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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0027
         (801 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   281   1e-76
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   159   4e-40
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   157   2e-39
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...   122   6e-29
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    70   3e-13
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    67   3e-12
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    66   7e-12
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    51   2e-07
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    42   1e-04
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    31   0.14 
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|...    27   2.3  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   3.1  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    27   4.1  
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual     27   4.1  
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz...    25   9.5  
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch...    25   9.5  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  281 bits (688), Expect = 1e-76
 Identities = 137/181 (75%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
 Frame = +3

Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
           GMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LL
Sbjct: 46  GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLL 105

Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
           TEAPL P+  + +            A YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPI
Sbjct: 106 TEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 165

Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSFV--TSRRTVYVAXDFE 788
           YEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F    + +  V     +  YVA DFE
Sbjct: 166 YEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTF-STTAEREIVRDIKEKLCYVALDFE 224

Query: 789 Q 791
           Q
Sbjct: 225 Q 225



 Score =  106 bits (255), Expect = 3e-24
 Identities = 58/127 (45%), Positives = 69/127 (54%)
 Frame = +1

Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHRAK 303
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MV   ++        ++K
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61

Query: 304 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMTQ 483
                                 +             P          P NPK+NREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121

Query: 484 IMFETFN 504
           I+FETFN
Sbjct: 122 IIFETFN 128


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  159 bits (386), Expect = 4e-40
 Identities = 70/158 (44%), Positives = 107/158 (67%)
 Frame = +3

Query: 246 RDGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 425
           + G +  KD  VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    
Sbjct: 43  KTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRK 102

Query: 426 VLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 605
           +LLTE P+ P   + +             +YVAIQAVLSLYA G ++G+V+DSGDGV+H 
Sbjct: 103 ILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHI 162

Query: 606 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 719
           VP+YE   L H + RLD+AGRD T YL+ +L  +GY+F
Sbjct: 163 VPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAF 200



 Score = 48.0 bits (109), Expect = 2e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = +1

Query: 130 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 234
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  157 bits (380), Expect = 2e-39
 Identities = 78/177 (44%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
 Frame = +3

Query: 264 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 440
           QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE
Sbjct: 53  QKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTE 112

Query: 441 APLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 620
            PL     + +        +   A+  ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+
Sbjct: 113 PPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYD 172

Query: 621 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSFV--TSRRTVYVAXDF 785
           G+++P AI + ++ GRD+TDYL   L + G+  +   + K  V     +  YVA DF
Sbjct: 173 GFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELV-SSAEKEIVREIKEKCCYVASDF 228



 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = +1

Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 252
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVM 48


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score =  122 bits (294), Expect = 6e-29
 Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
 Frame = +3

Query: 270 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 446
           D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H  LLTE P
Sbjct: 73  DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132

Query: 447 LQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 602
           L P   +         +   A +Y+A+QAVL+L AS  +        TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192

Query: 603 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 707
            +P+ EGY +  +I  + LAGRD+T ++  +L +R
Sbjct: 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +1

Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 225
           +++DNG+G  K G+AG+DAP  VFP+++
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 70.1 bits (164), Expect = 3e-13
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = +3

Query: 312 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLQPQGQQREDDPDHV 491
           + +K  I +G V NWD    +W +    +L+  P EHP+L+TE    P   + +      
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122

Query: 492 RNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 671
            +++  A Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L         +G  
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNA 182

Query: 672 LTDYLMKILTERGYSFIP 725
           + D L + L ++ +  +P
Sbjct: 183 INDILAQTLRDKNFEVMP 200



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +1

Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 228
           +EV+A+V+D GS   + GF+G+D P+ V PS  G
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 66.9 bits (156), Expect = 3e-12
 Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
 Frame = +3

Query: 246 RDGGMGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 422
           RD  + +  + VG++   + G  ++ + P E  +++NWD ME++  +TF  +L +   EH
Sbjct: 58  RDRKLSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEH 116

Query: 423 PVLLTEAPLQPQGQQREDDPDHVRNIQHA-AMYVAIQAVLSLYASGR--TTGIVLDSGDG 593
           P+ +TE PL      R    + +  + +A ++   I  + S Y + +  ++GIVL+ G+ 
Sbjct: 117 PICMTE-PLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNA 175

Query: 594 VSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 719
            SH +P+  G  +     R+   G   + YL+K+   +  SF
Sbjct: 176 ASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217



 Score = 35.9 bits (79), Expect = 0.007
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +1

Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 237
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 65.7 bits (153), Expect = 7e-12
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
 Frame = +3

Query: 267 KDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 440
           ++ YV DE Q    I  + +K    +GI+ +W+     W      +L+V P E+ +++TE
Sbjct: 49  RNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITE 108

Query: 441 APLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 620
               PQ  +++        +   A Y+  QAV   +A+ ++T +++D G   +   P+ +
Sbjct: 109 PSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVD 168

Query: 621 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSFVTSRRTVYVAXDFEQGNG 800
           G  +   I +  LAG  L   + ++       F PP     +  +R++V +       NG
Sbjct: 169 GLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEF-PP----HYRIARKSVAIQQSGNMANG 223



 Score = 36.7 bits (81), Expect = 0.004
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 228
           EE+ +LV+D GS   + G+AG+++P  + PS  G
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 50.8 bits (116), Expect = 2e-07
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
 Frame = +3

Query: 327 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLQPQGQQREDDPDHVR 494
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L          +         
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 495 NIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 674
             Q     +A + ++ LYA G   G+V+D G   +   PI +G  +  A  +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231

Query: 675 TDYLMKILTE 704
           T +L  +L E
Sbjct: 232 TQHLQNLLRE 241


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 16/51 (31%), Positives = 33/51 (64%)
 Frame = +3

Query: 570 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFI 722
           +V+DSG   +H +P+ +      A+ R+D+ G+ LT+YL ++++ R Y+ +
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMM 209


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 13/64 (20%), Positives = 34/64 (53%)
 Frame = +3

Query: 528 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 707
           +++ + + +G +   V+D G   +    + EG  +P++ ++++  G D+T   MK+L   
Sbjct: 280 ESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRS 339

Query: 708 GYSF 719
            + +
Sbjct: 340 HFPY 343


>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 194

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
 Frame = +2

Query: 497 HSTRRHVRRHPS----RALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSR 664
           HST R     P+    R    R RS HR+  G  RR  P+R HL R     RH  +    
Sbjct: 121 HSTSRSRSTSPANRHRRKEKERTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHS 175

Query: 665 SRPHRLPHEDPH 700
            R  R      H
Sbjct: 176 KRDDRYERRREH 187


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 553  PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 645
            P VP  S   P+   P P PS++    P PS
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080



 Score = 26.6 bits (56), Expect = 4.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 172  KAGFAGDDAP-RAVFPSIVGRPRHQGVMVVWD 264
            KA F+G     R+ +   VG+P H G++  WD
Sbjct: 1533 KAKFSGQKGTLRSKYSLEVGKPMHYGIISEWD 1564


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 562 PPVSCWTPATVSPTPCPSTKDTHSP 636
           PPV+C TP    P  C   K  H P
Sbjct: 631 PPVACGTPIPDCPYLCVLPKSCHHP 655


>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 325

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 668 RPHRLPHEDPHRARLLVHTTAEREIVRDIKENCVR 772
           RP + P  DPH + L        + +++ KE+C R
Sbjct: 263 RPQKPPQIDPHSSSLADEYRESNKRLQESKESCAR 297


>SPAC637.07 |moe1||translation initiation factor eIF3d
           Moe1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 567

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -2

Query: 611 GHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGVLNVS 492
           G G GDTV       GG  GR  R    D D H  + N S
Sbjct: 139 GRGAGDTVVSRSSGAGGARGR--RFGWKDYDKHQRLRNAS 176


>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 862

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 699 TERGYSFIPPPSGKSFVTSR 758
           T +GYSF  PP  KS V  R
Sbjct: 699 TSQGYSFYRPPKPKSSVRKR 718


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,430,153
Number of Sequences: 5004
Number of extensions: 74364
Number of successful extensions: 264
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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