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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20089
         (690 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265...    84   9e-17
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806...    48   5e-06
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832...    46   2e-05
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516...    46   4e-05
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118...    44   1e-04
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949     44   2e-04
10_08_0620 - 19321612-19323237                                         42   6e-04
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995...    40   0.002
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880...    34   0.12 
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...    33   0.21 
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238...    31   0.86 
11_06_0713 + 26524984-26525276,26526008-26526434,26526550-265271...    30   2.0  
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648...    29   4.6  
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...    29   4.6  
04_01_0078 - 879016-881288,884676-885141                               28   8.0  

>05_01_0337 -
           2658647-2658722,2658797-2658915,2658995-2659102,
           2659187-2659255,2659561-2659655,2659740-2659944,
           2660125-2660211,2660291-2660405,2660696-2660802,
           2661054-2661146,2661243-2661290,2661345-2661544,
           2661993-2662128,2662228-2662291,2662779-2662912
          Length = 551

 Score = 84.2 bits (199), Expect = 9e-17
 Identities = 38/57 (66%), Positives = 48/57 (84%)
 Frame = +2

Query: 83  AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
           ++ +LNP AE    + AL +NI+AAKG+QDV+KTNLGPKGT+KMLV GAGDIK+TKD
Sbjct: 2   SLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKD 58



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 38/81 (46%), Positives = 49/81 (60%)
 Frame = +1

Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
           N LL EMQIQ+PTA +IAR                VL IGEL+KQ++  I EG HPR + 
Sbjct: 60  NTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLV 119

Query: 436 EGFDIARNKSLEVLESMKISI 498
           +GFD+A+  +LE LE  K S+
Sbjct: 120 DGFDVAKRATLEFLEKFKTSV 140



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +3

Query: 531 RTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
           + SL  +++  LAD LTD  V+AVL IR P +P+DL MVEIM M+HK   +T
Sbjct: 172 KLSLLGQLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDT 223


>03_06_0362 +
           33379489-33379624,33380161-33380423,33380524-33380670,
           33380753-33380914,33381681-33381758,33382329-33382462,
           33382702-33382774,33382852-33382929,33383002-33383124,
           33383223-33383317,33383723-33383932,33384115-33384172,
           33384268-33384333
          Length = 540

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 23/75 (30%), Positives = 40/75 (53%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +++E+++QHP A ++                  +   GELL++A+  I  GLHP  I  G
Sbjct: 67  IVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIG 126

Query: 442 FDIARNKSLEVLESM 486
           +  A NK++E+LE +
Sbjct: 127 YTKAINKTVEILEDL 141


>02_02_0253 -
           8325437-8325628,8325705-8325779,8325933-8326037,
           8326249-8326374,8326451-8326835,8326931-8327208,
           8327294-8327367,8327476-8327547,8327637-8327705,
           8340132-8340201,8340806-8340873,8341571-8341643,
           8341807-8341868,8342168-8342198
          Length = 559

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/98 (25%), Positives = 46/98 (46%)
 Frame = +1

Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
           N +L E+ + HP A  +                  ++L GE+L  A  FI +  HP +I 
Sbjct: 64  NCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVIC 123

Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
             +  A + +L VL+ + I +++  R+  ML ++ S +
Sbjct: 124 RAYTKALDDALSVLDKIAIPVDVDDRV-AMLGLVKSSI 160



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +2

Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAMFCYMR 274
           NI AAK + D+++T LGP+  +KML+  AG I +T D   C +R
Sbjct: 26  NIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGN-CILR 68


>06_03_0477 -
           21250811-21250981,21251261-21251374,21251447-21251613,
           21252051-21252153,21252315-21252367,21252438-21252570,
           21252835-21253183,21253685-21254003,21254519-21254717
          Length = 535

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/45 (46%), Positives = 28/45 (62%)
 Frame = +2

Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
           R   A   NI+A K +  +++T+LGPKG  KML S  GD+ IT D
Sbjct: 25  RGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITND 69



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 20/82 (24%), Positives = 38/82 (46%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +L +M + +  A L+                  V++ G LL+QA+  +  G+HP  I EG
Sbjct: 73  ILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEG 132

Query: 442 FDIARNKSLEVLESMKISIEIA 507
           +++A   + + LE +    E +
Sbjct: 133 YELASRIAFDHLEHISHKFEFS 154


>06_03_0353 +
           19810945-19810975,19811308-19811369,19811741-19811813,
           19813292-19813359,19813496-19813565,19813908-19813976,
           19814065-19814136,19814247-19814320,19814420-19814697,
           19814804-19815188,19815268-19815393,19815583-19815687,
           19815986-19815994,19817040-19817114,19817202-19817390
          Length = 561

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +2

Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
           NI AAK + D+++T LGP+  +KML+  +G I +T D
Sbjct: 26  NIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTND 62



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +1

Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
           N +L E+ I HP A  +                  ++L GE+L  A+ FI +  HP +I 
Sbjct: 64  NAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVIC 123

Query: 436 EGFDIARNKSLEVLESMKISIEI 504
             +  A   +L VL+ + + +++
Sbjct: 124 RAYTKALEDALAVLDKIAMHVDV 146


>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
          Length = 550

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/53 (41%), Positives = 33/53 (62%)
 Frame = +2

Query: 140 VNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAMFCYMRCKSSTLQP 298
           +NI+AA+ + D ++T+LGP+G  KM+ SG  ++ IT D      R   S LQP
Sbjct: 30  LNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSR--MSLLQP 80



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +L  M +  P A ++A                 V+L G LL++A   +S G HP    + 
Sbjct: 71  ILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADA 130

Query: 442 FDIARNKSLEVLESMKISIEIALR 513
                 +++EVL +M I IE++ R
Sbjct: 131 LHRLATRAVEVLHAMAIPIELSDR 154


>10_08_0620 - 19321612-19323237
          Length = 541

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +L  M +  P A ++A                 V+L G LL++A   +S G HP    + 
Sbjct: 75  ILSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADA 134

Query: 442 FDIARNKSLEVLESMKISIEIALR 513
             +   +++EVL  M I +E++ R
Sbjct: 135 LHLLAARAVEVLHGMAIPVELSDR 158



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = +2

Query: 140 VNISAAKGIQDVMKTNLGPKGTMKMLVSGA--GD--IKITKD 253
           +NI+A + +    +T+LGP+G  KM+ S +  GD  + IT D
Sbjct: 30  LNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITND 71


>06_03_1193 -
           28298656-28298754,28299303-28299377,28299456-28299544,
           28299679-28299760,28300385-28300474,28300557-28300655,
           28300733-28300852,28300968-28301084,28301174-28301309,
           28301415-28301584,28301744-28301947,28302032-28302157,
           28302841-28303101,28303215-28303229
          Length = 560

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 20/80 (25%), Positives = 37/80 (46%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           ++  + I HP A ++                  VLL  E LK+A  +I +G+HP  +   
Sbjct: 68  IMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRS 127

Query: 442 FDIARNKSLEVLESMKISIE 501
           +  A + ++E ++ +  SIE
Sbjct: 128 YRTAGHLAIEKVKDLATSIE 147


>03_05_0339 +
           23287620-23287676,23287784-23287849,23287937-23288048,
           23288240-23288368,23288795-23288866,23289245-23289360,
           23289494-23289570,23289788-23290273,23290373-23290688,
           23290769-23290915
          Length = 525

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +L  + I +P A ++                  V+L GELL++A+  ++  +HP  I  G
Sbjct: 63  ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAG 122

Query: 442 F----DIARNKSLEVLESMKISIE 501
           +    + ARN  LE     K +I+
Sbjct: 123 YRMAVECARNALLERTMDNKENID 146


>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 14/66 (21%), Positives = 29/66 (43%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
           +L  ++++HP A ++                  V++  ELLK+ +  +   +HP  I  G
Sbjct: 18  ILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISG 77

Query: 442 FDIARN 459
           + +  N
Sbjct: 78  YRLQYN 83


>03_01_0305 -
           2383187-2383298,2383606-2383684,2383762-2383867,
           2383941-2384044,2384141-2384240,2384533-2384628,
           2384724-2384801,2385355-2385423,2385511-2385591,
           2385670-2385759,2385859-2385945,2386022-2386126,
           2386591-2386686,2386796-2386971,2387225-2387384,
           2387898-2388029,2388236-2388260,2389023-2389174
          Length = 615

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAM 259
           +A A+ +   + + D +K  +GPKG   ++    G  K+TKD +
Sbjct: 80  EARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGV 123


>11_06_0713 +
           26524984-26525276,26526008-26526434,26526550-26527171,
           26528059-26528099,26528181-26528249,26528565-26528665,
           26529300-26529378,26529955-26530053,26530129-26530197,
           26530326-26530375,26530482-26530548,26531031-26531125,
           26534469-26534856
          Length = 799

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 500 SIEIFIDSKTSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSPMR 366
           ++E  +   TS  +  + +KP V + G K  L+N  +C S  P++
Sbjct: 186 TLEEILGHSTSGKVYPSSAKPRVQLNGSKSGLLNKVSCDSQQPLQ 230


>05_07_0067 +
           27463703-27463705,27464309-27464365,27464779-27464844,
           27464985-27465096,27465281-27465409,27466076-27466191,
           27466364-27466440,27466678-27467163,27467255-27467570,
           27467618-27467797
          Length = 513

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +1

Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRII 432
           +L  + I +P A ++                  V+L GELL++A+  ++  +HP  I
Sbjct: 64  ILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 120


>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +2

Query: 62  NVLNEMAAISLLNPKAEFAR--AAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG 226
           N L  +AA+  LNP    AR  AA A A  + A     D  +T L P+ + K+  +G
Sbjct: 321 NPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTEKLDSKRTKLSPEESSKIKAAG 377


>04_01_0078 - 879016-881288,884676-885141
          Length = 912

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 328 LEWLTLEQSVRL*GAGFASHVTKHCILG 245
           L+WL LE SV L G     H+T    LG
Sbjct: 816 LKWLALEHSVELRGEWILEHLTSLAYLG 843


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,931,205
Number of Sequences: 37544
Number of extensions: 313380
Number of successful extensions: 672
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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