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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060091.seq
         (626 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...   109   3e-25
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...   109   3e-25
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    89   4e-19
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    65   9e-12
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    54   2e-08
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    53   3e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    49   6e-07
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...    34   0.019
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    34   0.019
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...    34   0.019
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...    34   0.019
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    28   1.3  
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...    27   1.7  
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    27   1.7  
SPBC25H2.15 |||programmed cell death protein homolog|Schizosacch...    27   1.7  
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    26   3.9  
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    26   3.9  
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c...    26   3.9  
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar...    25   6.8  
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...    25   6.8  
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    25   9.0  
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl...    25   9.0  

>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score =  109 bits (262), Expect = 3e-25
 Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 LKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDG 430
           +KSTAIS+F E+ + D+      D +E ++   FL+NLIDSPGHVDFSSEVTAALRVTDG
Sbjct: 70  IKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDG 124

Query: 431 ALXVVDCVSGVCVQTETVLRQAXAER 508
           AL VVD + GVCVQTETVLRQA  ER
Sbjct: 125 ALVVVDTIEGVCVQTETVLRQALGER 150



 Score =  105 bits (251), Expect = 7e-24
 Identities = 48/70 (68%), Positives = 58/70 (82%)
 Frame = +3

Query: 48  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 227
           MV FT +E+R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 228 KDEQDRCITL 257
            DEQ+R +T+
Sbjct: 61  ADEQERGVTI 70



 Score = 37.1 bits (82), Expect = 0.002
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 508 LKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
           ++P++ +NK+DR            YQ F R+VE+VNV+I
Sbjct: 151 IRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVI 189


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score =  109 bits (262), Expect = 3e-25
 Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = +2

Query: 254 LKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEVTAALRVTDG 430
           +KSTAIS+F E+ + D+      D +E ++   FL+NLIDSPGHVDFSSEVTAALRVTDG
Sbjct: 70  IKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDG 124

Query: 431 ALXVVDCVSGVCVQTETVLRQAXAER 508
           AL VVD + GVCVQTETVLRQA  ER
Sbjct: 125 ALVVVDTIEGVCVQTETVLRQALGER 150



 Score =  105 bits (251), Expect = 7e-24
 Identities = 48/70 (68%), Positives = 58/70 (82%)
 Frame = +3

Query: 48  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 227
           MV FT +E+R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 228 KDEQDRCITL 257
            DEQ+R +T+
Sbjct: 61  ADEQERGVTI 70



 Score = 37.1 bits (82), Expect = 0.002
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 508 LKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
           ++P++ +NK+DR            YQ F R+VE+VNV+I
Sbjct: 151 IRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVI 189


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 89.4 bits (212), Expect = 4e-19
 Identities = 48/85 (56%), Positives = 63/85 (74%)
 Frame = +2

Query: 254 LKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 433
           +KS+AIS+FF++       I+  D++ + EK +LINLIDSPGHVDFSSEV++A R+ DGA
Sbjct: 70  MKSSAISLFFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLCDGA 121

Query: 434 LXVVDCVSGVCVQTETVLRQAXAER 508
             +VD V GVC QT TVLRQA  +R
Sbjct: 122 FVLVDAVEGVCSQTITVLRQAWIDR 146



 Score = 66.5 bits (155), Expect = 3e-12
 Identities = 30/64 (46%), Positives = 44/64 (68%)
 Frame = +3

Query: 66  DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 245
           +++  +   + NIRN +++AHVDHGK+TL DSL++  GII+   AG  RF D R+DE  R
Sbjct: 7   EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITR 66

Query: 246 CITL 257
            IT+
Sbjct: 67  GITM 70



 Score = 27.5 bits (58), Expect = 1.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 508 LKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVII 624
           +K IL +NKMDR            +    R+VE VN +I
Sbjct: 147 IKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVI 185


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 64.9 bits (151), Expect = 9e-12
 Identities = 33/59 (55%), Positives = 41/59 (69%)
 Frame = +2

Query: 317 NPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQ 493
           N  Q+   EK + IN+ID+PGH+DF+ EV  ALRV DGA+ V+  VSGV  QT TV RQ
Sbjct: 134 NEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQ 192



 Score = 35.1 bits (77), Expect = 0.008
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 54  NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGII 185
           N  + E     DKKR   IRN+ + AH+D GK+T T+ ++   G I
Sbjct: 41  NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRI 86


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 54.0 bits (124), Expect = 2e-08
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +2

Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
           K F    ID+PGHVDF  EV A + ++DG + VVD + GV + T  +++ A
Sbjct: 207 KTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHA 257


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 53.2 bits (122), Expect = 3e-08
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = +2

Query: 356 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLRQA 496
           INLID+PGH DF+ EV  ++ V DGA+ ++D  +GV  QT+ V +QA
Sbjct: 95  INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQA 141



 Score = 37.5 bits (83), Expect = 0.002
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +3

Query: 99  NIRNMSVIAHVDHGKSTLTDSLVSKAGI---IAGARAGETRFTDTRKDEQDRCITLN 260
           +IRN+ +IAH+D GK+TLT+ ++   G          G+T   D    E+ R IT+N
Sbjct: 27  SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDT-VMDYLPAERQRGITIN 82


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 48.8 bits (111), Expect = 6e-07
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +2

Query: 344 KGFLINLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           + +L+NLID+PGHVDF +EV  +L   +G + +VD   G+  QT
Sbjct: 122 QSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQT 165



 Score = 45.6 bits (103), Expect = 6e-06
 Identities = 24/62 (38%), Positives = 38/62 (61%)
 Frame = +3

Query: 72  IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCI 251
           +RG+   +  +RN +VIAH+DHGKSTL+D ++   G+I        +F D  + E+ R I
Sbjct: 50  VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106

Query: 252 TL 257
           T+
Sbjct: 107 TV 108


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +3

Query: 90  KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLN 260
           KK ++ N+  I HVDHGK+TLT ++      +  A   +    D   +E+ R IT++
Sbjct: 50  KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITIS 105



 Score = 31.9 bits (69), Expect = 0.078
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 365 IDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQT 475
           +D PGH D+   +       DGA+ VV    G   QT
Sbjct: 121 VDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQT 157


>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 84  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 179
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +3

Query: 111 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 212
           ++++ HVDHGK+TL D+   K+ I +    G T+
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQ 206



 Score = 25.4 bits (53), Expect = 6.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +2

Query: 356 INLIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLR 490
           I  +D+PGH+ F +       + D  + VV    GV  QT   ++
Sbjct: 222 ITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIK 266


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 368 DSPGHVDFSSEVTAALRVTDGALXVVD 448
           D+PGH DF S + A     D A+ VVD
Sbjct: 261 DAPGHRDFISGMIAGASSADFAVLVVD 287



 Score = 25.4 bits (53), Expect = 6.8
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
 Frame = +3

Query: 27  KNHKPSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII------- 185
           K   P+ +V+  V EI    + K  + ++ V  HVD GKST+   ++ + G I       
Sbjct: 155 KKQNPTDLVS--VPEIFEQSNPKPVV-HLVVTGHVDSGKSTMLGRIMFELGEINSRSMQK 211

Query: 186 ---AGARAGETRFT-----DTRKDEQDRCITLNLRPSLCSSSLK 293
                A +G+  F+     DT ++E+ R +T+++  +   S  K
Sbjct: 212 LHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKK 255


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 362 LIDSPGHVDFSSEVTAALRVTDGALXVVDCVSGVCVQTETVLR 490
           +ID+PGH  F++  +    + + A+ V+D + G+  QT   +R
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIR 595


>SPBC25H2.15 |||programmed cell death protein
           homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 396

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 16/82 (19%), Positives = 40/82 (48%)
 Frame = +3

Query: 102 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITLNLRPSLCS 281
           +++   I+H++  KS+  +  V+   I + +  G   F+D         ++ ++ PS  S
Sbjct: 112 VKSPKAISHLEEKKSSPKEKKVNPFAITSESSRGLNPFSDATSANNPFSLSTDVNPSKPS 171

Query: 282 SSLKRKI*YSSQTLTSVKRVRK 347
           S++  K  ++++   S+   +K
Sbjct: 172 SNVFSKPSFAAKAQQSITDQQK 193


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = -3

Query: 489 RSTVSVCTHTPDTQSTTXRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 310
           ++TVS  + +  T S++  +PS + +   TS   S+    S        S  S  S    
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183

Query: 309 NTKSFSSSSKN 277
           ++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSLVSKAGII 185
           N+  I HVD GKSTL  +++   G++
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV 265


>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 566

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 133 ITASQPSRTRWFPR-PVSLLAREPERPVSLTRVRTNK 240
           +T    S T + P  P S + REP  P+S  R+R+++
Sbjct: 48  LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84


>SPBC19F5.03 |||inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 104 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQL 9
           D P + +H  D  ++E  H RW  + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348


>SPCC1235.05c |fft2||fun thirty related protein
           Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 99  SASCPSSHGSRLP*NSPF*MVYDFCSIK 16
           +ASCP SH   L  + PF  + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 108 NMSVIAHVDHGKSTLTDSL 164
           N+  I HV HGKST+  ++
Sbjct: 25  NIGTIGHVAHGKSTVVKAI 43


>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
           endonuclease Cce1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 258

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 348 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDL 256
           P S +S W+  V+NTK SFS     ++M  +L
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKEL 198


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,409,274
Number of Sequences: 5004
Number of extensions: 45451
Number of successful extensions: 167
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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