YYDLLRLFEYGGFP----PEANY--LFLGDYVDRGKQSLEVICLLLAYKIK 112


>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 965

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 307 FQIECFNGCKMFIEDYCER 251
           F+I   NG K+  + YCER
Sbjct: 705 FEITMTNGMKLVFQSYCER 723


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,097,220
Number of Sequences: 5004
Number of extensions: 65411
Number of successful extensions: 180
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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