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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30027
         (708 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624...   141   6e-34
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408...   139   2e-33
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407...   138   4e-33
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287...    31   1.2  
02_02_0317 + 8893593-8894207                                           31   1.2  
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931     29   3.6  
05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517           29   4.8  
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997...    28   6.3  
07_03_0604 + 19903654-19904598                                         28   6.3  
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383...    28   6.3  
08_02_0567 + 18769742-18769790,18769928-18771351                       28   8.4  

>11_01_0740 +
           6243517-6243526,6244822-6245323,6245415-6245496,
           6245741-6245821
          Length = 224

 Score =  141 bits (341), Expect = 6e-34
 Identities = 65/92 (70%), Positives = 75/92 (81%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
           K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 78  KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 137

Query: 431 VRSSDRWKAQVIEALRRAKFKFPGRQRSTYQR 526
           VR  +       EALRRAKFKFPGRQ+  + R
Sbjct: 138 VRCKESNAKHAEEALRRAKFKFPGRQKIIHSR 169



 Score =  115 bits (276), Expect = 4e-26
 Identities = 50/68 (73%), Positives = 57/68 (83%)
 Frame = +3

Query: 57  KNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICC 236
           KNKPYPKSR+CRGVPDPKIRI+D+G K+  VD+FP CVHLVS E E +SSEALEA RI C
Sbjct: 13  KNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIAC 72

Query: 237 NKYLVKTA 260
           NKY+ K A
Sbjct: 73  NKYMTKNA 80



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +1

Query: 496 PRTSKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPL 636
           P   KI  S+KWGFTK+ R+E+ KL+ EGR+ +DG   Q    HG L
Sbjct: 160 PGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRL 206


>05_01_0490 +
           4083768-4083775,4083845-4084336,4084441-4084522,
           4086671-4087357,4087555-4087813,4088435-4088558,
           4089474-4089564
          Length = 580

 Score =  139 bits (336), Expect = 2e-33
 Identities = 64/87 (73%), Positives = 71/87 (81%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
           K  GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 74  KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 133

Query: 431 VRSSDRWKAQVIEALRRAKFKFPGRQR 511
           VR          EALRRAKFKFPGRQ+
Sbjct: 134 VRCKPNNAVHASEALRRAKFKFPGRQK 160



 Score =  110 bits (264), Expect = 1e-24
 Identities = 48/68 (70%), Positives = 57/68 (83%)
 Frame = +3

Query: 57  KNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICC 236
           KNKPYPKSR+CRGVPDPKIRI+D+G K+  VD+F  CVHLVS E E ++SEALEA RI C
Sbjct: 9   KNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIAC 68

Query: 237 NKYLVKTA 260
           NKY+ K+A
Sbjct: 69  NKYMTKSA 76



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +1

Query: 496 PRTSKIYVSKKWGFTKYERDEFEKLREEGRLANDG 600
           P   KI  S+KWGFTK+ RDE+ +L+ EGR+  DG
Sbjct: 156 PGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190


>03_02_0897 -
           12239375-12239458,12240035-12240116,12240213-12240714,
           12241150-12241303,12241458-12241629,12242237-12242443,
           12242926-12243323
          Length = 532

 Score =  138 bits (334), Expect = 4e-33
 Identities = 65/87 (74%), Positives = 71/87 (81%)
 Frame = +2

Query: 251 KDCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 430
           K  GKD FH+R+  HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++S
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLS 444

Query: 431 VRSSDRWKAQVIEALRRAKFKFPGRQR 511
           VR  D   A   EALRRAKFKFPGRQR
Sbjct: 445 VRCRDANAAHAQEALRRAKFKFPGRQR 471



 Score =  118 bits (285), Expect = 3e-27
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = +3

Query: 57  KNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGRICC 236
           KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI C
Sbjct: 320 KNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIAC 379

Query: 237 NKYLVKTA 260
           NKY+ K A
Sbjct: 380 NKYMAKHA 387



 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 19/45 (42%), Positives = 28/45 (62%)
 Frame = +1

Query: 496 PRTSKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHG 630
           P   ++  S KWGFT+++RDE+ KL+ EGR+  DG   +    HG
Sbjct: 467 PGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAKLLTRHG 511


>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
            2879715-2879973,2880060-2880346,2880423-2880758,
            2880862-2881003,2881077-2881297,2881379-2881540,
            2881617-2881775,2881860-2882159,2882834-2883097,
            2883133-2883243,2883902-2883988
          Length = 1871

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 423  MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 331
            + CP+ + + VP  LP++P  P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655


>02_02_0317 + 8893593-8894207
          Length = 204

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 667 GSQPEPSSKRREVHVP---GGTARCSRHWRGGP 578
           G +P P++  R +HVP   GG  R  RHWR  P
Sbjct: 3   GRRPRPAAGTR-IHVPQPCGGEIRWERHWRPDP 34


>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
          Length = 478

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 420 PSCPCALVTGGRHRSSRLCAVPSSSSPDVKDLRIKEV 530
           P  P  L   GRH  +R+    +S S +  DLR++E+
Sbjct: 210 PESPRWLAMRGRHADARVVLARTSDSAEEADLRLEEI 246


>05_01_0508 + 4242705-4242886,4243129-4243234,4246179-4246517
          Length = 208

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 316 DADNVERVKSHADMELILSAVFTRYLLQQIR-----PASKASELSCSYSSDTKCTHSGKS 152
           + DN+  V   AD  L+++A     +++Q +     PA+ A+   C+  S TK  H G+ 
Sbjct: 143 NCDNLPVVPLGADQPLVMAACKRAAVIKQQQQASSSPATAAAAAQCAVPSSTKAIHVGEE 202

Query: 151 S 149
           +
Sbjct: 203 A 203


>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
            22300591-22300660,22301632-22301726,22301917-22302048,
            22302154-22302222,22302953-22303051,22303169-22303253,
            22303353-22303453,22303660-22303728,22303861-22303901,
            22304085-22304303,22304444-22304470,22304562-22304660,
            22304898-22305106,22305382-22305485,22305753-22305894,
            22305991-22306289,22306508-22306903
          Length = 1229

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 377  GKPQGTVARVRIGQPIMSVRSSD 445
            G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111


>07_03_0604 + 19903654-19904598
          Length = 314

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 622 PGGTARCSRHWRGGPLHAASQTHH 551
           PGG  R  R   G P+H A + HH
Sbjct: 80  PGGRRRRPRRVEGAPVHRARRLHH 103


>04_01_0289 +
           3830052-3831134,3831141-3831230,3831494-3831525,
           3833690-3834623
          Length = 712

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 144 NVDDFPLCVHLVSDEYEQLSSEALEAGR-ICC 236
           NV++ P  + L+ DE +++  E L AGR I C
Sbjct: 679 NVEEIPTSMDLMKDENDKIQLEILTAGRNIAC 710


>08_02_0567 + 18769742-18769790,18769928-18771351
          Length = 490

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = +2

Query: 362 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQR 511
           MR   G+  G    A +RI + I  + ++++  +AQV+EA RR  F+ PGR R
Sbjct: 24  MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHR 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,588,654
Number of Sequences: 37544
Number of extensions: 502933
Number of successful extensions: 1520
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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