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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00009
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0018 + 14164103-14164225,14164596-14164892                       97   1e-20
03_01_0433 + 3353255-3353374,3353532-3353828                           97   1e-20
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151...    86   2e-17
12_02_0605 - 20924385-20924606,20924705-20924899                       71   9e-13
08_02_0735 + 20564451-20564525,20566346-20566561                       67   1e-11
12_02_0151 - 14468480-14468698,14468902-14469090                       67   1e-11
07_03_0790 + 21536389-21536577,21536854-21537072                       67   1e-11
07_03_0791 + 21539069-21539257,21539493-21539711                       66   3e-11
03_05_0949 + 29089293-29089487,29089592-29089810                       65   4e-11
05_05_0119 - 22512228-22512500,22512577-22512795                       62   3e-10
03_02_0562 - 9469263-9469517,9469619-9469843                           61   7e-10
05_01_0107 + 706936-707202,707231-707485                               56   3e-08
02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098     31   1.1  
12_02_1023 + 25393555-25393901,25396224-25396368                       30   2.0  
11_01_0426 + 3271324-3271377,3272114-3272227,3272475-3272588,327...    29   4.6  
02_04_0054 + 19279579-19280772                                         28   6.1  
01_06_1695 + 39251266-39252390,39252852-39252983,39253560-392537...    28   6.1  
01_06_1012 - 33806190-33807875,33807963-33808331                       28   6.1  
07_03_0810 - 21674710-21674960,21675318-21675405,21675739-216759...    28   8.0  
06_03_0197 + 17794418-17794771,17795040-17795549                       28   8.0  
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462...    28   8.0  

>10_08_0018 + 14164103-14164225,14164596-14164892
          Length = 139

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 397
           + G  +KDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 83  LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 135



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           +QFPVGRIHR LK R +++GRVGATAAVY+AAILEYLTAEVLELAGNA K
Sbjct: 40  IQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASK 89


>03_01_0433 + 3353255-3353374,3353532-3353828
          Length = 138

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 45/53 (84%), Positives = 48/53 (90%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 397
           + G  +KDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K
Sbjct: 82  LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 134



 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 44/50 (88%), Positives = 47/50 (94%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRIHR LK+R ++HGRVGATAAVYSAAILEYLTAEVLELAGNA K
Sbjct: 39  LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASK 88


>03_05_1090 +
           30313176-30313292,30314162-30314236,30314938-30315181,
           30315701-30315787,30315832-30315995,30316587-30316689,
           30317751-30317908,30318025-30318105,30318192-30318344
          Length = 393

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 117 FPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           FPVGRIHR LK RT ++GRVGATAAVYSAAILEYLTAEVLELAGNA K
Sbjct: 65  FPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASK 112



 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 364
           + G  +KDLKVKRITPRHLQLAIRGDEELD+LIK TIAGG V
Sbjct: 106 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGVV 147


>12_02_0605 - 20924385-20924606,20924705-20924899
          Length = 138

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGG 406
           + G  A+D K  RI PRH+QLA+R DEEL  L+ A TIA GGV+P+IH++L+ KKGG
Sbjct: 69  LAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG 125



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R+LK    +  RVGA A VY +A+LEYL AEVLELAGNA +
Sbjct: 27  LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 75


>08_02_0735 + 20564451-20564525,20566346-20566561
          Length = 96

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKKGGPGA 415
           + G  A+D K  RI PRH+QLA+R DEEL  L+ A TIA GGV+P+IH  L+ KK G  A
Sbjct: 29  LAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGAVTIANGGVMPNIHNLLLPKKAGSSA 88


>12_02_0151 - 14468480-14468698,14468902-14469090
          Length = 135

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 406
           + G  A+D K  RI PRH+QLA+R DEEL  L+  ATIA GGV+P+IH+ L+ KK G
Sbjct: 67  LAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 37/50 (74%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R LK    +  RVGA A VY AA+LEYL AEVLELAGNA +
Sbjct: 25  LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73


>07_03_0790 + 21536389-21536577,21536854-21537072
          Length = 135

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 406
           + G  A+D K  RI PRH+QLA+R DEEL  L+  ATIA GGV+P+IH+ L+ KK G
Sbjct: 67  LAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAG 123



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 37/50 (74%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R LK    +  RVGA A VY AA+LEYL AEVLELAGNA +
Sbjct: 25  LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73


>07_03_0791 + 21539069-21539257,21539493-21539711
          Length = 135

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGGPGA 415
           + G  A+D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+IH  L+ KK G  A
Sbjct: 67  LAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGSA 126



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 37/50 (74%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R LK    +  RVGA A VY AA+LEYL AEVLELAGNA +
Sbjct: 25  LQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAAR 73


>03_05_0949 + 29089293-29089487,29089592-29089810
          Length = 137

 Score = 65.3 bits (152), Expect = 4e-11
 Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKKGG 406
           + G  A+D K  RI PRH+QLA+R DEEL  L+   TIA GGV+P+I + L+ KKGG
Sbjct: 69  LAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGTVTIAAGGVLPNIQQVLLPKKGG 125



 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R+LK    +  RVGA A VY +A+LEYL AEVLELAGNA +
Sbjct: 27  LQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAAR 75


>05_05_0119 - 22512228-22512500,22512577-22512795
          Length = 163

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 33/50 (66%), Positives = 37/50 (74%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R+LK    S  R+G  A VY AA+LEYL AEVLELAGNA +
Sbjct: 35  LQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAAR 83



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPGA 415
           + G  A+D K  RI PRH+ LAIR DEEL  L+   TIA GGV+P+I+  L+ KK G  A
Sbjct: 77  LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTGSAA 136


>03_02_0562 - 9469263-9469517,9469619-9469843
          Length = 159

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
           LQFPVGRI R+LK    +  R+G  A VY AA+LEYL AEVLELAGNA +
Sbjct: 37  LQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAAR 85



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
           + G  A+D K  RI PRH+ LAIR DEEL  L+   TIA GGV+P+I+  L+ KK
Sbjct: 79  LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133


>05_01_0107 + 706936-707202,707231-707485
          Length = 173

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +2

Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
           + G  A+D K  RI PRH+ LAIR DEEL  L+   TIA GGV+P+I+  L+ KK
Sbjct: 93  LAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 147



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/40 (62%), Positives = 28/40 (70%)
 Frame = +3

Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAE 230
           LQFPVGRI R+LK    +  RVG  A VY AA+LEYL AE
Sbjct: 34  LQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAE 72


>02_05_1354 - 35872352-35872429,35872590-35872667,35872826-35873098
          Length = 142

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 290 HLQLAIRGDEELDSLIKATIAGGG 361
           HL L + G EELD L++  I GGG
Sbjct: 37  HLSLGVGGAEELDLLLQVGIGGGG 60


>12_02_1023 + 25393555-25393901,25396224-25396368
          Length = 163

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -3

Query: 375 MCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSLAHFP 244
           MCG T PPA VA   +  S +    S   +G+        AHFP
Sbjct: 118 MCGWTAPPATVALPGVETSEAAAFESSTKKGISEEPPLLDAHFP 161


>11_01_0426 +
           3271324-3271377,3272114-3272227,3272475-3272588,
           3272677-3272834,3273067-3273157,3273668-3273778
          Length = 213

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +2

Query: 287 RHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKK 400
           + + L  R DEELD L  +    GGV   IH  L+G+K
Sbjct: 141 QQMLLIKRQDEELDELSASVQRIGGVGLTIHDELVGQK 178


>02_04_0054 + 19279579-19280772
          Length = 397

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 185 GSSLFCRYFGISYSRGFGVGGKCAKDLKVKRITP 286
           G    C  F +S+++GFG+  KC   LK  +  P
Sbjct: 221 GGDTTCLPFPVSFTKGFGLRSKCINWLKEWQALP 254


>01_06_1695 +
           39251266-39252390,39252852-39252983,39253560-39253748,
           39253887-39253954,39254080-39254182,39254387-39254509
          Length = 579

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 284 PRHLQLAIRGDEELDSLIKATIAGGGVIP 370
           PRH+   + G E  D L  A+ AGG   P
Sbjct: 174 PRHVSRVVIGSEVFDRLASASAAGGWAAP 202


>01_06_1012 - 33806190-33807875,33807963-33808331
          Length = 684

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -3

Query: 345 VAFMRLSNSSSPLIASCKCRGVIRFTFKSLAHFPPTPKP 229
           +  M +S  +   +  C CR +    FKS+ +F P  +P
Sbjct: 349 IGMMLISYWTYAALQGCNCRTLSHLLFKSIKYFRPESRP 387


>07_03_0810 -
           21674710-21674960,21675318-21675405,21675739-21675990,
           21676521-21676685,21677358-21678494
          Length = 630

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = +2

Query: 188 SSLFCRYFGISYSRGFGVGGKCAKDLKVK-RITPRHLQL 301
           +S FC  FG     GFG GG C    +   R+  R + +
Sbjct: 582 TSFFCLGFGTFRGNGFGFGGYCRAGARAAVRVIDREMSI 620


>06_03_0197 + 17794418-17794771,17795040-17795549
          Length = 287

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 366 MTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKSLAHFPPTPKPL 226
           +TPP A +A ++  N   PL+ +    GV+   F+S+      P  L
Sbjct: 143 ITPPSAFMASIKFRNDKCPLMPAKMPIGVLSLLFQSILSAGGNPHEL 189


>03_05_0833 -
           28045442-28045881,28045961-28046063,28046172-28046203,
           28046299-28046516,28046606-28046721,28047757-28048000,
           28048423-28048510,28048596-28048667,28048758-28048869,
           28049047-28049115,28049627-28049685,28050067-28050325
          Length = 603

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +3

Query: 399 KAVLVHPFNFKYVLLKSVFNSYFEQVPTFILYFTLAGFVKYLNNIMFY*SYHHSVSYLNV 578
           K + +  FN K     SVF  Y+ ++ T+I++      V  L ++ F  +Y  S+S+  +
Sbjct: 106 KLISIFVFNLKQAQPYSVFILYWAKIITYIVFLLAQEDVDLLKSLNFD-AYRFSISWSRI 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,425,878
Number of Sequences: 37544
Number of extensions: 358234
Number of successful extensions: 1056
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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