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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a10f
         (628 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch...    55   7e-09
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual        50   2e-07
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom...    48   1e-06
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy...    36   0.004
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S...    34   0.015
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce...    33   0.026
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa...    30   0.31 
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    30   0.31 
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R...    29   0.73 
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy...    29   0.73 
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    27   1.7  
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p...    27   2.2  
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s...    27   2.9  
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An...    27   2.9  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    27   2.9  
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb...    26   3.9  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    26   3.9  
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c...    26   5.1  
SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein L21|Sch...    25   6.8  
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po...    25   6.8  
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce...    25   9.0  

>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 642

 Score = 55.2 bits (127), Expect = 7e-09
 Identities = 26/78 (33%), Positives = 45/78 (57%)
 Frame = +2

Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
           +F A   GE+  ++ L+    ++V NA D+ G T  HWA+L+  + + ++L+E  A V+ 
Sbjct: 4   LFLAASQGELDTVKNLISSEKIDV-NATDEGGATALHWAALNQQIPICKFLLEHGADVN- 61

Query: 518 SCLGTQGPRPIHWACRKG 571
           +  G     PIHWA ++G
Sbjct: 62  AIGGDLQAAPIHWAAKRG 79



 Score = 29.1 bits (62), Expect = 0.55
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +2

Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGH 574
           ++ RD   +TP  WAS  G+  +   L+   A  D+         P+HW+   G+
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGA--DVLATDEDKMTPLHWSIVGGN 179



 Score = 28.7 bits (61), Expect = 0.73
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 440 PAHWASLDGSVAVMRYLVERSA 505
           P HWA+  GSV  + YLV+  A
Sbjct: 71  PIHWAAKRGSVKTVHYLVQHGA 92


>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 234

 Score = 50.4 bits (115), Expect = 2e-07
 Identities = 30/96 (31%), Positives = 52/96 (54%)
 Frame = +2

Query: 296 TITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVA 475
           TIT+    + LH     A   G +S ++ L +K   E++  +D  G TP H A+  G + 
Sbjct: 101 TITTRGGQTCLHY----AAGKGRLSIVQLLCDK-APELIRKKDLQGQTPLHRAAAVGKIQ 155

Query: 476 VMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
           V++YL+ + AP++ S   + G  P+H+A  +GH  +
Sbjct: 156 VVKYLISQRAPLNTS--DSYGFTPLHFALAEGHPDV 189



 Score = 28.3 bits (60), Expect = 0.96
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +2

Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
           +  A   G++  ++ L+ +     LN  D +G+TP H+A  +G   V   LV   A
Sbjct: 145 LHRAAAVGKIQVVKYLISQRAP--LNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198



 Score = 27.1 bits (57), Expect = 2.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVER 499
           LNA D    TP HWA   G V  + +L+++
Sbjct: 30  LNAVDDDKRTPLHWACSVGKVNTIYFLLKQ 59


>SPBP16F5.05c |||ribosome biogenesis protein
           Nop8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 146

 Score = 48.0 bits (109), Expect = 1e-06
 Identities = 26/87 (29%), Positives = 47/87 (54%)
 Frame = +2

Query: 323 DLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERS 502
           D+  LI+ A R+ +   ++ ++EK   E L+ RD++G +  H AS +G +AV++ ++   
Sbjct: 2   DVDDLIY-ACRAADEELLDEIIEKCPQE-LSRRDENGNSGLHMASANGHIAVVQKIIPYL 59

Query: 503 APVDLSCLGTQGPRPIHWACRKGHASI 583
               ++     G   +HWA   GHA I
Sbjct: 60  NKEVINAQNESGNTAMHWAALNGHAEI 86



 Score = 43.6 bits (98), Expect = 2e-05
 Identities = 16/50 (32%), Positives = 33/50 (66%)
 Frame = +2

Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVE 496
           A  +G ++ +++++  L  EV+NA+++ G T  HWA+L+G   + + L+E
Sbjct: 43  ASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLE 92


>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 523

 Score = 36.3 bits (80), Expect = 0.004
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +2

Query: 344 EAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
           EA R G++  ++ LVE     + N  DQ  Y+P   ASL G   V+++L+E  A
Sbjct: 58  EACRRGDLEVVKSLVENYNTPI-NQVDQFDYSPLVLASLCGHEPVVKFLLENGA 110


>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
           role|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 207

 Score = 34.3 bits (75), Expect = 0.015
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = +2

Query: 413 NARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRK 568
           NA D++GYTP H A   G   +++ LVER    D++     G  P+ + C K
Sbjct: 31  NAADENGYTPIHAAVSYGHSDLLKILVERGG--DINIRDQDGETPL-FVCEK 79


>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1151

 Score = 33.5 bits (73), Expect = 0.026
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 410  LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPI 550
            +N RD  GYTP H+ASL     +   L+   A  D+  +G  G +PI
Sbjct: 888  VNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDV--IGASGKKPI 932


>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
           Nup132|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1162

 Score = 29.9 bits (64), Expect = 0.31
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 350 VRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASL 460
           +RS +  E+ER++  LG+++LN+R  H   P  +ASL
Sbjct: 483 LRSIKKPELERIIVDLGMDILNSRSTH--LPPLFASL 517


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 29.9 bits (64), Expect = 0.31
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +2

Query: 212 PPPCTMAAEESLPQGS----PMSPDAPVAPP 292
           PP    +A  SLP G+    P+ P AP+APP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458



 Score = 26.6 bits (56), Expect = 2.9
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +2

Query: 203 LPQPPPCTMAAEESLPQGSPMS--PDAPVAPP 292
           +P PP    +A  SLP  +P S    AP APP
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448


>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
           Res1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 637

 Score = 28.7 bits (61), Expect = 0.73
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 422 DQHGYTPAHWASLDGSVAVMRYLVERSAPV 511
           D+ G+T  HWA+  G++ +M  L++  A V
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANV 263


>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 991

 Score = 28.7 bits (61), Expect = 0.73
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 218 PCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLI 340
           P   A  E LP G+ + PD  +  P  +   N Y D++ ++
Sbjct: 20  PVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 149 AVSSKVYPSPGAARGVWALPQPPPCTMAAE-ESLPQG--SPMSPDAPVAPPR 295
           A+S    P    A  V ++PQPP   +  E  S+PQ   +P++P+ P  P R
Sbjct: 571 ALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQR 622



 Score = 27.1 bits (57), Expect = 2.2
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 200 ALPQPPPCTMAAEE---SLPQGSPMSPDAPVAPPR 295
           ++PQPP   +  E      P  +P++P+ P AP R
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQR 547



 Score = 26.2 bits (55), Expect = 3.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = +2

Query: 200 ALPQPPPCTMAAE-ESLPQ--GSPMSPDAPVAP 289
           ++PQPP   +A E  S+PQ    P+ P+AP  P
Sbjct: 603 SVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVP 635



 Score = 25.0 bits (52), Expect = 9.0
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +2

Query: 200 ALPQPPPCTMAAE-ESLPQ--GSPMSPDAPVAP 289
           ++PQPP   +  E  S+PQ    P+ P+AP  P
Sbjct: 633 SVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVP 665


>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 704

 Score = 27.1 bits (57), Expect = 2.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -2

Query: 504 ADLSTRYRMTATLPSSDAQCAGV*PCWSRAFKTSTPSFSTRRSISDTSP 358
           AD+    R+ + +PS+D +C+      +   + ST     R +IS T+P
Sbjct: 15  ADIHRALRIPSPIPSTDYECSDYASTIASISRESTMRNFNRSNISSTAP 63


>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
           subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 657

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +2

Query: 404 EVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGP 541
           +V +  D  G+T  HWA   G + +++ L+  +A + +    +Q P
Sbjct: 239 QVNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTP 284


>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
           family |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 430

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -1

Query: 223 ARGRLWQRPHAARRPRTWIYLATHGEADAPRYSRVLAVRHDQRLFTENLY 74
           AR R W    A +   +W+Y        AP       +RHD+ +   N+Y
Sbjct: 199 ARARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKDIIVPNVY 248


>SPAC29B12.07 |sec16||multidomain vesicle coat component
            Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 200  ALPQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFN 313
            A P PPP     +   P  +P S   P  PP   T+ +
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAIS 1917


>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 489

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +2

Query: 98  LVVADCENSAVAGGVGLAVSSKVYPSPGAARGVWALP 208
           L++  C +  + GG+  A++  +Y     +  +W LP
Sbjct: 66  LIIVACGSFIITGGIEFAIAYGMYKKTETSVRLWRLP 102


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = +2

Query: 149  AVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
            A SS + P P  A GV   P PPP           G P  P    APP
Sbjct: 1173 APSSGIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218



 Score = 25.0 bits (52), Expect = 9.0
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 200  ALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
            A P P P   A    +P G+P  P   VA P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150


>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 513

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 127 SRVLAVRHDQRLFTENLYTAIQASLNFDFFYTTQSSLDLR 8
           S +LAVRHD+++F+E+    +       +F T+    D+R
Sbjct: 33  SLILAVRHDKQVFSEDYRQVVD-----QYFETSPKKNDIR 67


>SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein
           L21|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 160

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 189 RAAPGLGYTLLLTARPTPPATAEF 118
           + A   G T+ L  +P PPATA F
Sbjct: 117 KEAKAQGKTVQLRRQPAPPATAHF 140


>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 742

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 195 TPRAAPGLGYTLLLTARPTPPATAEFSQSA 106
           TP ++ G G  LLLTAR   P    +++ A
Sbjct: 599 TPPSSSGFGDNLLLTARLAKPDMLNYAKRA 628


>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1297

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 183  APGLGYTLL-LTARPTPPATAEFSQSA 106
            +P LG TL+    RPTP    EF++SA
Sbjct: 1267 SPKLGKTLMGQDIRPTPDDVPEFNESA 1293


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,164
Number of Sequences: 5004
Number of extensions: 59100
Number of successful extensions: 200
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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