Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_A23
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 32 0.13
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 29 0.68
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 28 1.6
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 2.7
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 27 2.7
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 27 3.6
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 3.6
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.6
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 4.8
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 26 6.3
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 26 6.3
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 26 6.3
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 26 6.3
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 26 6.3
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 26 6.3
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 6.3
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 8.4
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 8.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 8.4
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.9 bits (69), Expect = 0.13
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Frame = +2
Query: 275 QWHLQALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHE-----QWTTEGYYERANKEA 439
Q + + +A QR+ +L EE K Q E + + + Q ER +EA
Sbjct: 558 QAYREKVAQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREA 617
Query: 440 ELLRQ---QKIRAAKLEE--RRQKLELMLFQENMQYQQELKNLSAQPKLYKNGSYLNKVP 604
E L + QK AK +E R+++ E L +E + QQEL+ + K + K
Sbjct: 618 ERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEK--QKQKEREKKL 675
Query: 605 TSTLQDINQGIIEKEEQLRKHE 670
Q+ ++ + +E++LR+ E
Sbjct: 676 KKQQQEADREKMAREQRLREEE 697
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 29.5 bits (63), Expect = 0.68
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 293 LAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKE-AELLRQQKIRA 469
+ A R D + + Q V QYFE + K+ W T+G+ A + E + ++ +R+
Sbjct: 35 ILAVRHDKQVFSEDYRQVVDQYFETSPKKNDIRLFWNTQGFVRLAIVQLEENVSEKSVRS 94
Query: 470 AKLE 481
A E
Sbjct: 95 AAAE 98
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 163 EVIRIVKITSSQ*IVSLSAITQFSSFKLNRLLFH 62
E+ + V +TS+Q + A+T+ SSF+L R FH
Sbjct: 798 EIYKTVSVTSTQ---IMPAVTKMSSFELEREQFH 828
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 27.5 bits (58), Expect = 2.7
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 338 LQKVAQYFEANTNKS-RHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERRQKLELML- 511
LQ V QY + K+ R H W E AEL KIR A+LE R KLE L
Sbjct: 24 LQGVIQYLQYEAFKNERDHNLWEIE--------RAEL----KIRVAQLERERAKLEQSLS 71
Query: 512 FQE 520
FQ+
Sbjct: 72 FQQ 74
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 639 IIPWFMSCSVDVGTLLRYDPFLYNLGCAERFLSS---CWYCIFS 517
+IP ++C + G L Y P +NLG A F+++ CW S
Sbjct: 441 VIP--IACKLIFGKRLNYKPGPWNLGWASHFVNAYAVCWTAFVS 482
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +3
Query: 81 SLKLENCVIADNETIYCEEVILTIRMTSHTPITVRCRRPHYAITVYAIIASKEVERRTRC 260
+LK E V+ +I + T ++ +T T+ R+ I I + + ++
Sbjct: 303 ALKKEKSVVIGMYSI----ISTTYAISDNTNPTIESRKMWIDIAQEFEIPIRCIHLQSSE 358
Query: 261 PAPNHNGIYRHWLHNVETMCSVALKSFK 344
HN ++R+ HN + + +A SFK
Sbjct: 359 ELARHNNVFRYIHHNQKQLPEIAFNSFK 386
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.1 bits (57), Expect = 3.6
Identities = 34/142 (23%), Positives = 61/142 (42%)
Frame = +2
Query: 311 DNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRAAKLEERR 490
D V R+ E+L E N+ R ++ E E+ L R I + +ER
Sbjct: 627 DLVKRKEEQLNAQLSQLENLQNEERKLQEKVNE-------HESLLSRTNDILSTLRKERD 679
Query: 491 QKLELMLFQENMQYQQELKNLSAQPKLYKNGSYLNKVPTSTLQDINQGIIEKEEQLRKHE 670
+KL + E Q Q+ +++ Q L + KVP +I EK E +RK
Sbjct: 680 EKL--IPIHEWQQLQERIEH---QTLLLRQRE---KVPEQFAAEI-----EKNEDIRKEN 726
Query: 671 AELRLHHAWRLRQPELRAANSY 736
E ++ ++++ ++A N++
Sbjct: 727 FEALMNSVLKVKENSIKATNNF 748
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Frame = +2
Query: 302 QRRDNVLRRAEELQKVAQYFEAN---TNKSRHHEQWTTEGYYE------RANKEAELLRQ 454
+RR + A L+++ YFE N R + QW Y + R E
Sbjct: 163 ERRSGISPNANFLRQLRVYFECNYQLDRSLRPYRQWLFRRYGDFAVLNTRVPSEVAYAET 222
Query: 455 QKIRAAKLEERRQKLELMLFQENMQYQQELKN 550
+ RA +LE R +K +L + E K+
Sbjct: 223 VRARAGQLELRCKKCRFVLASSDYLVSHEPKD 254
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 26.6 bits (56), Expect = 4.8
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Frame = +2
Query: 449 RQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKLYK-NGSYLNKVPTST-LQD 622
R Q+++ AKL E+R+ L L + N + ++L+ S K YK + S + T T L D
Sbjct: 16 RNQELQEAKLNEKRRALRKAL-EGNKELNKDLQEDSQLQKDYKYDESRATQEETETNLDD 74
Query: 623 INQGIIEKEEQL---RKHEAELRLHHAWRLRQPELRAANSYIAN 745
+ E+E ++ E RL A ++ L NSY N
Sbjct: 75 EYHRLGEREPKVLVTTSREPSSRL--AQFAKEVRLLIPNSYRLN 116
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 389 HEQWTTEGYYERANKE 436
+ QWTT+ ++E ANK+
Sbjct: 708 YTQWTTQKFFEEANKQ 723
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -1
Query: 555 ERFLSSCWYCIFSWNNISSSFWRLSSNFAALIFCCLNNSASLFARS 418
+ F++ C Y ++ ++++ ++SS + CL N S F +S
Sbjct: 692 QMFVACCGYVVYYFSSLHFGASQISSAIGSFAVGCLGNMYSHFIKS 737
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 579 FLYNLGCAERFLSSCWYC-IFSWNNISSSF---WRLSSNFAALIFCCLNNSASLFARS*Y 412
F+ L C E + C I +W ++S + LS+NF + S F RS
Sbjct: 343 FIKKLVCNECSMHPCDIEEIIAWRTLNSLYPSKATLSNNFVSTSDLSFW-SREYFVRSKG 401
Query: 411 PSVVHCSWC 385
S +HC WC
Sbjct: 402 KSYLHCFWC 410
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +2
Query: 431 KEAELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQP 565
++A ++Q +E R+Q+LE+ + + +QY ++L+ + P
Sbjct: 81 QKANQIKQLNEEKLSIEARKQQLEIEIRNQLLQYAEKLRIVVKTP 125
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 291 HWLHNVETMCSVALKSFKKWLSTLKPILINQDTT 392
H +N E+MC + L + L+ PI++N T
Sbjct: 614 HAANNYESMCEITLPELLQVLNQEDPIMVNIGAT 647
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 140 NFNDTYDLTYSNYGSLSSPTLCNNRLCDHCIK 235
NF + +++ LSS + NN LCD+C K
Sbjct: 286 NFGSNDNHSHNKKRRLSSLSTNNNHLCDNCHK 317
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 452 VLIIQLLYLLVHSILQWSIVRGVLIY*YWLQSTEPLFE 339
V I L L+VH +L+ ++R V + S P+FE
Sbjct: 1335 VFFISFLPLVVHDLLEKGVIRAVARLCKQIFSLSPMFE 1372
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 162 RSYVSLKLLPHNKLSHCPQSRNFQVSN 82
R+ +S P +KLS P+SRN +SN
Sbjct: 821 RNSISSTKSPQHKLSDQPRSRNNSISN 847
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/84 (20%), Positives = 39/84 (46%)
Frame = +2
Query: 440 ELLRQQKIRAAKLEERRQKLELMLFQENMQYQQELKNLSAQPKLYKNGSYLNKVPTSTLQ 619
E L++Q + + + L + Q++ +++ + + + + L K+
Sbjct: 347 EELKEQTNKLYEAYRTERLLSSGISQDHSVFREVNPSAKLEEERALHEEKLMKMEAEMKT 406
Query: 620 DINQGIIEKEEQLRKHEAELRLHH 691
+Q + EKE++L++ E ELR H
Sbjct: 407 IFSQKVQEKEDRLKQSENELRTRH 430
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 362 EANTNKSRHHEQWTTEGYYERANKEAELLRQ-QKIRAAKLEERRQKLE-LMLFQENMQYQ 535
E +NKS EQ E +NK LRQ + A+ + ++KLE + +E+ +
Sbjct: 241 EQASNKSLRGEQERLEKLLVSSNKTVSTLRQTENSLRAECKTLQEKLEKCAINEEDSKLL 300
Query: 536 QELKN 550
+ELK+
Sbjct: 301 EELKH 305
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,166,895
Number of Sequences: 5004
Number of extensions: 62839
Number of successful extensions: 247
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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