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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0001
         (746 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo...    90   3e-19
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po...    83   5e-17
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch...    62   8e-11
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom...    50   5e-07
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ...    49   6e-07
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch...    49   6e-07
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo...    49   8e-07
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos...    48   1e-06
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S...    47   3e-06
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc...    40   4e-04
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce...    39   9e-04
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch...    38   0.001
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa...    38   0.002
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|...    37   0.004
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch...    37   0.004
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe...    36   0.005
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po...    36   0.008
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ...    34   0.025
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc...    32   0.100
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr...    32   0.100
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc...    31   0.23 
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||...    31   0.23 
SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity f...    29   0.70 
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces...    28   1.2  
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p...    27   2.1  
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos...    27   2.1  
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr...    27   3.8  
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|...    26   5.0  
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    26   5.0  
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo...    26   6.6  
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po...    26   6.6  
SPAC12B10.12c |rhp41|rhp4a|DNA repair protein Rhp41 |Schizosacch...    26   6.6  
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp...    26   6.6  
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce...    26   6.6  
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc...    26   6.6  
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce...    26   6.6  
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos...    26   6.6  
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    25   8.7  
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c...    25   8.7  
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||...    25   8.7  
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    25   8.7  

>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
            Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1530

 Score = 90.2 bits (214), Expect = 3e-19
 Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
 Frame = +2

Query: 185  TFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNG-STG 361
            ++++L Y +Q     + +L  + G    G+LTA++G SGAGK++LLN+LA     G  TG
Sbjct: 883  SWRNLNYDIQIKGEHRRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVVTG 942

Query: 362  LISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXX 541
             +  NG   D   F++ + Y+ Q+D+     TV EA+  +A L+  +             
Sbjct: 943  DMLVNGRGLD-STFQRRTGYVQQQDVHIGESTVREALRFSAALRQPASVPLSEKYEYVES 1001

Query: 542  IIQLLRLGKAR----NTATERLSGGERKRLSIGLELLNNPP-VIFLDEPTTGLDDVASST 706
            +I+LL +         T    L+  +RKR +IG+EL   P  ++FLDEPT+GLD  ++ +
Sbjct: 1002 VIKLLEMESYAEAIIGTPGSGLNVEQRKRATIGVELAAKPALLLFLDEPTSGLDSQSAWS 1061

Query: 707  CVSLLKRVARGGR 745
             V  L+++A  G+
Sbjct: 1062 IVCFLRKLADAGQ 1074



 Score = 37.9 bits (84), Expect = 0.002
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 14/182 (7%)
 Frame = +2

Query: 230 KIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGST--GLISTNGLPR-DLRQ 400
           K IL   +    +G+L  +LG  G+G S+ L  +    V+     G    +G+ + D+++
Sbjct: 174 KAILSHCHALANAGELVMVLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHYDGIDKADMKK 233

Query: 401 FRKMSR-YIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLL---RLG- 565
           F      Y  + D+  P +T  E +  AA  +  +               + L     G 
Sbjct: 234 FFPGDLLYSGENDVHFPSLTTAETLDFAAKCRTPNNRPCNLTRQEYVSRERHLIATAFGL 293

Query: 566 ------KARNTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKR 727
                 K  N     +SGGERKR++I       P +   D  T GLD   +   V++L+ 
Sbjct: 294 THTFNTKVGNDFVRGVSGGERKRVTISEGFATRPTIACWDNSTRGLDSSTAFEFVNVLRT 353

Query: 728 VA 733
            A
Sbjct: 354 CA 355


>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1396

 Score = 82.6 bits (195), Expect = 5e-17
 Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
 Frame = +2

Query: 182  ITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGST- 358
            + ++DL +TV    S K IL +++G  +   LTA+LG + +GKS LL IL+   + GS  
Sbjct: 758  LCWRDLNFTVVTKTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVE 817

Query: 359  GLISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXX 538
            G I+ +GL ++ +  RK   Y+ +  L     TV E + + A L+               
Sbjct: 818  GEITLSGL-KNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVE 876

Query: 539  XIIQLLRLGKARNTATERLSGG----ERKRLSIGLELLNNP-PVIFLDEPTTGLDDVASS 703
             +I  L LG+  +     +  G     ++ LSI +EL   P  ++ LDEP  GLD  ++ 
Sbjct: 877  YVIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAW 936

Query: 704  TCVSLLKRVARGG 742
              V +L+++AR G
Sbjct: 937  MLVCILQKLARSG 949



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 12/175 (6%)
 Frame = +2

Query: 236 ILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGY-----RVNGSTGLISTNGLPRDL-- 394
           +++  +G  + G    +LG  G+G S+LL  L G      R+NGS   +  +GL   +  
Sbjct: 91  LVKGFDGYLQPGSSLLVLGHEGSGGSTLLKALCGIVEENERLNGS---LHYDGLDYKIAH 147

Query: 395 RQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLR----L 562
            QF+    Y  +       ITV   +      +L +             I +++R    L
Sbjct: 148 SQFKADLSYCGEGHSKVATITVRRLLEFVCSCRLPASKYDHPRSHYIRRICEIIRDAFDL 207

Query: 563 GKARNTATERL-SGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLK 724
           G   N    R+ + G++ ++ +   +   P +   D      D ++    +S +K
Sbjct: 208 GDFYNHRILRVFNSGDQIKVDVAQTMCARPLIQCWDNNMRDFDSISVIDILSRIK 262


>SPCC663.03 |pmd1||leptomycin efflux transporter
            Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1362

 Score = 62.1 bits (144), Expect = 8e-11
 Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
 Frame = +2

Query: 182  ITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRV--NGS 355
            I F+ + ++    R  K+ LR LN   + GQ  A +G SG GKS+ + ++  +    NG+
Sbjct: 1119 IEFRQVEFSYPTRRHIKV-LRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCDNGA 1177

Query: 356  TGLISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXX 535
              +   N    ++  +RK    + QE  L    TV E + + A   +             
Sbjct: 1178 VLVDGVNVRDYNINDYRKQIALVSQEPTLYQG-TVRENIVLGASKDVSEEEMIEACKKAN 1236

Query: 536  XXIIQLLRLGKARNTATER----LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASS 703
                 +L L    NT   +    LSGG+++R++I   L+ NP ++ LDE T+ LD  +  
Sbjct: 1237 IHEF-ILGLPNGYNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEK 1295

Query: 704  TCVSLLKRVARG 739
                 L   ++G
Sbjct: 1296 VVQEALNAASQG 1307



 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
 Frame = +2

Query: 266 SGQLTAILGPSGAGKSSLLNILAGYR--VNGSTGLISTNGLPRDLRQFRKMSRYIMQEDL 439
           SG++TA++G SG+GKS+++ ++  +   + G   L   +    ++   R     + QE +
Sbjct: 447 SGKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLRTLNVASLRNQISLVQQEPV 506

Query: 440 LQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTATER--------- 592
           L    TV E ++      +                 +L        T  E+         
Sbjct: 507 LFA-TTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFIMTLPEQFSTNVGQRG 565

Query: 593 --LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKRVAR 736
             +SGG+++R++I   ++++P ++ LDE T+ LD  +       L   +R
Sbjct: 566 FLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDNASR 615


>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 736

 Score = 49.6 bits (113), Expect = 5e-07
 Identities = 47/168 (27%), Positives = 77/168 (45%)
 Frame = +2

Query: 236 ILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLPRDLRQFRKMS 415
           IL+ ++ D +      ++GP+GAGKS++L +L   +++ ++G++S +  PR LR      
Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIE-QLHPTSGIVSRH--PR-LRIAYFAQ 588

Query: 416 RYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTATERL 595
            ++   DL       L A+S  A    G G            +   L L K        L
Sbjct: 589 HHVDTLDLN------LNALSFLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMIT-----L 637

Query: 596 SGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKRVARG 739
           SGG++ R++     L NP ++ LDEPT  LD  +       +KR   G
Sbjct: 638 SGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRFQGG 685



 Score = 35.5 bits (78), Expect = 0.008
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +2

Query: 581 ATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           AT+  SGG R RLS+   L   P ++ LDEP+  LD
Sbjct: 351 ATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD 386


>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
            membrane transporter Hmt1|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 830

 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
 Frame = +2

Query: 230  KIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGY-RVNGSTGLISTNGLPRDLRQFR 406
            K +L  +N   + G++ A++G SG GKS+++ IL  +  VN  +  I    +        
Sbjct: 597  KPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSL 656

Query: 407  KMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTAT 586
            + S  ++ +D      T+L  +  A                     I     G       
Sbjct: 657  RSSIGVVPQDSTLFNDTILYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSRVGE 716

Query: 587  E--RLSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKRVARG 739
               +LSGGE++R+++   +L +P +I LDE T+ LD        + L R+A G
Sbjct: 717  RGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLASG 769


>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
           ATPase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 726

 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
 Frame = +2

Query: 221 RSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLP---RD 391
           R S  I  +L+ D   G   AI+ PSG GKS++  +L  +    S+G I  +G+     +
Sbjct: 494 RPSASIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAP-SSGKILADGVDISTYN 552

Query: 392 LRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKA 571
           + Q+R     + QE +L    T+ E ++                      ++        
Sbjct: 553 VHQWRSHFGLVGQEPVLFSG-TIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPEKWST 611

Query: 572 R-NTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVA 697
           +  T   +LSGG+++R++I   LL NP  + LDE T+ LD  A
Sbjct: 612 QVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEA 654


>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
            |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1336

 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
 Frame = +2

Query: 137  GRAHLSHLPQRPLVN-ITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKS 313
            G  H S   + PLV  I F  +++       + + L +++    + +  AI+G SG+GKS
Sbjct: 1083 GNLHKSGYLKFPLVGKIEFDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSGKS 1142

Query: 314  SLLNILAGYRVNGSTGLISTNGLPR---DLRQFRKMSRYIMQEDLLQPFITVLEAMSMAA 484
            +L+ +L   R    +  I  +G P    D     K    + Q+  L    T+LE++    
Sbjct: 1143 TLVELL---RKTYPSEDIYIDGYPLTNIDTNWLLKKVAIVDQKPHLLGS-TILESLLYGV 1198

Query: 485  DLKLGSGXXXXXXXXXXXXIIQLLR-LGKARNTATERLSGGERKRLSIGLELLNNPPVIF 661
            D  + S             I  L   L       ++  SGG+ +RL+    LL NP ++ 
Sbjct: 1199 DRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFARALLRNPRLLI 1258

Query: 662  LDEPTTGLDDVAS 700
            LDE T+ LD  +S
Sbjct: 1259 LDECTSALDSKSS 1271



 Score = 46.0 bits (104), Expect = 6e-06
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
 Frame = +2

Query: 269 GQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLPR---DLRQFRKMSRYIMQEDL 439
           G+L  I+GPSG+GKS+ +++L  Y  + + G I  +  P    D          + Q+ +
Sbjct: 462 GELVHIIGPSGSGKSTFISLLLRY-FSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPV 520

Query: 440 LQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTATERLSGGERKRL 619
           +   +T+ E + M  +    S                              LSGG+++R+
Sbjct: 521 IFD-MTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASLSGGQQQRI 579

Query: 620 SIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKRVARG 739
           ++   LL +  ++ LDEPT+ LD +  +  +  ++   +G
Sbjct: 580 ALARALLRDTEILILDEPTSALDPITKNLVMDAIRAHRKG 619


>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
           Caf16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 280

 Score = 48.0 bits (109), Expect = 1e-06
 Identities = 49/183 (26%), Positives = 82/183 (44%)
 Frame = +2

Query: 176 VNITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGS 355
           + +T  +L+YT        + L  +  D   G  T ++G +GAGKS+LL +L+G  +   
Sbjct: 1   MEVTVSNLSYTFSP--KQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSL-AK 57

Query: 356 TGLISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXX 535
            G IS  G     R+      Y+  E +  P I     MS+A   +L +           
Sbjct: 58  AGHISVGGKD-PFRESSSAFVYLGTEWVNNPVIH--RDMSVA---RLIASVGGDKFAERR 111

Query: 536 XXIIQLLRLGKARNTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVS 715
             +I +L +          +S GER+R+ + + LL    V+ LDE T  LD +A +  ++
Sbjct: 112 DFLISILDIDL--RWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLARADLLN 169

Query: 716 LLK 724
            L+
Sbjct: 170 FLQ 172


>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
           Atm1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 693

 Score = 46.8 bits (106), Expect = 3e-06
 Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 4/174 (2%)
 Frame = +2

Query: 179 NITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG-YRVNGS 355
           +I F ++ ++    R    IL   + +  +G   A +G SG GKS++L +L   Y  +  
Sbjct: 442 SIQFDNVHFSYNPNRP---ILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSG 498

Query: 356 TGLISTNGLPR-DLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXX 532
             LI    L +  L   RK    + Q+  L    T+L  +                    
Sbjct: 499 KILIDNQRLDQITLNSLRKAIGVVPQDTPLFND-TILYNIGYGNPKASNDEIVEAAKKAK 557

Query: 533 XXXIIQLLRLGKARNTATERL--SGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
              II+    G         L  SGGE++RL++   LL NP ++F DE T+ LD
Sbjct: 558 IHDIIESFPEGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALD 611


>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
            |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 822

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
 Frame = +2

Query: 170  PLVNITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVN 349
            P   I FQD+++    G +   I   LN         A++GP+GAGK++L+ ++   +V 
Sbjct: 590  PSPAIKFQDVSFNYPGGPT---IFSKLNFGLDLKSRVALVGPNGAGKTTLIKLIL-EKVQ 645

Query: 350  GSTG-LISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXX 526
             STG ++  +GL   L  F +        D L   ++ +E +      K G+        
Sbjct: 646  PSTGSVVRHHGL--RLALFNQ-----HMGDQLDMRLSAVEWLR----TKFGN----KPEG 690

Query: 527  XXXXXIIQLLRLGKARNTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
                 + +    GK++     +LS G+R+R+      +  P ++ LDEPT  LD
Sbjct: 691  EMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEPTNALD 744



 Score = 34.3 bits (75), Expect = 0.019
 Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
 Frame = +2

Query: 230 KIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILA-GYRVNGST---GLISTNGLPRDL- 394
           K++++    +  +G+   ++ P+G+GKS+LL+ +A G     S+    L+    +P +L 
Sbjct: 288 KLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELT 347

Query: 395 ---------RQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXII 547
                     Q RK    +M++ L  P    +E  ++   L   +             I+
Sbjct: 348 CVEAVLDINEQERKHLEAMMEDLLDDPDKNAVELDTIQTRL---TDLETENSDHRVYKIL 404

Query: 548 QLLRL-GKARNTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           + L+   +     T  LSGG R R+++   L   P ++ LDEPT  LD
Sbjct: 405 RGLQFTDEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLD 452


>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 496

 Score = 38.7 bits (86), Expect = 9e-04
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +2

Query: 263 RSGQLTAILGPSGAGKSSLLNILAGYRVN 349
           R G   AILGPS AGKSSL+N+LA  R++
Sbjct: 237 RKGINVAILGPSNAGKSSLINLLANRRIS 265


>SPCC417.08 |tef3||translation elongation factor
           eEF3|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1047

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
 Frame = +2

Query: 227 SKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLPRDLRQFR 406
           +KI+L       + G+   + GP+G+GKS+L+  +   +V G    + T  +  D+ +  
Sbjct: 446 AKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQVEGFPTHLRTVYVEHDIDESE 505

Query: 407 KMSRYIMQEDLLQ-PFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTA 583
             +  +  + +LQ P + + +   +   LK  S               +L+      N  
Sbjct: 506 ADTPSV--DFILQDPAVPIKDRDEIVKALKENSFTD------------ELI------NMP 545

Query: 584 TERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDV 694
              LSGG + +L++   +  NP ++ LDEPT  LD V
Sbjct: 546 IGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDVV 582



 Score = 32.3 bits (70), Expect = 0.076
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 164 QRPLVNITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG 337
           QR ++ +      Y      +SK  L  ++         A++GP+GAGKS+L+ +L G
Sbjct: 669 QRAIIKVQHMSFQYP----GTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTG 722



 Score = 29.5 bits (63), Expect = 0.53
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 593 LSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           LSGG++ +L +       P VI LDEPT  LD
Sbjct: 904 LSGGQKVKLVLAACTWLRPHVIVLDEPTNYLD 935


>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 618

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
 Frame = +2

Query: 230 KIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG----YRVNGSTGLISTNGLPRDLR 397
           ++++ +   +   GQ   +LG +G+GKS+ L  +A     Y  +  + L++    P D+ 
Sbjct: 88  RLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHIDSYLLNAEAEPSDVN 147

Query: 398 QFRKMSRYIMQ--EDLLQPFITVLEAMSMAADL-------KLGSGXXXXXXXXXXXXIIQ 550
                  YI+Q  +D +Q     +E +S A D+       K                 + 
Sbjct: 148 AVD----YIIQSAKDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMI 203

Query: 551 LLRLGKARNTA---TERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           L  LG  +      T+ +SGG R R+++   L   P ++ LDEPT  LD
Sbjct: 204 LHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLD 252



 Score = 37.5 bits (83), Expect = 0.002
 Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 1/188 (0%)
 Frame = +2

Query: 182 ITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGSTG 361
           I F D+ ++   G     + R L+         AI+G +G GKS+LLN++ G  +     
Sbjct: 388 IAFNDVAFSYD-GNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGN 446

Query: 362 LISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXX 541
           +   +GL        KM++Y        P+    +   +   +                 
Sbjct: 447 VSRYSGL--------KMAKYSQHSADQLPY----DKSPLEYIMDTYKPKFPERELQQWRS 494

Query: 542 IIQLLRLGKARNTATER-LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSL 718
           ++    L     T+  R LS G + R+      L  P ++ LDEPT  L D+ S   ++ 
Sbjct: 495 VLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHL-DITSIDALAK 553

Query: 719 LKRVARGG 742
              V  GG
Sbjct: 554 AINVWTGG 561


>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
            Abc4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1469

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
 Frame = +2

Query: 239  LRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG-YRVN-GSTGLISTNGLPRDLRQFRKM 412
            LR LN  F   +L+ ++GP+G+GKSSL++ L G   +N GS  L  + G+   + Q   +
Sbjct: 631  LRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSY-VSQVPWL 689

Query: 413  SRYIMQEDLL--QPFI-----TVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKA 571
                +++++L   P+I      V++A  +  DL+                   L  +G+ 
Sbjct: 690  RNATIRDNILFDYPYIEERYKKVIQACGLLTDLQ-------------SFVASDLTEIGEK 736

Query: 572  RNTATERLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
              T    LSGG+++R+++   + +   ++ +D+  + LD
Sbjct: 737  GVT----LSGGQKQRIALARAVYSPTSIVLMDDVFSALD 771


>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 487

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +2

Query: 593 LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLL 721
           LS G+ +R  +  +L+  P ++ LDEP  GLD  + S   SLL
Sbjct: 149 LSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLL 191


>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1465

 Score = 36.3 bits (80), Expect = 0.005
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +2

Query: 239 LRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG--YRVNGS 355
           LR +N   ++G+LT I G  GAGKSSLL    G  Y+ +GS
Sbjct: 597 LRQINFVAKNGELTCIFGKVGAGKSSLLEACMGNMYKNSGS 637



 Score = 26.2 bits (55), Expect = 5.0
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +2

Query: 593 LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLL 721
           LSGG++ R+S+   + +   +  LD+  + +D   S   +  L
Sbjct: 704 LSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNL 746


>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1057

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +2

Query: 593  LSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
            LSGG++ ++ I   L NNP ++ LDEPT  LD
Sbjct: 911  LSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942



 Score = 32.3 bits (70), Expect = 0.076
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +2

Query: 281 AILGPSGAGKSSLLNILAG 337
           AILGP+GAGKS+L+ +L G
Sbjct: 723 AILGPNGAGKSTLIKVLIG 741



 Score = 31.1 bits (67), Expect = 0.17
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 593 LSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           LSGG + +L +   +L    ++ LDEPT  LD
Sbjct: 563 LSGGWKMKLELARAMLQKADILLLDEPTNHLD 594



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 230 KIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRV 346
           +++L   N     G    ++G +G GKS+LL  +  Y+V
Sbjct: 457 RLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYKV 495


>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1427

 Score = 33.9 bits (74), Expect = 0.025
 Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
 Frame = +2

Query: 173  LVNITFQDLTYTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNG 352
            L +++ ++LT +   G+++  +L  +N +    +  AI+G +G+GKS++   L  + +  
Sbjct: 1177 LGHVSIKNLTVSYSIGQAA--VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIM 1234

Query: 353  STGLISTNGLP---RDLRQFRKMSRYIMQEDLL---------QPFITVLEAMSMAADLKL 496
            S G +  +G+     DL   R+    I Q+ +L          PF    +   +   LK 
Sbjct: 1235 S-GAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDG-ELNEILKT 1292

Query: 497  GSGXXXXXXXXXXXXIIQLLRLGKARNTATERLSGGERKRLSIGLELLNNPPVIFLDEPT 676
             S                 + L    ++     S G+R+ L++   L+    ++ LDE T
Sbjct: 1293 ASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDEST 1352

Query: 677  TGLDDVASSTCVSLLK 724
              +DD        +L+
Sbjct: 1353 ASVDDTTDRRIQQMLR 1368


>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
            Abc2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1463

 Score = 31.9 bits (69), Expect = 0.100
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
 Frame = +2

Query: 203  YTVQAGRSSKIILRSLNGDFRSGQLTAILGPSGAGKSSLLNILAGYRV----NGSTGLIS 370
            Y+V+   +  ++L  ++ + +  +   I+G +GAGKS+L   LA +R+    +G   L  
Sbjct: 1229 YSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTL--TLALFRLIEPTSGDIQLDD 1286

Query: 371  TNGLPRDLRQFRKMSRYIMQEDLLQPFI-TVLEAMSMAADLKLGSGXXXXXXXXXXXXII 547
             N     L   R     I QE+  Q F  T+ E +   A+                   I
Sbjct: 1287 INITSIGLHDLRSRLAIIPQEN--QAFEGTIRENLDPNAN-ATDEEIWHALEAASLKQFI 1343

Query: 548  QLLRLGKARNTATE---RLSGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
            Q L  G   +  TE    LS G+R+ + +   LL    V+ LDE T  +D
Sbjct: 1344 QTLD-GGLYSRVTEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVD 1392



 Score = 29.1 bits (62), Expect = 0.70
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 239 LRSLNGDFRSGQLTAILGPSGAGKSSLLNILAG 337
           LR ++   R G+L  I+G  G GKSSLL    G
Sbjct: 599 LRDIDFVARRGELCCIVGKVGMGKSSLLEACLG 631


>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 593

 Score = 31.9 bits (69), Expect = 0.100
 Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 9/151 (5%)
 Frame = +2

Query: 263 RSGQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLPRDLRQFR--KMSRYIMQ-- 430
           R GQ+  ++G +G GKS+ L IL+G          +       ++ FR  ++  +  +  
Sbjct: 101 RPGQVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVV 160

Query: 431 ED----LLQP-FITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARNTATERL 595
           ED    L++P ++  +       D  +               ++    L    N     L
Sbjct: 161 EDNIKALIKPQYVDHIPRAIKTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHL 220

Query: 596 SGGERKRLSIGLELLNNPPVIFLDEPTTGLD 688
           SGGE +R +I         V   DEP++ LD
Sbjct: 221 SGGELQRFAIAAVATQKADVYMFDEPSSYLD 251



 Score = 28.7 bits (61), Expect = 0.93
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 593 LSGGERKRLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKR 727
           LSGGE +R++I L L     V  +DEP+  LD         +++R
Sbjct: 456 LSGGELQRVAICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRR 500


>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1233

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = +2

Query: 278 TAILGPSGAGKSSLLNILAGYRVNGSTGLISTN 376
           T+I+GP+GAGKS+L++ ++      S+ L STN
Sbjct: 28  TSIIGPNGAGKSNLMDAISFVLGVKSSHLRSTN 60


>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 331

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 16/61 (26%), Positives = 34/61 (55%)
 Frame = +2

Query: 284 ILGPSGAGKSSLLNILAGYRVNGSTGLISTNGLPRDLRQFRKMSRYIMQEDLLQPFITVL 463
           ++GPSG+GKS+L+N L    +  S G +      R   +    S+ +++E+ +Q  + ++
Sbjct: 37  VVGPSGSGKSTLINTLFSAHLMDSKGRLDYQAPYRQTTEIHVTSQ-VVRENRVQLQLNLI 95

Query: 464 E 466
           +
Sbjct: 96  D 96


>SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity
           factor complex subunit |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 456

 Score = 29.1 bits (62), Expect = 0.70
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 251 NGDFRSGQLTAILGPSGAGKSSLLNILAGYRVNGSTGLISTN 376
           N +   G    ++GP   GK+S+L IL  Y +  S   I  N
Sbjct: 100 NDESSYGPCVCLIGPRSCGKTSVLKILESYALKQSRHPICVN 141


>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 354

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 245 SLNGDFRSGQLTAILGPSGAGKS 313
           +L+G    GQLT I G SG+GKS
Sbjct: 85  TLHGGIPVGQLTEICGESGSGKS 107


>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1040

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -2

Query: 634 LQANR*SFSLPSRQSLGGCVPGFAESQQLNYFFHHNGFCLF 512
           + + R    LPS   L    P +  S  L  F HHN + +F
Sbjct: 224 MNSKRKKLELPSLPVLSTAGPSYTNSLALPPFHHHNNYKMF 264


>SPAC14C4.13 |rad17||RFC related checkpoint protein
           Rad17|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 606

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 257 DFRSGQLTAILGPSGAGKSSLLNILA 334
           D    +L  I GPSG GKS+ + +LA
Sbjct: 101 DSLESRLLLICGPSGCGKSTAVQVLA 126


>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 583

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +2

Query: 611 KRLSIGLELLNNPPV--IFLDEPTT 679
           KR+S+G+  ++NPPV  +  D PT+
Sbjct: 125 KRVSLGIPSISNPPVDTVISDSPTS 149


>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
           Orc4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 972

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +2

Query: 269 GQLTAILGPSGAGKSSLLNIL---AGYRVNGSTGLISTNGLPR--DLRQFRKMSRYIMQE 433
           G    I+GP G+GKS L++ +   A   +N  + ++  NG  +  D    R++SR +  E
Sbjct: 575 GNSVIIVGPRGSGKSVLVDDILSRAAQEINEKSYVVRLNGTYQTDDKLALREISRQLSIE 634


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 625 NR*SFSLPSRQSLGGCVPGFAESQQLNYFFHHNG 524
           +R S+  P    LGG   G   S  L   FHH G
Sbjct: 151 SRPSYVAPVAAGLGGLALGGLASHALGNLFHHRG 184


>SPAC3A11.02 |cps3|mug188|zinc finger protein
           Cps3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 583

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 339 TGLTGRPA*SPPMDCLATFGNSGRCPGTSCRRIYCSPSSL 458
           TG  GRP  SP +        S + PG +   +  +PSSL
Sbjct: 315 TGNLGRPTKSPSVPTSVGSNKSRKFPGINGSTLTATPSSL 354


>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 449

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 260 FRSGQLTAILGPSGAGKSSLLNILAG 337
           +R G L  + GP G+GK+S L  LAG
Sbjct: 241 YRRGYL--LYGPPGSGKTSFLYALAG 264


>SPAC12B10.12c |rhp41|rhp4a|DNA repair protein Rhp41
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 638

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 401 IAEGREAVHWWRSGRSTR*PCIPLKY 324
           ++ G  A HW+R GR  +    PLK+
Sbjct: 469 VSNGFSAEHWYRKGRIIKPGAQPLKH 494


>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
           Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 778

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 542 IIQLLRLGKARNTATERLSGGERKRLSIGLELLNNPPVI 658
           ++Q  RLGK ++T  +       +   I ++ LNN  VI
Sbjct: 423 VVQSTRLGKIKHTVVKTFRSTNEQLSLIAVDALNNDMVI 461


>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 2310

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 272 QLTAILGPSGAGKSSLLNILA 334
           Q+  + G  G+GKS+LLN +A
Sbjct: 380 QVVTVTGEKGSGKSNLLNAVA 400


>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
           Bms1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1121

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +2

Query: 275 LTAILGPSGAGKSSLLNIL----AGYRVNGSTGLIS 370
           + A++GP G GKS+L+  L    + Y ++  TG I+
Sbjct: 76  IVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPIT 111


>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 292

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 475 DGRRPEARVRGGERDKSRCGGRNN-SAVETRQSQEHSHRETVGRGE 609
           DGRR     +  ER  +R  GR+N S  E  +S +    E VG  E
Sbjct: 220 DGRRDRILKQAEERRSNRAVGRSNLSGREYFESNKDKTHEVVGDEE 265


>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
            Rad50|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1290

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +2

Query: 614  RLSIGLELLNNPPVIFLDEPTTGLDDVASSTCVSLLKRVAR 736
            RL++   L  N  ++ LDEPTT LD+   + C SL K ++R
Sbjct: 1195 RLALAECLGVNCGILALDEPTTNLDE--ENIC-SLAKNLSR 1232


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
            Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +2

Query: 419  YIMQEDLLQPFITVLEAMSMAADLKLGSGXXXXXXXXXXXXIIQLLRLGKARN 577
            YI+ ++LL+ F+T+ +  +  A    G              I  + +LG  RN
Sbjct: 2129 YILPQNLLRKFVTISDLRTQVAGYMYGKSPSDNPQIKEIRCIALVPQLGSIRN 2181


>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 708

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +1

Query: 454 HCAGGNVDGRRPEARVRGGERDKSRCGGRNNSAVETRQSQEHSHRETVGRGEKTIIYWPG 633
           H    +++ ++P    +  + D +   G NN+ +    SQE SH  T+ R E       G
Sbjct: 57  HSRSSSLESKKPSVASQDVKSDGTLPIGTNNNPLIPSHSQESSH-WTI-RHESMPSALAG 114

Query: 634 AA*QPACNFPRRTHN 678
           ++ Q    FP  T N
Sbjct: 115 SSAQSMQQFPSITQN 129


>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 469

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +2

Query: 284 ILGPSGAGKSSLLNIL 331
           +LG SG+GKS+L+N L
Sbjct: 100 VLGESGSGKSTLVNTL 115


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 311 SSLLNILAGYRVNGSTGLISTNGLPRDLRQFRKMS 415
           +SL   + G++ NGS G IS   L RDL  ++  S
Sbjct: 256 TSLFYGVVGHQ-NGSNGFISPKNLTRDLLNYKANS 289


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,294,250
Number of Sequences: 5004
Number of extensions: 71027
Number of successful extensions: 302
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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