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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0023
         (698 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    48   2e-06
SPAC227.11c |||sensor for misfolded ER glycoproteins Yos9 |Schiz...    29   0.85 
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb...    28   1.1  
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi...    28   1.5  
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo...    28   1.5  
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce...    27   2.0  
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch...    26   4.5  
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac...    26   4.5  
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb...    26   4.5  
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom...    26   4.5  
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch...    26   4.5  
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ...    26   6.0  
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe...    26   6.0  
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    25   7.9  

>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
 Frame = +2

Query: 47  FFICGTDEKQFNKTLLPVFLSHLGTGTSMKTILHFAQEIDAAGRFQQFDYGPTNNMIIY- 223
           FF+  T  K  ++T   V  SHL + TS+K  +H+AQ I      Q +D  P      Y 
Sbjct: 300 FFLSWTG-KNISETQKIVAYSHLYSFTSVKCFVHWAQ-ITRRKVLQMYDDSPGFKPSYYT 357

Query: 224 NSETPPEYDLRKITLPIYLLYSRNDLLSSEQDVDKLYQDLETRTEIYLVPDPEFNHVDYL 403
           N      Y +  I LPI L+Y  ND   +  D++ L   L   ++   +P+  + H+D +
Sbjct: 358 NLNRIARYPIENIRLPITLVYGSND---NMVDIETLKTQLPPLSQCIQIPN--YEHLDII 412

Query: 404 MANDAPRLLNDKVLQFL 454
           M +    ++  +V++ L
Sbjct: 413 MGDTKKDIVIQQVVEQL 429


>SPAC227.11c |||sensor for misfolded ER glycoproteins Yos9
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 322

 Score = 28.7 bits (61), Expect = 0.85
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 170 AGRFQQFDYGPTNNMIIYNSETPPEYDLRKITL 268
           AG+ + F   P  ++I  NS T P YDL+++ +
Sbjct: 81  AGKHEYFCVYPNASLIKQNSTTEPSYDLQELRI 113


>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 779

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 320 VDKLYQDLETRTEIYLVPDPEFNHVDYLMA---NDAPRLLNDKVLQFLLAAFADHQGPD 487
           + +++ ++    ++ L  DP FN +D  MA   ND+  L +  ++Q  L A  D   P+
Sbjct: 397 IKRIFNEISPLNKLDLNSDPRFNELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPE 455


>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
           Urb1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1568

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
 Frame = +2

Query: 89  LLPVFLSHLGTGTSMKTILHFAQEIDAAGRFQQFDYGPTNNMIIYNSETP----PEYDLR 256
           L  +F + + TG     + H  + ++       +   P N ++ +         P+Y  +
Sbjct: 637 LSDLFSNLVCTGEDANCLFHLLENVNVTAFDSDYTLKPFNQLMSFIESLAVQKLPDYVNQ 696

Query: 257 KITLPIYLLYSRNDLLSS 310
             +L  YLLYS ND LS+
Sbjct: 697 IGSLSQYLLYSTNDELSN 714


>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 338

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 224 NSETPPEYDLRKITLPIYLLYSRNDLLSSEQDVDKLYQDLETRTEIYLVPD 376
           N +   E+ ++K+   + LL S N  L     + K Y + E  T+IYLV D
Sbjct: 62  NKKKHDEHKIKKLRNEVLLLQSLNHPL-----LCKFYSEFEDETKIYLVTD 107


>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 512

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +2

Query: 359 IYLVPDPEFNHVDYLMANDAPRLLNDKVLQFLLAAFADHQGPDRHMGTRESVRQYKASRK 538
           ++L+P P+  HV +++  + P         FL+  F   +  +  +   E+V + K + K
Sbjct: 257 LFLLPKPDEQHVVFVIGLEPPLRQGQTRYPFLVTQFVRDEDMEVDLNIEETVLKEKYADK 316

Query: 539 V 541
           V
Sbjct: 317 V 317


>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 485

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 CTQGMIYCLANKMLINCTKIWK 347
           CT G IY + N +LI  +++WK
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWK 302


>SPAC18G6.05c |||translation elongation regulator Gcn1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2670

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 260  FCADRILVEFLNCILSYYWWV 198
            F A+ +LV F NC L YY +V
Sbjct: 2153 FAAEHMLVFFQNCKLDYYRYV 2173


>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 510

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 263 TLPIYLLYSRNDLLSSEQDVDKLYQDLE 346
           T+PI L Y  ND L +    +KL + LE
Sbjct: 356 TVPILLFYGENDFLCNYLSGEKLTRSLE 383


>SPBPB2B2.16c |||MFS family membrane transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 485

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 CTQGMIYCLANKMLINCTKIWK 347
           CT G IY + N +LI  +++WK
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWK 302


>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 485

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 282 CTQGMIYCLANKMLINCTKIWK 347
           CT G IY + N +LI  +++WK
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWK 302


>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 582

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 486 SGPWWSAKAASKNCNTLSFKSLGASFAIR*STWLNSGSG 370
           SGP  +A +   NC+  S KS G S+       +NS +G
Sbjct: 304 SGPLSTASSIPSNCSCPSVKSSGPSYHAEQEVNVNSYNG 342


>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 652

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 9/44 (20%), Positives = 23/44 (52%)
 Frame = +2

Query: 164 DAAGRFQQFDYGPTNNMIIYNSETPPEYDLRKITLPIYLLYSRN 295
           + A  F++FD+     +++Y   T P++ +  + +P+  +   N
Sbjct: 566 ERAHHFRRFDFRGVKAVVMYGPPTNPQFYVELVRMPMRTISEGN 609


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 211 YDNIQFRNSTRIRSAQNHSSHLPAV 285
           + N  FR  TR+ S  ++SS LP++
Sbjct: 98  FKNFPFRPPTRLTSTPSNSSSLPSI 122


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,954,085
Number of Sequences: 5004
Number of extensions: 62694
Number of successful extensions: 203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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