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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10391
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0386 + 33555682-33556344,33557138-33557299                      136   1e-32
07_01_0756 + 5819367-5820038,5820847-5821005                          132   2e-31
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216...    46   3e-05
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871     41   7e-04
01_01_1108 + 8758486-8758815,8758913-8758960,8761512-8761664,876...    29   2.1  
11_04_0439 + 17749634-17749858,17750164-17750301,17750770-177509...    29   2.8  
11_01_0395 + 2999855-2999920,3000605-3002191                           28   6.5  
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334...    28   6.5  
08_02_1290 - 25927667-25928950                                         28   6.5  
01_06_1015 + 33819203-33821827                                         28   6.5  
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640...    27   8.7  
02_02_0419 - 10009686-10012568                                         27   8.7  

>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score =  136 bits (330), Expect = 1e-32
 Identities = 65/84 (77%), Positives = 74/84 (88%)
 Frame = +1

Query: 256 ESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 435
           E IYL SLP+KE +I++  + P L DEV+KI PVQKQTRAGQRTRFKAFV +GDNNGH+G
Sbjct: 63  EEIYLHSLPVKEHQIVETLV-PGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDNNGHVG 121

Query: 436 LGVKCSKEVATAIRGAIILAKLSV 507
           LGVKC+KEVATAIRGAIILAKLSV
Sbjct: 122 LGVKCAKEVATAIRGAIILAKLSV 145



 Score = 74.9 bits (176), Expect = 4e-14
 Identities = 30/32 (93%), Positives = 32/32 (100%)
 Frame = +3

Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
           +PVRRGYWGNKIG+PHTVPCKVTGKCGSVTVR
Sbjct: 146 VPVRRGYWGNKIGQPHTVPCKVTGKCGSVTVR 177



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/24 (58%), Positives = 22/24 (91%)
 Frame = +2

Query: 182 KEDQKEWVPVTKLGRLVREGKIDK 253
           ++++++WVPVTKLGRLV+EG+  K
Sbjct: 38  RQEEEKWVPVTKLGRLVKEGRFSK 61


>07_01_0756 + 5819367-5820038,5820847-5821005
          Length = 276

 Score =  132 bits (320), Expect = 2e-31
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +1

Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
           K  + E IYL SLP+KE +I++  + P L DEV+KI PVQKQTRAGQRTRFKAFV +GD 
Sbjct: 61  KIHKIEEIYLHSLPVKEHQIVEQLV-PGLKDEVMKITPVQKQTRAGQRTRFKAFVVVGDG 119

Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
           +GH+GLGVKC+KEVATAIRGAIILAKLSV
Sbjct: 120 DGHVGLGVKCAKEVATAIRGAIILAKLSV 148



 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +3

Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
           +PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR
Sbjct: 149 VPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 15/24 (62%), Positives = 22/24 (91%)
 Frame = +2

Query: 182 KEDQKEWVPVTKLGRLVREGKIDK 253
           ++++++WVPVTKLGRLV+E KI K
Sbjct: 41  RQEEEKWVPVTKLGRLVKENKIHK 64


>03_04_0238 -
           19219040-19219218,19220296-19220350,19221606-19221690,
           19222068-19222798
          Length = 349

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 483
           ++ V+++  V K  + G++  F+A V +GD  GH+G+GV  +KEV  AI  A
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKA 222


>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
          Length = 233

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = +1

Query: 400 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 495
           FV +GD + HI LGVKC+K  AT + GAIILA
Sbjct: 2   FVVVGDGDSHIELGVKCAK--ATTMSGAIILA 31



 Score = 34.7 bits (76), Expect = 0.057
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +3

Query: 546 KPHTVPCKVTGKCGSVTVR 602
           KPHTV CKV  K GSVTVR
Sbjct: 47  KPHTVSCKVADKYGSVTVR 65


>01_01_1108 +
           8758486-8758815,8758913-8758960,8761512-8761664,
           8761749-8761847,8761884-8761991,8762078-8762200,
           8763030-8763287
          Length = 372

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +1

Query: 331 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNN-GHIGLGVKCSKEVATAIRGAIILAKLSV 507
           +E +  M + K  RA Q+ RF  F  +G NN GH    ++ S EVA A R +IIL    +
Sbjct: 210 EEEISGMGMSKVIRADQK-RF--FFDLGSNNRGHY---LRIS-EVAGADRSSIILPLSGL 262

Query: 508 YQFEEVTG 531
            QF E+ G
Sbjct: 263 KQFHEMVG 270


>11_04_0439 +
           17749634-17749858,17750164-17750301,17750770-17750943,
           17751099-17751184,17751264-17751525,17751616-17751815,
           17753631-17754086,17754198-17754474,17754694-17754828,
           17754946-17755026,17756305-17756400,17756676-17756771,
           17756844-17756900,17756975-17757043,17757158-17757237,
           17758185-17758329,17758422-17758511,17758914-17758994,
           17759103-17759198,17759279-17759335,17759417-17759461,
           17759547-17759612,17760304-17760350,17762771-17762865,
           17763375-17763393,17763438-17763498,17763637-17763660
          Length = 1085

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 462 DFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHD 346
           +F+A LHT  +M   V      +E C LS    F+ +HD
Sbjct: 655 EFIAYLHTYVDMLHKVDEIGDTMEDCYLSSPIKFVSKHD 693


>11_01_0395 + 2999855-2999920,3000605-3002191
          Length = 550

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 268 LFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRT 387
           +F   +++ ++IDF L   L D  + I+P+    R G++T
Sbjct: 237 MFGRRVEKEKVIDFLLCSDLPDTYVSILPIIGPHRIGKKT 276


>09_04_0594 - 18831011-18831360,18831562-18832111,18832364-18833406,
            18833496-18833760,18835194-18835340,18835431-18835511,
            18835626-18835804,18835935-18836093,18836269-18836398,
            18836935-18837094,18837337-18837419,18837865-18837915,
            18838035-18838151,18838273-18838359
          Length = 1133

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +1

Query: 190  PERVGSCHQTRPSCSRRKNRQTESIYLFSLPIKEFEIIDFFLGPS--LNDEVLKIMPVQK 363
            P  +  CHQ      +   R T +I   S  ++E    D   GPS  + + +L   P+  
Sbjct: 826  PVHLHDCHQAAFGDFQGSQRATFNIANLSTMVQESPNFDLQTGPSNQITESILTTEPMNG 885

Query: 364  QTRAGQRT 387
            +T A + T
Sbjct: 886  ETNAVEET 893


>08_02_1290 - 25927667-25928950
          Length = 427

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = -3

Query: 528 SNLFELVNRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSG 373
           S L  LV    SKD  +   SGD L   H+ +     VA   +CL    L+G
Sbjct: 291 SQLGALVVALSSKDGKSFANSGDLLVTPHSHSAAAAGVAITTRCLYPRRLAG 342


>01_06_1015 + 33819203-33821827
          Length = 874

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +3

Query: 237 KEKSTNREHLLV----FFTNQRIRDH*FLPRPVPE**GSKDHACTETNTCRTA 383
           KE  T R+ LLV    +FT + I +H  +P P  +  GSK      T T RTA
Sbjct: 3   KEYLTKRKFLLVLDNAYFTEENILEHMGIPHPRQQNIGSK--VIVTTRTRRTA 53


>11_04_0474 + 18162538-18163731,18163800-18163855,18163951-18164011,
            18164107-18165495,18166024-18166635,18166706-18166852,
            18166941-18167209,18167322-18167412,18167500-18167757,
            18168376-18168450,18168937-18168945
          Length = 1386

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +1

Query: 238  RKNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR--AGQRTRFKAFVAI 411
            R  R  +     SL + E    +FF  P+LND  ++ +   +Q R   G R  F     +
Sbjct: 1259 RDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSILASEQQRILGGCRIVFSRIFPV 1318

Query: 412  GDNNGHI 432
            G+ N H+
Sbjct: 1319 GEANPHM 1325


>02_02_0419 - 10009686-10012568
          Length = 960

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = -3

Query: 483 SASNGSGDFLAALHTQTNMTVVVANGNKCLETCALS-GTCLFLYRHDL*NLIIQGR-AEE 310
           SA N SG     +   + +T++  + NK      L  G+   L R  L N ++ G  +EE
Sbjct: 355 SAVNMSGHLPKWIGEMSELTILDLSFNKLSGEIPLGIGSLSNLTRLFLHNNLLNGSLSEE 414

Query: 309 EINDLEFFDW*RKQVNALGLSIFPS 235
              DL   +W    +N L + I PS
Sbjct: 415 HFADLVSLEWIDLSLNNLSMEIKPS 439


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,076,003
Number of Sequences: 37544
Number of extensions: 324598
Number of successful extensions: 988
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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