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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0026
         (719 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    59   5e-10
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb...    52   1e-07
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom...    38   0.001
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p...    28   1.5  
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy...    28   1.5  
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc...    28   1.5  
SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyc...    28   1.5  
SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner mem...    27   2.7  
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S...    27   3.6  
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc...    26   6.2  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        26   6.2  
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa...    25   8.2  

>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 59.3 bits (137), Expect = 5e-10
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
 Frame = +3

Query: 357 SLTETLGIES---HAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGS 527
           S  E+LGI++   + G+  V++  + +++FW+F   +  E  PV+LWL GGPG +  +G 
Sbjct: 576 SKPESLGIDTVKQYTGYLDVED--DRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGL 633

Query: 528 LRKSGR*S-QARTVLPKESIIG-AKNYHLIFIDNPVGTGFSFTD 653
             + G  S    T+ P+ +      N  +IF+D P+ TGFS  D
Sbjct: 634 FMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFSNGD 677


>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 510

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +3

Query: 387 HAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG--R*SQAR 560
           HAG     ++ + +++FW F  +        +LWL GGPG +   GSL + G  R     
Sbjct: 46  HAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNN 105

Query: 561 TVLPKESIIGAKNYHLIFIDNPVGTGFSFT 650
           T             +L+F+D P+GTG+S++
Sbjct: 106 TFQLNPGRWDELG-NLLFVDQPLGTGYSYS 134


>SPAC1296.03c |sxa2||serine carboxypeptidase
           Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
 Frame = +3

Query: 381 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG--R*SQ 554
           E ++G+   +   + ++++ Y P +  +E    ++WLQGGPG A   G   ++G    SQ
Sbjct: 73  ELYSGYLEANS--DKSLFYTYAPAVVDSET--FIVWLQGGPGCAGTLGFFSENGPIEISQ 128

Query: 555 ARTVLPKESIIGAKNY-HLIFIDNPVGTGFS 644
           + +  P  +     N+ +++++D P GTG+S
Sbjct: 129 S-SPSPSLNPESWTNFANMLWLDQPFGTGYS 158


>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 926

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = +1

Query: 385 VTRDSLQLTRSSIQICTFGISRLYRRTKLHRFCCGCKEVPGQLLIRALYGSRAADRKQGR 564
           V   +L LT + +Q  +FG+  +   T +H+F    K+   QLLI A   +  AD K GR
Sbjct: 794 VLPSALNLTSALLQ--SFGLYLV--DTHIHQFLYIGKDAVPQLLIDAFGVNSLADLKAGR 849

Query: 565 F 567
           F
Sbjct: 850 F 850


>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 709

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 25/92 (27%), Positives = 46/92 (50%)
 Frame = -3

Query: 549 ISGPTSVKSPNKELPRDLLAATAKPVQLRSSIKAGNTKSTYLN*TSRQL*RIPRDSRSQV 370
           IS PT+++S    LP  LL    K   + +   +G T + YL    ++L R+P++  ++ 
Sbjct: 159 ISAPTAIQSCC--LPA-LLNTDDKDAFIEAQTGSGKTLA-YLLPIVQRLIRLPKNLHTRT 214

Query: 369 FPSMTLLIVPGRGLWTRF*EMASA*EDPPLSH 274
                +++ P R L  +   +A+   + PLSH
Sbjct: 215 SGIYAVIMAPTRELCQQIYNVANKLNNNPLSH 246


>SPBC6B1.04 |mde4||monopolin-like complex subunit
           Mde4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 421

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 267 RPNDSAGDPLMLTPFLKNESIAL 335
           +PN ++G PL +TPFL+  S ++
Sbjct: 263 QPNATSGSPLSVTPFLQKTSTSI 285


>SPCC1281.07c |||glutathione S-transferase Gst3|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 313

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 267 RPNDSAGDPLMLTPFLKN 320
           + NDS GDPL  +P+L+N
Sbjct: 86  KENDSTGDPLYNSPYLRN 103


>SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner
           membrane translocase Oxa101|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 374

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 177 RSAVCFVFFYFVPAERR*ISECLSTSKLDARPNDSAGDPLMLTPFLKNESIALAQELSRV 356
           +SAV F FFY +    R   +  +T  L    + S  DP  + P +    +    +++R 
Sbjct: 169 QSAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCILPIINAGLMFSGMQMNRA 228

Query: 357 SLTETLG 377
           +   T+G
Sbjct: 229 NTASTIG 235


>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 891

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +1

Query: 421 IQICTFGISRLYRR-TKLHRFC 483
           I+I  FG+S LYRR ++L  FC
Sbjct: 280 IKIIDFGLSNLYRRQSRLRTFC 301


>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 509 SSLFGLFTEVGPLIASKDGFAKREYHWG*ELSPDFHRQPRG 631
           SSLF  F  V PLI+ +     R  +    L+ DF R+P G
Sbjct: 815 SSLFSSFNSVNPLISLEPNPLNRTLNNSVNLT-DFGRKPNG 854


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 187 CVLFFSTLFPLNGAKFPNVYPRVSWTLDLMTQRGILS 297
           CV   STL+P+     P +Y       DL +QR  L+
Sbjct: 293 CVEVVSTLYPVLSIICPTLYSVYKDIFDLFSQRSFLA 329


>SPBC215.15 |sec13||COPII-coated vesicle component
           Sec13|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 25.4 bits (53), Expect = 8.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 214 PLNGAKFPNVYPRVSWTL 267
           PL   KFP++  RVSW+L
Sbjct: 248 PLTEEKFPDIAWRVSWSL 265


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,858,004
Number of Sequences: 5004
Number of extensions: 58243
Number of successful extensions: 173
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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