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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0034
         (698 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce...    58   2e-09
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces...    50   2e-07
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII...    48   2e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces...    48   2e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces...    46   5e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce...    45   1e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom...    44   2e-05
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ...    44   3e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch...    43   5e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce...    41   2e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc...    40   3e-04
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz...    31   0.16 
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces...    29   0.85 
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S...    27   2.0  
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ...    26   4.5  
SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    25   7.9  

>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 681

 Score = 57.6 bits (133), Expect = 2e-09
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
 Frame = +2

Query: 461 TSSRVKKTSKNSH*Q*PYVCEV--CDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAK 634
           +SS+ K  SK+   Q  YVC    C+K+F   ++LK H  THT  RP+ C +C K F  +
Sbjct: 556 SSSKAKSESKS---QGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQ 612

Query: 635 NVTSRYIQSTHTG*KTFMVV 694
           +   R+ +  HTG K F  V
Sbjct: 613 HDKRRH-EQLHTGIKAFACV 631



 Score = 43.6 bits (98), Expect = 3e-05
 Identities = 14/51 (27%), Positives = 29/51 (56%)
 Frame = +2

Query: 509 PYVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAKNVTSRYIQS 661
           P+ C +C K F  +   + H++ HTG + + C  C+++F   +  +R+ +S
Sbjct: 599 PFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649



 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 348 YVCEV--CQKGFTQMFYLKKHLRIISE-KLHNCEVCDKSFAQAVELKRHLRTHT 500
           YVC    C K FT+ + LK H+   +  +   C +C KSFA+  + +RH + HT
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT 623



 Score = 39.9 bits (89), Expect = 3e-04
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 315 SFKTRHNVMKPYVCEVCQKGFTQMFYLKKHLRI-ISEKLHNCEVCDKSFAQAVELKRHLR 491
           S    H   +P+ C +C+K F +    ++H ++    K   C  C++ FA+   L RH +
Sbjct: 589 SHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648

Query: 492 THTDNNLM 515
           +    N +
Sbjct: 649 SEVGQNCL 656



 Score = 29.1 bits (62), Expect = 0.64
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 444 CDKSFAQAVELKRHLRTHTDNNLMCVKYVIKSLC-*NGTSRYIKEHILVKDLMCV 605
           C+K F +A  LK H+ THT+          KS    +   R+ + H  +K   CV
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACV 631


>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 565

 Score = 50.4 bits (115), Expect = 2e-07
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
 Frame = +2

Query: 461 TSSRVKKTSKNSH*Q*PYVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEV--CDKKFVAK 634
           T+ +  +++KN     PY C +C K F    H   H RTHTGE+P+VC    C K+F   
Sbjct: 9   TTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRS 68

Query: 635 NVTSRYIQSTHT 670
           +  +R+ +  HT
Sbjct: 69  DELTRHAR-IHT 79



 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
 Frame = +3

Query: 342 KPYVCEVCQKGFTQMFYLKKHLRI-ISEKLHNCEV--CDKSFAQAVELKRHLRTHTDNN 509
           +PY C +C K F ++ +  +H+R    EK H C    C K F+++ EL RH R HT+ N
Sbjct: 24  RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNAN 82


>SPAC144.09c |sfc2||RNA polymerase III transcription factor
           TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 374

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
 Frame = +2

Query: 509 PYVCEV--CDKKFVLKWHLKVHQRTHTGERPYVC--EVCDKKFVAKNVTSRYIQ 658
           P+VC+   C K F  K HLK+H+R HT  +P+ C  + CD +F  +    R+I+
Sbjct: 52  PFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE 105



 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +2

Query: 509 PYVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEV--CDKKFVAKNVTSRYIQSTHTG*KT 682
           PY  E C KK+     L+ H RTH+ ERP+VC+   C K F  K+    + +  HT  K 
Sbjct: 26  PY--EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIH-KRCHTNVKP 82

Query: 683 F 685
           F
Sbjct: 83  F 83



 Score = 38.7 bits (86), Expect = 8e-04
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 342 KPYVC--EVCQKGFTQMFYLKKHLRIISE--KLHNCEVCDKSFAQAVELKRHLRTHT 500
           K Y C  E C+K FT+   LKKH+ +I E     +C+ C   F     L+RHL   T
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGT 290



 Score = 37.5 bits (83), Expect = 0.002
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = +2

Query: 509 PYVCEV--CDKKFVLKWHLKVHQRTHTGERPYVC--EVCDKKFVAKNVTSRYIQSTHT 670
           P+ C    CD +F  + HL+ H   H   +PY C  E CD+ F        +I + HT
Sbjct: 82  PFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHT 139



 Score = 35.1 bits (77), Expect = 0.010
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = +3

Query: 330 HNVMKPYVCEV--CQKGFTQMFYLKKHLRIISE-KLHNCEV--CDKSFAQAVELKRHLRT 494
           H+  +P+VC+   C K F +  +LK H R  +  K  +C    CD  F     L+RH+  
Sbjct: 47  HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEV 106

Query: 495 H 497
           H
Sbjct: 107 H 107



 Score = 33.5 bits (73), Expect = 0.030
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = +2

Query: 518 CEVCDKKFV----LKWHLKVHQRTHTGERPYVC--EVCDKKFVAKNVTSRYIQSTHTG*K 679
           C +C ++F     L+ H+ +HQ T    + Y C  E C K F   +   ++I   H G  
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265

Query: 680 TF 685
            F
Sbjct: 266 AF 267



 Score = 32.3 bits (70), Expect = 0.069
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = +3

Query: 345 PYVCEVCQKGFTQMFYLKKHLRIIS-EKLHNCEV--CDKSFAQAVELKRHLRTHTD 503
           PY  E C K +++   L++HLR  S E+   C+   C K+F +   LK H R HT+
Sbjct: 26  PY--EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79



 Score = 31.1 bits (67), Expect = 0.16
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +3

Query: 354 CEVCQKGFTQMFYLKKHL-----RIISEKLHNC--EVCDKSFAQAVELKRHLRTHTDNNL 512
           C +C + F    +L+ H+      +   K ++C  E C KSF ++  LK+H+    + N+
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265



 Score = 28.7 bits (61), Expect = 0.85
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 399 KHLRIISEKLHNC--EVCDKSFAQAVELKRHLRTHTDNNLMCVKY 527
           K+LR  ++K+ +C  E C K +++   L++HLRTH++       Y
Sbjct: 14  KNLRS-AKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDY 57


>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 897

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 527 CDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAKNVTSRYIQSTH 667
           C K F  K HL+ H+RTH   + + C  C++ F   +V +R++Q  H
Sbjct: 33  CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +3

Query: 363 CQKGFTQMFYLKKHLRIISE-KLHNCEVCDKSFAQAVELKRHL-RTHTDNNLMCVKYVIK 536
           C K FT+  +L++H R     K  +C  C+++FA++  L RH+ + H     +  + ++ 
Sbjct: 33  CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSERRMLN 92

Query: 537 SLC 545
           + C
Sbjct: 93  ASC 95


>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 567

 Score = 46.0 bits (104), Expect = 5e-06
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
 Frame = +2

Query: 512 YVCEVCDKKFVLKWHLKVHQRTHTGERPYVC-EV------CDKKFVAKNVTSRYIQSTH 667
           YVCE C + F    HLK H R+HT E+P+ C E+      C ++F  +++  R+ Q  H
Sbjct: 70  YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 339 MKPYVCEVCQKGFTQMFYLKKHLRI-ISEKLHNCEVCD 449
           +K YVCE C + F ++ +LK+H+R   +EK   C   D
Sbjct: 67  VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 423 KLHNCEVCDKSFAQAVELKRHLRTHTD 503
           K + CE C ++FA+   LKRH+R+HT+
Sbjct: 68  KQYVCETCTRAFARLEHLKRHIRSHTN 94



 Score = 27.5 bits (58), Expect = 2.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 590 RPYVCEVCDKKFVAKNVTSRYIQSTHTG*KTF 685
           + YVCE C + F       R+I+S HT  K F
Sbjct: 68  KQYVCETCTRAFARLEHLKRHIRS-HTNEKPF 98


>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 533

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 22/50 (44%), Positives = 28/50 (56%)
 Frame = +2

Query: 509 PYVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAKNVTSRYIQ 658
           PY C++C   FV    LK H R H   RPYVCE C K+F   +  +R+ Q
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRHKQ 520



 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +2

Query: 512 YVC--EVCDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAKNVTSRYIQSTHTG 673
           YVC    C+K+   K++++ H +TH  +RPY C++C   FV  +   R+++    G
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498



 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +3

Query: 348 YVC--EVCQKGFTQMFYLKKHLRI-ISEKLHNCEVCDKSFAQAVELKRHLRTH 497
           YVC    C K   + + ++ H++  +S++ + C++C   F +  +LKRHLR H
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495



 Score = 38.7 bits (86), Expect = 8e-04
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 342 KPYVCEVCQKGFTQMFYLKKHLRIISE-KLHNCEVCDKSFAQAVELKRH 485
           +PY C++C+ GF +   LK+HLRI    + + CE C K F +   L RH
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518


>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 781

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 512 YVCEV--CDKKFVLKWHLKVHQRTHTGERPYVCEVCDKKFVAKNVTSRYIQSTH 667
           Y C+   C K F  K H + H R+HT  + ++C  C   F   +V +R++   H
Sbjct: 17  YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70



 Score = 26.6 bits (56), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 444 CDKSFAQAVELKRHLRTHTDN 506
           C KSF +    +RH R+HT++
Sbjct: 24  CTKSFTRKEHARRHFRSHTNS 44


>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 582

 Score = 43.6 bits (98), Expect = 3e-05
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query: 512 YVCEVCDKKFVLKWHLKVHQRT-HTGERPYVCEVCDKKF 625
           +VC  C KKF    HL+ H R+ HT E+P+VC +C K+F
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRF 460



 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +3

Query: 342 KPYVCEVCQKGFTQMFYLKKHLRII--SEKLHNCEVCDKSFAQAVELKRHLRTHTD 503
           K +VC  C K F +  +L++H+R +  SEK   C +C K F++   L++H R H +
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475



 Score = 33.1 bits (72), Expect = 0.039
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 584 GERPYVCEVCDKKFVAKNVTSRYIQSTHTG*KTFMVV 694
           G + +VC  C KKF       R+I+S HT  K F+ +
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI 455



 Score = 29.1 bits (62), Expect = 0.64
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 509 PYVCEVCDKKFVLKWHLKVHQRTHTGERP 595
           P+VC +C K+F  + +L+ H+R H    P
Sbjct: 451 PFVC-ICGKRFSRRDNLRQHERLHVNASP 478


>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 249

 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
 Frame = +2

Query: 512 YVCEV--CDKKFVL---KWHLKVHQRTHTGERPYVCEV--CDKKFVAKNVTSRYIQSTH 667
           Y CE   C +K ++   ++ L  H R+HTGE+P++C V  CD+ F   +  ++++++ H
Sbjct: 73  YTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131



 Score = 31.1 bits (67), Expect = 0.16
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
 Frame = +3

Query: 348 YVCEV--C-QKGFTQM--FYLKKHLRI-ISEKLHNCEV--CDKSFAQAVELKRHLRT 494
           Y CE   C +KG  Q   F L  HLR    EK   C V  CD+SF ++  L +H+RT
Sbjct: 73  YTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129



 Score = 31.1 bits (67), Expect = 0.16
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 330 HNVMKPYVCEV--CQKGFTQMFYLKKHLRIISE 422
           H   KP++C V  C + FT+   L KH+R + E
Sbjct: 100 HTGEKPFICSVPECDRSFTRSDALAKHMRTVHE 132


>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 428

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +2

Query: 512 YVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEV--CDKKFVAKNVTSRYIQSTH 667
           Y C  C + F  + H   H R+HTGE+P+ C    C K+F  ++   R+++ TH
Sbjct: 4   YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR-TH 56



 Score = 39.1 bits (87), Expect = 6e-04
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 339 MKPYVCEVCQKGFTQMFYLKKHLRI-ISEKLHNCEV--CDKSFAQAVELKRHLRTH 497
           MK Y C  C++ F +  +  +H+R    EK   C    C K F +  EL RH+RTH
Sbjct: 1   MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56


>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
           binuclear cluster type |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 522

 Score = 39.9 bits (89), Expect = 3e-04
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 512 YVCEVCDKKFVLKWHLKVHQRTHTGERPYVCEV--CDKKFVAKNVTSRY 652
           Y C  C + F     LK+H  +HTGERP+VC+   C K F  ++   R+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516



 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 509 PYVCEV--CDKKFVLKWHLKVHQRTH 580
           P+VC+   C K F ++ +++ HQR H
Sbjct: 495 PFVCDYAGCGKAFNVRSNMRRHQRIH 520


>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 900

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 342 KPYVCEVCQKGFTQMFYLKKHLRIISEK--LHNCEVCDKSFA 461
           +P+V   CQ  F +   L+K  ++ SEK  L  C++C  S+A
Sbjct: 847 EPFVLFPCQHAFHRSCMLEKTYKLASEKNILKECQLCGPSYA 888


>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 442

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 566 HQRTHTGERPYVCEVCDKKFVAKNVTSRYIQSTHT 670
           HQ      +PY CEVC K++  KN+       TH+
Sbjct: 389 HQGFVVENKPYRCEVCSKRY--KNLNGLKYHRTHS 421



 Score = 28.3 bits (60), Expect = 1.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 411 IISEKLHNCEVCDKSFAQAVELKRHLRTHT 500
           ++  K + CEVC K +     LK H RTH+
Sbjct: 393 VVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 342 KPYVCEVCQKGFTQMFYLKKH 404
           KPY CEVC K +  +  LK H
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH 417



 Score = 27.9 bits (59), Expect = 1.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +2

Query: 509 PYVCEVCDKKFVLKWHLKVHQRTHT 583
           PY CEVC K++     LK H RTH+
Sbjct: 398 PYRCEVCSKRYKNLNGLKYH-RTHS 421


>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 660

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +3

Query: 552 GTSRYIKEHILVKDLMCVKY--VIKSLWLKMSPQGTSKVHILVE 677
           G  +Y  + +       VK+   +K L L   P GT K H LVE
Sbjct: 201 GDIKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVE 244


>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 463

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +3

Query: 417 SEKLHNCEVCDKSFAQAVELKRHL--RTHTDN 506
           +E   NCEVC+K F        H+  + H DN
Sbjct: 66  AEFYQNCEVCNKKFYSEGAYSSHMASKKHRDN 97


>SPBC29A3.21 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 100

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 289 CQKRFTCISHLKHDTM**NLMFVKCAKKVLRK 384
           CQ RF   S+LKH+ +  N++F  C  + LR+
Sbjct: 57  CQ-RFLFSSNLKHNYVNLNIIFTSCIFRSLRE 87


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,891,885
Number of Sequences: 5004
Number of extensions: 60016
Number of successful extensions: 202
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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