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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0030
         (588 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    29   0.50 
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    29   0.50 
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr...    28   0.88 
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ...    28   0.88 
SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual    28   0.88 
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...    27   2.7  
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    26   3.5  
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory...    26   3.5  
SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyce...    26   3.5  
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ...    26   4.7  
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ...    25   6.2  
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos...    25   6.2  
SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces...    25   6.2  
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz...    25   6.2  
SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr 1|||Ma...    25   6.2  
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom...    25   6.2  
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    25   8.2  
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ...    25   8.2  
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ...    25   8.2  

>SPBC23E6.09 |ssn6||transcriptional corepressor
           Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 29.1 bits (62), Expect = 0.50
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 3   SPTNTNMKTFVILFGLVTVAVAAPQSPTEPIPILKQESSIEPDGSY 140
           S TN N+ T  ++   V V  AAP S T     + Q ++  P G +
Sbjct: 771 SVTNNNVATQPVIASTVPVQTAAPSSQTAVPQTIHQSNAFTPRGKH 816


>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 29.1 bits (62), Expect = 0.50
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +1

Query: 136 PTNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQART---VVLSSCPTSPMRTAS 306
           P +T ++   VS + +     T+++ +    +  +SS Q ++   +  SS  +SP  T S
Sbjct: 439 PASTRVQTTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSPQSTLS 498

Query: 307 SLRDHIYPHHPQFLKSSSALSHTSPPHPHS 396
           +  + +       L  SSA+  TS   P S
Sbjct: 499 TSSEVVSEVSSTLLSGSSAIPSTSSSTPSS 528



 Score = 26.6 bits (56), Expect = 2.7
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +1

Query: 166 VSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQF 345
           VS + S   S T++ ++ L     NSST A ++ LSS  +  + T+S+   +   H P  
Sbjct: 766 VSNISSNLPSATASSQSQL----TNSSTLATSLYLSSSSSRTISTSSTNEYNTSFHAPTV 821

Query: 346 LKSSSALSHTS 378
             ++S+ S TS
Sbjct: 822 SSTTSSSSTTS 832


>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1275

 Score = 28.3 bits (60), Expect = 0.88
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
 Frame = +1

Query: 172 PLPSEALSKTSALKNL----LYRL--KVNSSTQARTVVLSSCPTSPMRTASSLR----DH 321
           PLPS   S +S         LY L   ++ S      +  S   SP RT S +R    D 
Sbjct: 175 PLPSSVSSHSSPYSTTSSTSLYSLYNDISLSCSPEPYLPLSPTRSPARTPSPIRLYSSDA 234

Query: 322 IYPHHPQFLKSSSALSHTSPPHPHSLKT 405
           + P  P     S ++ + +PP+P+SLK+
Sbjct: 235 LRPQSPL----SPSVEYLTPPNPYSLKS 258


>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 245

 Score = 28.3 bits (60), Expect = 0.88
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 470 NSTRITELTLFLSKLTE*LWPVVFR 396
           N  RITE T  +  L   LWP+VFR
Sbjct: 61  NRNRITETTDVMRFLCRELWPIVFR 85


>SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 341

 Score = 28.3 bits (60), Expect = 0.88
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +1

Query: 130 MGPTNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASS 309
           +GP   L R +M+  L SE LS    +KN    +   +   A + + SS P+SP R  S+
Sbjct: 184 LGPGEILRRKDMLEQLGSEFLSFKRLVKNANSPV---APPSASSQLNSSNPSSPFRPLSA 240

Query: 310 LRD 318
             D
Sbjct: 241 STD 243


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +1

Query: 172 PLPSEALSKTS-ALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFL 348
           P PS  +  TS A+     +    +S+Q+ T    S   + +  +++   H   HH    
Sbjct: 70  PPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQH---HHHHSS 126

Query: 349 KSSSALSHTSPPHPHSLKTTGHNY 420
            SS A+S TSP  P S    G N+
Sbjct: 127 SSSYAVSPTSPTSPTSSGPIGSNF 150


>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
 Frame = +1

Query: 169 SPLPSEALSK---TSALKNL-LYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHH 336
           S L S  LS    TSA  +L L   K + ST + T+  S+   S ++T+SSL        
Sbjct: 509 SSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVS-LQTSSSL----IISS 563

Query: 337 PQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLL 435
           P    S +A S ++P   HS+  +  +Y+ +L+
Sbjct: 564 PIISSSLTATSTSTPALTHSITPSNTSYTSSLI 596


>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
           factor |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 633

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +1

Query: 292 MRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKKRVNSVILVEF 471
           M +ASS+R+      P+F  SS ++++       +  + GH+ +   +  R+N+  L   
Sbjct: 1   MDSASSMRNRSPLGVPEFSYSSQSVNNIRGIKSRNRSSIGHSITDPQVASRINAFYLSNV 60

Query: 472 EMPIYFLT 495
           +  I F T
Sbjct: 61  QSSIPFET 68


>SPAC22A12.09c |sap114||splicing factor Sap114|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 481

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 285 IANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPP 392
           I +++   P G  LP PP I E+I ++ +Y+A   P
Sbjct: 23  ITDQSSSVPAGVILP-PPAIREIIDKSASYVARNGP 57


>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
           Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 497

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 403 TTGHNYSVNLLKKRVNSVILVEFEMPIYFL 492
           TT H + V+ ++K  N+V  V+F   +Y L
Sbjct: 265 TTAHEHLVSAIRKAPNTVYAVQFLEAVYKL 294


>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 561

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
 Frame = +1

Query: 142 NTLMRLEMVSPLPSEALSKTSA---LKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSL 312
           N L + E+ SP  S   SK+S       +   L+ NS +    V  +   +    +A + 
Sbjct: 289 NVLAKDEVGSPTWSPTPSKSSTNLRQDGVPPILRFNSLSINTNVARNYLSSEKGYSAHTQ 348

Query: 313 RDHIYPHHPQFLKSSSALSHTSPP 384
                  HP+   ++SA S TSPP
Sbjct: 349 NSSAQSPHPRVFSANSAFSTTSPP 372


>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
           Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 872

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +3

Query: 306 QPQGSHLPTPPPIPEVIQRA--LAYLATAPPQP 398
           Q QGS  P PPP+P  I     +  + T  P P
Sbjct: 350 QVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382


>SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 143

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 321 HLPTPPPIPEVIQRALAYLATAPPQ 395
           HLP PP + +V  +  + L   PPQ
Sbjct: 99  HLPVPPDLAKVSLKETSSLEELPPQ 123


>SPBC354.05c |sre2||membrane-tethered transcription factor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 793

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 268 LSSCPTSPMRTASSLRDHIYPHHP-QFLKSSSALSHTSPPHP 390
           + S  T P    + + +     +P ++ KS +A+SHTS  HP
Sbjct: 594 IDSMQTIPHANFNEMHNAYSSRYPLKYSKSCNAVSHTSMMHP 635


>SPAC25B8.13c |isp7||2-OG-Fe|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 397

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 268 VPPSSLGYWN*PSTCKAGSSAPMF 197
           +PPSS+GY   PS+   G  + MF
Sbjct: 137 LPPSSIGYVLPPSSLANGEGSSMF 160


>SPCC132.01c ||SPCC1322.17c|DUF814 family
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1021

 Score = 25.4 bits (53), Expect = 6.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 36  ILFGLVTVAVAAPQSPTEPIPILKQESSIEP 128
           IL   ++ A A+P S  EP+P  +  SS +P
Sbjct: 184 ILLDEISTAYASPTSINEPLPDQQLSSSTKP 214


>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 230

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 10/30 (33%), Positives = 22/30 (73%)
 Frame = +1

Query: 457 ILVEFEMPIYFLTYLSNFRYSFLYFCTELF 546
           +L+ F   ++FL++  +F +SFL+F +++F
Sbjct: 116 LLLFFFFLLFFLSF--SFSFSFLFFLSQIF 143


>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
           Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 296

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 51  VTVAVAAPQSPTEPIPILKQESSIE 125
           VT   A P   + P+P+ K++SS+E
Sbjct: 49  VTAPAAQPVESSVPLPLPKRKSSVE 73


>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 727

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +1

Query: 295 RTASSLRDHIYPHHPQFLKS---SSALSHTSPPHPHSLKTTGHNYSVNLLKKRVNS 453
           +++ SL  H +P  P+ +++   S   S TSP  P SLK    N   N    ++ S
Sbjct: 131 KSSESLDSHTHP--PKRVRNEDDSLTFSKTSPVSPSSLKDGASNTVTNDASNKIKS 184


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,440,229
Number of Sequences: 5004
Number of extensions: 51708
Number of successful extensions: 184
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 254167452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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