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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_C01_e3_05.seq
         (1568 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta...    30   1.0  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    30   1.0  
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon...    30   1.0  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    29   1.3  
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    29   2.3  
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac...    29   2.3  
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa...    28   3.1  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    28   4.0  
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |...    28   4.0  
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce...    28   4.0  
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb...    28   4.0  
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual     28   4.0  
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    28   4.0  
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi...    27   5.3  
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|...    27   7.1  
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc...    27   7.1  
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo...    27   7.1  
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub...    27   9.3  
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po...    27   9.3  
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy...    27   9.3  
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ...    27   9.3  

>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 450

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 430 EETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRK-PTPDVPSKSKDTPA* 606
           +E KP  +  VK+ EK P+      K      E K ++  KD+K   P  P K+  TP  
Sbjct: 221 KEGKPSQEASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKDKKEKAPKEPPKAA-TPVP 279

Query: 607 SERSSH*GF 633
           S      GF
Sbjct: 280 SMIDFRIGF 288


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 478 TPEPKSAEPKPTDVPAESKPEEKPKDRKPT-PDVPSKSKDT 597
           TP   SA P P  +P+   PE  P    P  P +P  S  T
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGT 263


>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
           of oxoglutarate dehydrogenase complex
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 452

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 427 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPT-PDVPSKSKD 594
           P  TKP PD K        EP+ + PKP    +E   + KPK  +   P   S+++D
Sbjct: 173 PSSTKPAPDAK--------EPEFSSPKPKPAKSEPVKQSKPKATETARPSSFSRNED 221



 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 433 ETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDT 597
           +T   P +   A  K  E K+A+       +  +   KP + KP PD+ ++ K++
Sbjct: 117 DTSAAPPEGGSAGPKKDEVKTADADAAKDLSTPQDSSKPIEEKPMPDLGAEQKES 171



 Score = 27.9 bits (59), Expect = 4.0
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +1

Query: 427 PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTPA 603
           P E KP PD  + A++K   P S +P P       +PE      KP    P K     A
Sbjct: 155 PIEEKPMPD--LGAEQKESAPSSTKPAPD----AKEPEFSSPKPKPAKSEPVKQSKPKA 207



 Score = 27.1 bits (57), Expect = 7.1
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +1

Query: 448 PDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTP 600
           P D  K  E+ P P     +    P+ +KP    K+ + +   P  +K  P
Sbjct: 149 PQDSSKPIEEKPMPDLGAEQKESAPSSTKPAPDAKEPEFSSPKPKPAKSEP 199


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 19/58 (32%), Positives = 23/58 (39%)
 Frame = +1

Query: 427  PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTP 600
            P    P P   V A    P+P  A P P   P+ + P  KP    P   VPS +   P
Sbjct: 1088 PSGIPPVPKPSVAAPP-VPKPSVAVP-PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143



 Score = 27.9 bits (59), Expect = 4.0
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +1

Query: 430 EETKPKPDDKVKA-DEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTP 600
           EE K   +D     D  +   +  E          K EE+P   +P+ + P++ +DTP
Sbjct: 468 EEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTP 525



 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 427  PEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPT--PDVPSKSKDTP 600
            P+ +   P   + + +  P P  +   P  +P  + P  K     P+  P VP+ S + P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074

Query: 601  A 603
            +
Sbjct: 1075 S 1075



 Score = 27.1 bits (57), Expect = 7.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 481  PEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTP 600
            P+P  A P P  VP+ + P  KP    P    PS +   P
Sbjct: 1124 PKPSVAAP-PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162



 Score = 26.6 bits (56), Expect = 9.3
 Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
 Frame = +1

Query: 427  PEETKPKPDDKVKADEKTPEPKSAEPKPTD------VPAESKPEEKPKDRKPTPDVPSKS 588
            P    P P   V A    P P  A P P        VPA S     PK     P VP+ S
Sbjct: 1117 PSGAPPVPKPSVAAPP-VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175

Query: 589  KDTP 600
               P
Sbjct: 1176 SGIP 1179


>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 615

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 430 EETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDV-PSK 585
           EET+  P  ++    K   P  AEP      + +KP E  ++  P   V P+K
Sbjct: 426 EETEESPSTELPETGKEQPPNKAEPAVPTEASSTKPSEAAEESTPRFSVRPNK 478


>SPAC23C4.02 |crn1||actin binding protein, coronin
           Crn1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 601

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +1

Query: 469 DEKTPEPKSAEPKPTDVPAESKPEEKPKDR---KPTPDVPSKSKDTPA*SERSSH 624
           +EK   PK  E +P   P ES  E+KP      KPT    SK ++     +  +H
Sbjct: 422 EEKVETPKP-EAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNH 475


>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
           Swi6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 328

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 445 KPDDKVKADEKTPEPKSAEPKPT-DVPAESKPEEKPKDRKPTPDVP 579
           +P+  +++D ++  P   E   + D+     P      +KP+P+VP
Sbjct: 205 QPNGHIESDNESKSPSQKESNESEDIQIAETPSNVTPKKKPSPEVP 250


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
 Frame = +1

Query: 424  HPEETKP-KPDD----KVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPS 582
            HP  T P +P      ++ A    P P S  P P+  P  + P   P    P    PS
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742


>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 791

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +2

Query: 338 KRNPIRLQXXXXXXXXXXXKKHQQKLRPNTLKRQNQNQMIKSKQMKRHLNLNLQ-NQSLP 514
           K+ P++ +           KK Q+ L+P+T   +NQ   +K+K+ K   N+NLQ +   P
Sbjct: 480 KKTPVQRRKDGKFAKSTKRKK-QKSLKPDT---ENQESSVKNKKAK--SNVNLQYSPKTP 533

Query: 515 TFLLNLNQKRSPRIGS 562
              +N    + P I +
Sbjct: 534 ICKINDETLKPPTIAN 549


>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 428

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 484 EPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSK 591
           +P S    PTD+ A+SK  EKP+ R  +    S +K
Sbjct: 119 KPTSVSLSPTDLQAQSKLIEKPRRRSASNATGSLNK 154


>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1778

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 515 SVGFGSADLGSGVFSSALTLSSGFGFVSSG 426
           S GFGS   G G+F S+ T ++   F +SG
Sbjct: 137 STGFGSQGTGGGLFGSSTTPATTNAFGTSG 166


>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 319

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +1

Query: 448 PDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKSKDTPA 603
           P   VKA   T       PKP  VP  + P  +    + T +V + ++ + A
Sbjct: 209 PSTAVKAPTATVAENEPYPKPQSVPTTTSPNNENNALRSTANVINNTRQSTA 260


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1461

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 1390 PXXXPPRXXGAGXXPPPPP 1334
            P   PP   GAG  PPPPP
Sbjct: 763  PPPPPPGVAGAGPPPPPPP 781



 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 1378 PPRXXGAGXXPPPPPTXXXGAXSXPXXP 1295
            PP     G  PPPPP    GA   P  P
Sbjct: 753  PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780


>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
           Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 965

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 436 TKPKPDDKVKADEKTPEPKSAEPKPTD 516
           +K   DD++K D+KT E K A P   D
Sbjct: 835 SKGSNDDEMKIDKKTTEEKEATPMEMD 861


>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 705 SYRSIGFXWRFXTSMGLSGEADFSEXSVGTSFTLGRRVFR-FRW 577
           S+ S+ F W F   +G+      S   V  + T+   +FR F W
Sbjct: 343 SFESLSFAWGFGCMLGVYIAGGISGGHVNPAVTISLAIFRKFPW 386


>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1190

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 433  ETKPKPDDKVKADEKTPEPKSAEPKPTDVPAES 531
            E  PKPD+ +   +K   P      P  VP+E+
Sbjct: 1030 EESPKPDEYIDQKDKVQSPLLNGKSPVGVPSEA 1062


>SPAC637.12c |mst1||histone acetyltransferase
           Mst1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 463

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
 Frame = +1

Query: 424 HPEETKPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEK-PKDRKPTPDVPSKSKD 594
           +P   KPK   K     K+ +   A  +   + A SK E   P   KP P  PS   D
Sbjct: 80  YPPPEKPK---KAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTPSGESD 134


>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
           subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 214

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 466 ADEKTPEPKSAEPKPTDVPAE-SKPEEKPKDRKPTPDVPSKSK 591
           ADEK  + ++ +P P +V  E  +PEEK       P+ P K +
Sbjct: 85  ADEKEEKKETIQP-PEEVKTEPPQPEEKEGKEAKEPEEPPKEE 126


>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 665

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +2

Query: 395 KKHQQKLRPNT--LKRQNQNQMIKSKQMKRHLNLNLQNQSLPTFLLNLNQKRSPRI 556
           ++H+    P+    K    N  +  K+ +RH      ++  PT + NLN  R+P+I
Sbjct: 456 RQHKTHAAPSKELTKESLSNDQLSVKEKRRH------HKKAPTLIQNLNSPRTPKI 505


>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 278

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 439 KPKPDDKVKADEKTPEPKSAEPKPTDVPAESKPEEKPKDRKPTPDVPSKS 588
           KP  ++  KA + + E K +   P +  A    E+K  DRK +   P K+
Sbjct: 187 KPASNNS-KAGKSSQESKKSSKAPAESAAAVIKEDKVSDRKKSKKKPKKT 235


>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 791

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +1

Query: 427 PEETK-PKPDDKVKADEKTPEPKSAEPKPTD--VPAESKPEEKPKDRKPTPDVPSKSKDT 597
           P ++K P+ ++  K      E  S + +  D    + SK EEKP      P V ++ K+T
Sbjct: 358 PADSKEPRKEEAEKPVTSATEVSSEKVEKVDGNTSSPSKEEEKPSTEPEKPSVVTQRKET 417


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,753,765
Number of Sequences: 5004
Number of extensions: 55189
Number of successful extensions: 281
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 884049604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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