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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0037
         (809 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom...   130   2e-31
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p...   130   2e-31
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p...   107   1e-24
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb...   107   1e-24
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po...    99   4e-22
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p...    88   2e-18
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|...    66   6e-12
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||...    63   4e-11
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr...    60   5e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch...    58   1e-09
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||...    54   3e-08
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr...    50   4e-07
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||...    49   9e-07
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||...    47   3e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch...    46   5e-06
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||...    44   2e-05
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch...    40   3e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch...    40   6e-04
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c...    27   2.4  
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma...    27   3.2  
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S...    27   3.2  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        26   5.5  
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa...    26   5.5  
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa...    26   7.3  
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch...    25   9.6  
SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ...    25   9.6  

>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 202

 Score =  130 bits (315), Expect = 2e-31
 Identities = 58/65 (89%), Positives = 62/65 (95%)
 Frame = +2

Query: 62  IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
           +R+KLVIVGDGACGKTCLLIVFSK  FPEVYVPTVFENYVAD+EVDG+ VELALWDTAGQ
Sbjct: 5   LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQ 64

Query: 242 EDYDR 256
           EDYDR
Sbjct: 65  EDYDR 69



 Score =  103 bits (248), Expect = 2e-23
 Identities = 46/76 (60%), Positives = 58/76 (76%)
 Frame = +1

Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMK 456
           D+ VIL+CF+VDSPDSL+N+ EKW  EV HFC ++PI+LV  K DLRNDP  I EL K  
Sbjct: 77  DSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRNDPKIIEELSKTN 136

Query: 457 QEPVKPQEGRAMAEKI 504
           Q PV  +EG+A+A+KI
Sbjct: 137 QHPVTTEEGQAVAQKI 152



 Score = 49.6 bits (113), Expect = 5e-07
 Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 9/48 (18%)
 Frame = +3

Query: 510 FAYLECSAKSKEGVREVFETATRAAL-----QVK----KKKKTRCSLL 626
           + YLECSAK+ EGVREVFE+ATRAA+     +VK     KKK RC LL
Sbjct: 155 YKYLECSAKTNEGVREVFESATRAAMLKHKPKVKPSSGTKKKKRCILL 202


>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score =  130 bits (314), Expect = 2e-31
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = +2

Query: 62  IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
           +R+KLVIVGDGACGKTCLLIVFSK  FPEVYVPTVFENYVAD+EVDG+ +ELALWDTAGQ
Sbjct: 5   LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQ 64

Query: 242 EDYDR 256
           EDYDR
Sbjct: 65  EDYDR 69



 Score =  105 bits (252), Expect = 7e-24
 Identities = 45/76 (59%), Positives = 60/76 (78%)
 Frame = +1

Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMK 456
           D+ V+L+CFSVD+P+SL+N+ EKW  EV HFC N+PI+LVG K DLRNDP TI EL K  
Sbjct: 77  DSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRNDPKTIEELSKTS 136

Query: 457 QEPVKPQEGRAMAEKI 504
           Q+P+  +EG+ +A+KI
Sbjct: 137 QKPITFEEGQVVAQKI 152



 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 25/46 (54%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
 Frame = +3

Query: 510 FAYLECSAKSKEGVREVFETATRAAL-------QVKKKKKTRCSLL 626
           + YLECSAK  EGV EVFETA RA++         K KKK  C LL
Sbjct: 155 YKYLECSAKLNEGVNEVFETAARASMLKFKPASVPKTKKKKHCILL 200


>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 203

 Score =  107 bits (258), Expect = 1e-24
 Identities = 50/75 (66%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = +2

Query: 38  ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQV 211
           + SG  +   KKLV+VGDG CGKTCLLIVFS   FPE YVPTVFENY+ DI    + K +
Sbjct: 5   KKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVI 64

Query: 212 ELALWDTAGQEDYDR 256
           ELALWDTAGQE+YDR
Sbjct: 65  ELALWDTAGQEEYDR 79



 Score = 86.2 bits (204), Expect = 5e-18
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = +1

Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMK 456
           +++VIL+CFS+D P SL N+ EKW PEV+HFCP  PI+LVG K DLR D      LR   
Sbjct: 87  NSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDRNATEVLRTQG 146

Query: 457 QEPVKPQEGRAMAEKINGLHI 519
             PV  Q+ +++A  +N  ++
Sbjct: 147 LTPVTYQQAQSVALSMNAPYV 167



 Score = 31.5 bits (68), Expect = 0.15
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQVKKK---KKTRCSLL 626
           Y+ECSAK   GV EVF+ A    L +KK     K  C +L
Sbjct: 166 YVECSAKENTGVNEVFQLA--VGLTIKKSFSFSKKSCVIL 203


>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score =  107 bits (258), Expect = 1e-24
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = +2

Query: 62  IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
           IR+KLV+VGDGACGKT LL VF+   FP  YVPTVFENYV+D  VDGK V+LALWDTAGQ
Sbjct: 7   IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQ 66

Query: 242 EDYDR 256
           E+Y+R
Sbjct: 67  EEYER 71



 Score = 88.2 bits (209), Expect = 1e-18
 Identities = 38/73 (52%), Positives = 51/73 (69%)
 Frame = +1

Query: 286 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 465
           +IL+ F++DSPDSLEN+  KW  E+   CPNVP ILVG K DLR+DP  I E+R+  Q  
Sbjct: 82  IILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPVAIEEMRRRNQNF 141

Query: 466 VKPQEGRAMAEKI 504
           VK Q+   +A++I
Sbjct: 142 VKSQQAELVAQRI 154



 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQVK----KKKKTRCSLL 626
           Y+ECS+ + +GV +VFE ATRAAL V+     K  T+C ++
Sbjct: 159 YMECSSLTGDGVDDVFEAATRAALTVRDSENDKSSTKCCII 199


>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 205

 Score =   99 bits (238), Expect = 4e-22
 Identities = 43/65 (66%), Positives = 54/65 (83%)
 Frame = +2

Query: 62  IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
           I +K+VI+GDGA GKT LL VF+K  FP+VY PT+FENY+ DI VDG  +EL+LWDTAGQ
Sbjct: 12  IYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQ 71

Query: 242 EDYDR 256
           E+YD+
Sbjct: 72  EEYDQ 76



 Score = 67.7 bits (158), Expect = 2e-12
 Identities = 36/79 (45%), Positives = 49/79 (62%)
 Frame = +1

Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMK 456
           DT VI++CF+VDS DSLEN+  KW PEV   CP V ++LV  K DLR      +E +   
Sbjct: 84  DTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRG----ADEEQVDH 139

Query: 457 QEPVKPQEGRAMAEKINGL 513
            + +  +EG A A+KIN +
Sbjct: 140 SKIIDYEEGLAAAKKINAV 158



 Score = 33.5 bits (73), Expect = 0.036
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQVKKK 602
           YLECSAK   GV E F  A R AL  + +
Sbjct: 160 YLECSAKLNRGVNEAFTEAARVALAAQPR 188


>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 192

 Score = 87.8 bits (208), Expect = 2e-18
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = +1

Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQ 459
           TDV L+CFSV SP S EN+ EKW PEV H CP VP ++VG + DLR+DP+   +L +  Q
Sbjct: 75  TDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPSVQQKLARQHQ 134

Query: 460 EPVKPQEGRAMAEKINGL 513
            P+  ++G  +A ++  +
Sbjct: 135 HPLTHEQGERLARELGAV 152



 Score = 83.4 bits (197), Expect = 3e-17
 Identities = 36/62 (58%), Positives = 46/62 (74%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
           K V+VGDGA GKTCLLI ++ ++FP  YVPTVF+NY   + +  +   L L+DTAGQEDY
Sbjct: 5   KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDY 64

Query: 251 DR 256
           DR
Sbjct: 65  DR 66



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 18/39 (46%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQ--VKKKKKTRCSLL 626
           Y+ECSA +++G++ VF+ A  AAL   V  KKK++C +L
Sbjct: 154 YVECSALTQKGLKNVFDEAIVAALDPPVPHKKKSKCLVL 192


>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 200

 Score = 66.1 bits (154), Expect = 6e-12
 Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
           KL+++GD   GK+CLL+ FS+D F   ++ T+  ++ +  IE+DGK+++L +WDTAGQE 
Sbjct: 11  KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70

Query: 248 Y 250
           +
Sbjct: 71  F 71


>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 203

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 26/61 (42%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
           KL+++GD   GK+CLL+ F+ D + E Y+ T+  ++ +   E++GK V+L +WDTAGQE 
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69

Query: 248 Y 250
           +
Sbjct: 70  F 70


>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 208

 Score = 59.7 bits (138), Expect = 5e-10
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 247
           K+VI+GD   GKTCL+  F   +F   Y  T+  +++  D+ VD K V L LWDTAGQE 
Sbjct: 10  KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69

Query: 248 YDRCG 262
           +   G
Sbjct: 70  FQSLG 74



 Score = 26.6 bits (56), Expect = 4.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQ 590
           + E SAK    V ++FET +R AL+
Sbjct: 154 HFEASAKENTNVTDLFETVSRLALE 178


>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 219

 Score = 58.0 bits (134), Expect = 1e-09
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
           KLV+VGDG  GK+ L I   +  F + Y PT+ ++Y    E+DG+   L + DTAGQE+Y
Sbjct: 10  KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEY 69


>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 211

 Score = 53.6 bits (123), Expect = 3e-08
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
 Frame = +2

Query: 53  MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVD-GKQVELALW 226
           +  I +KLV++GD A GK+ L++ F KDQF +    T+   ++   + +D    V+L +W
Sbjct: 10  VVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIW 69

Query: 227 DTAGQEDY 250
           DTAGQE Y
Sbjct: 70  DTAGQERY 77



 Score = 25.4 bits (53), Expect = 9.6
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +3

Query: 453 EARACETAGRPGYG*KD*RFAYLECSAKSKEGVREVFETATRAALQVKKK 602
           E RA E A    Y   +    + E SAK+ E V E+F TA    L ++ K
Sbjct: 135 ERRAVEKADAEAYA-AEANLLFFETSAKTAENVNELF-TAIAKKLPLEDK 182


>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 201

 Score = 50.0 bits (114), Expect = 4e-07
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +2

Query: 59  AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDT 232
           ++RK KLV +G+ + GKT L+  F  DQF   Y  T+  ++++  + ++ + V L LWDT
Sbjct: 8   SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67

Query: 233 AGQEDY 250
           AGQE +
Sbjct: 68  AGQERF 73


>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 205

 Score = 48.8 bits (111), Expect = 9e-07
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 247
           K++I+G+   GKT ++  +   +F + Y  T+  +++  ++ VD K V L LWDTAGQE 
Sbjct: 10  KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69

Query: 248 YDRCG 262
           +   G
Sbjct: 70  FQSLG 74



 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 516 YLECSAKSKEGVREVFETATRAALQ 590
           Y E SAK    V+E FET  + AL+
Sbjct: 153 YFETSAKEAINVQEAFETVAKLALE 177


>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 214

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 247
           K V++GD   GK+ LL+ F++++F      T+   +   +I +D K+++  +WDTAGQE 
Sbjct: 12  KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71

Query: 248 Y 250
           Y
Sbjct: 72  Y 72


>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 185

 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 20/67 (29%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +2

Query: 53  MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 229
           MA I+ +++ ++G  + GK+ L + + ++ F E Y PT+   +  +I+  G++    + D
Sbjct: 1   MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60

Query: 230 TAGQEDY 250
           TAGQ++Y
Sbjct: 61  TAGQDEY 67



 Score = 25.8 bits (54), Expect = 7.3
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +1

Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINE 441
           ++ +S+ S  S E +       + H     VPI++VGNK DL    A   E
Sbjct: 82  VLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAE 132


>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 234

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 235
           K+V+ G    GK+CLL  F K+Q+ +    TV  ++ + I   G     K+++L +WDTA
Sbjct: 11  KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70

Query: 236 GQEDYDRCGRS 268
           GQE +    R+
Sbjct: 71  GQEKFRSVARN 81


>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 198

 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 247
           K+ ++GD + GKT L++ + +  F E    T+  N++   I +   ++  ++WD  GQ +
Sbjct: 12  KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71

Query: 248 Y 250
           +
Sbjct: 72  F 72


>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 216

 Score = 39.5 bits (88), Expect = 6e-04
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +2

Query: 71  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQE 244
           KLV+VGDG  GKT  +      +F + Y+ T+  E +      +  ++   +WDTAGQE
Sbjct: 11  KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +1

Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 417
           ++ F V S  + +N+P  W   V+  C N+PI+L GNK D++
Sbjct: 86  IIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCGNKVDVK 126


>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 625

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -3

Query: 234 AVSHRASSTCFPSTSMSAT*FSNTVGTYTSGN*SLLNTISR 112
           A S+ ++S  +PSTSMSA+  S    + TS + S  ++ SR
Sbjct: 500 ATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSR 540


>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 630

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK-KDLRN 420
           ++C       S E +   W P  +    NVPI+L  NK +DL N
Sbjct: 77  VICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDN 120


>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
           Vps33|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -2

Query: 232 GIPQSQFHLFSIHFDVGNVILKHCRHVYFRELILAEH 122
           G  QS+    +IH  +   +++H ++ YF++L+  +H
Sbjct: 325 GSLQSEHTSLNIHTGLAETLVQHTKNNYFQKLLQLQH 361


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 35   PESSGPMAAIRKK--LVIVGDGACGKTCLL 118
            P     +  I KK   ++VGD A GKTC+L
Sbjct: 1857 PVLESVITCINKKWPCILVGDTATGKTCIL 1886


>SPCC576.15c |ksg1||serine/threonine protein kinase
           Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 592

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = -3

Query: 324 RIRRVHREAH----EDHIRIWIRERPQRS*SSWPAVSHRASSTCFPSTSMSAT*FSNTV 160
           R R V    H    E   + W  E P    S+W  +  +ASS   P  + S T FS ++
Sbjct: 529 RCRMVKNNEHGWVVETPTKSWSFEDPNGPASAWVELLDKASSISLPFGNHSVTSFSRSI 587


>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 669

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 120 ISRHVLPHAPSPTITNFLRIAAIGPED 40
           I  H+LP+    TITNF R+   G  D
Sbjct: 188 IENHLLPNELPLTITNFFRLGTPGFTD 214


>SPAC25G10.08 |||translation initiation factor eIF3b
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 725

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 319 DSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 417
           DS E +   WTPE+ +    V +I + +K  +R
Sbjct: 367 DSKEQLLAYWTPEITNQPARVALISIPSKSTIR 399


>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
           Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 53  MAAIRKKLVIVGDGACGKT-CLLIVFSKDQFPEVYVPTVFENYVADIEV 196
           M    K L I+G    G T C   +FS++ +  ++     E ++ DIEV
Sbjct: 214 MHCFHKLLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEV 262


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,408,310
Number of Sequences: 5004
Number of extensions: 69083
Number of successful extensions: 251
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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