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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40021
         (381 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...   122   1e-28
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...   122   1e-28
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...   122   1e-28
06_01_0080 + 644021-645463                                             33   0.10 
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542...    29   0.94 
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065...    29   1.2  
03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379...    29   1.6  
05_03_0142 - 8866316-8866608,8867652-8867886,8868801-8869076,886...    28   2.9  
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619...    27   3.8  
11_01_0355 + 2679561-2680985,2681183-2682295                           27   3.8  
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734...    27   3.8  
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579...    27   3.8  
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913...    27   3.8  
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610...    27   3.8  
01_06_1106 + 34563368-34563679                                         27   5.0  
08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589           27   6.6  
02_04_0165 - 20489756-20489854,20489930-20490160                       27   6.6  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score =  122 bits (294), Expect = 1e-28
 Identities = 54/86 (62%), Positives = 69/86 (80%)
 Frame = -3

Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
           P+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 79  LNISPFSYGLVVKQVYDSGTIFAPEI 2
           L I PFSYGLV+  VYDSG++F+PE+
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEV 206



 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = -1

Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFPP 235
           +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP     PP
Sbjct: 80  ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score =  122 bits (294), Expect = 1e-28
 Identities = 54/86 (62%), Positives = 69/86 (80%)
 Frame = -3

Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
           P+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 79  LNISPFSYGLVVKQVYDSGTIFAPEI 2
           L I PFSYGLV+  VYDSG++F+PE+
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEV 206



 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = -1

Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFPP 235
           +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP     PP
Sbjct: 80  ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score =  122 bits (294), Expect = 1e-28
 Identities = 54/86 (62%), Positives = 69/86 (80%)
 Frame = -3

Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
           P+ VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180

Query: 79  LNISPFSYGLVVKQVYDSGTIFAPEI 2
           L I PFSYGLV+  VYDSG++F+PE+
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEV 206



 Score = 56.8 bits (131), Expect = 5e-09
 Identities = 25/49 (51%), Positives = 35/49 (71%)
 Frame = -1

Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFPP 235
           +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP     PP
Sbjct: 80  ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128


>06_01_0080 + 644021-645463
          Length = 480

 Score = 32.7 bits (71), Expect = 0.10
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 140 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 247
           I+D  N    N  R  K++EERGLL+   GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135


>01_01_0703 -
           5425713-5425862,5426302-5426451,5426853-5426964,
           5427120-5427481,5427578-5427712,5427812-5427889,
           5427989-5428174,5428266-5428452,5428552-5428658,
           5428732-5428806,5428885-5429040,5429165-5429437,
           5429548-5429643,5429724-5429814,5429883-5430385
          Length = 886

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 154 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
           E++    +++P D VG S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395


>03_03_0258 -
           15905847-15905990,15906088-15906244,15906374-15906504,
           15906991-15907126,15907193-15907464,15907874-15908169,
           15908279-15908646,15908922-15908987,15909064-15909129,
           15909226-15909297,15909391-15909459,15909549-15909620,
           15909708-15909776,15909874-15909945,15910046-15910178,
           15911223-15911361
          Length = 753

 Score = 29.1 bits (62), Expect = 1.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 24  PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
           PE    LT RP  +G+ FN LR ++  +PT   G +   S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397


>03_05_0804 +
           27835508-27835805,27836372-27836421,27837306-27837998,
           27838077-27838388,27838528-27838698
          Length = 507

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 132 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDM 257
           +CT L I+      L+G+ +A+   V SGP P    G T D+
Sbjct: 330 ICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGKTGDL 371


>05_03_0142 -
           8866316-8866608,8867652-8867886,8868801-8869076,
           8869166-8869292,8869869-8870116,8870189-8871104,
           8871980-8872086,8872562-8872930
          Length = 856

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 225 PVLWAGMTTDMGQWHQDELELGLCSPTVCHGPQRGL 332
           P+L    T+ +  W  +  E   CS  V HGP R L
Sbjct: 193 PILILCPTSVIRNWENEFAEWARCSVAVYHGPNRDL 228


>11_08_0037 +
           27859867-27860382,27860471-27861440,27861647-27861991,
           27862074-27862693
          Length = 816

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 280
           KLLP     VGFV  RG  V+  +K+++     P
Sbjct: 464 KLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGP 497


>11_01_0355 + 2679561-2680985,2681183-2682295
          Length = 845

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -2

Query: 371 HTSRATLASCSPAETSLRSVTNCWRTKSKL 282
           HTS  TL+  SP+ +S+   T+C+   + +
Sbjct: 491 HTSELTLSFSSPSPSSISGYTSCYNNNNMM 520


>06_03_1442 -
           30172595-30172606,30172607-30172684,30173034-30173435,
           30173503-30173577,30173667-30173822,30173952-30174143,
           30174202-30174208,30175866-30175918
          Length = 324

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -3

Query: 154 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
           E++    +++P D  G S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158


>06_03_1439 -
           30157110-30157121,30157122-30157199,30157549-30157950,
           30158018-30158092,30158182-30158337,30158467-30158658,
           30158717-30158723,30160381-30160433
          Length = 324

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -3

Query: 154 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
           E++    +++P D  G S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 109 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 158


>06_03_1427 -
           30090464-30090475,30090476-30090553,30090903-30091304,
           30091372-30091446,30091536-30091691,30091821-30092012,
           30093735-30093908,30094966-30095123,30096738-30096914,
           30096996-30097035
          Length = 487

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -3

Query: 154 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
           E++    +++P D  G S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321


>06_03_1422 +
           30058936-30058975,30059057-30059233,30060848-30061005,
           30062063-30062236,30063959-30064150,30064280-30064435,
           30064525-30064599,30064667-30065068,30065418-30065495,
           30065840-30066173,30066275-30066339
          Length = 616

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 13/51 (25%), Positives = 30/51 (58%)
 Frame = -3

Query: 154 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
           E++    +++P D  G S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 272 EMLPSGFLIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKI 321


>01_06_1106 + 34563368-34563679
          Length = 103

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 312 DKLLENKVQAPARPGAIAPCQSSFPP 235
           D+L     QAP RPG + P  S+ PP
Sbjct: 22  DRLGAASSQAPPRPGRVPPSASAPPP 47


>08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589
          Length = 310

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 190 EPGRKRSSLDRGRCCGRE*RLTW 258
           EPG    SLDR RCCGR  +  W
Sbjct: 282 EPG----SLDRSRCCGRGGQSGW 300


>02_04_0165 - 20489756-20489854,20489930-20490160
          Length = 109

 Score = 26.6 bits (56), Expect = 6.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 192 AWKKEVFSGPRPVLWAGMTTDMGQWHQDELELG 290
           AWK+E    P  V WA ++ +  Q H++   +G
Sbjct: 32  AWKREPSPCPDDVHWALLSPEQRQLHEEMAAMG 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,439,187
Number of Sequences: 37544
Number of extensions: 234769
Number of successful extensions: 682
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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