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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0057.Seq
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0466 - 34134138-34134278,34134355-34134481,34134558-341347...   150   7e-37
01_06_1253 - 35753546-35753686,35753759-35753885,35753970-357541...   150   7e-37
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126...   137   7e-33
05_03_0026 + 7466017-7466034,7466340-7466405,7466572-7466833,746...    42   3e-04
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132...    29   3.6  
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547...    29   3.6  
05_06_0209 - 26389902-26389928,26389981-26390161,26390265-263904...    29   3.6  
11_04_0381 - 16999529-16999778,16999855-17000102                       28   4.7  
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170...    28   6.2  
10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    28   6.2  
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243...    27   8.2  

>03_06_0466 -
           34134138-34134278,34134355-34134481,34134558-34134713,
           34135831-34135835
          Length = 142

 Score =  150 bits (364), Expect = 7e-37
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = -1

Query: 508 REQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 329
           R QRWADK +KK+H+G +WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQL+KN
Sbjct: 18  RNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLVKN 76

Query: 328 GKKVTAFVPRDGCLNHIEENDEVLV 254
           GKK+ AFVP DGCLN IEENDEVL+
Sbjct: 77  GKKIAAFVPNDGCLNFIEENDEVLI 101



 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 132
           AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 102 AGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142


>01_06_1253 -
           35753546-35753686,35753759-35753885,35753970-35754125,
           35754761-35754853,35757132-35757265,35757339-35757465,
           35757550-35757705,35758321-35758325
          Length = 312

 Score =  150 bits (364), Expect = 7e-37
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = -1

Query: 508 REQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 329
           R QRWADK +KK+H+G +WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQL+KN
Sbjct: 18  RNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLVKN 76

Query: 328 GKKVTAFVPRDGCLNHIEENDEVLV 254
           GKK+ AFVP DGCLN IEENDEVL+
Sbjct: 77  GKKIAAFVPNDGCLNFIEENDEVLI 101



 Score =  150 bits (364), Expect = 7e-37
 Identities = 65/85 (76%), Positives = 75/85 (88%)
 Frame = -1

Query: 508 REQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 329
           R QRWADK +KK+H+G +WK  PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQL+KN
Sbjct: 188 RNQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLVKN 246

Query: 328 GKKVTAFVPRDGCLNHIEENDEVLV 254
           GKK+ AFVP DGCLN IEENDEVL+
Sbjct: 247 GKKIAAFVPNDGCLNFIEENDEVLI 271



 Score = 81.0 bits (191), Expect = 6e-16
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -3

Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 132
           AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 272 AGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 312



 Score = 77.4 bits (182), Expect = 8e-15
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -3

Query: 254 AGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 138
           AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+P
Sbjct: 102 AGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 140



 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 573 CRAIQMGKPRGIRTARKHVNHRVNSDGRTKNSRK 472
           C ++ MGK RG+   RK   HR N     K  +K
Sbjct: 166 CPSVNMGKTRGMGAGRKLKTHRRNQRWADKAYKK 199


>10_06_0053 -
           10110617-10111271,10112023-10112417,10112565-10112650,
           10112973-10113021,10114164-10114290,10114372-10114526,
           10114730-10114948
          Length = 561

 Score =  137 bits (331), Expect = 7e-33
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -1

Query: 508 REQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 329
           R QRWADK +KK+H G +WK  PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+KN
Sbjct: 89  RNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKN 147

Query: 328 GKKVTAFVPRDGCLNHIEENDEVLV 254
           GKK+ AFVP DGCLN I+EN+   V
Sbjct: 148 GKKIAAFVPNDGCLNFIKENEVAYV 172


>05_03_0026 +
           7466017-7466034,7466340-7466405,7466572-7466833,
           7467254-7467294
          Length = 128

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 254 AGFGRKGHAVGDIPGVRFKVVK 189
           +GFG KGHAVGDI GVRF+VVK
Sbjct: 72  SGFGHKGHAVGDIRGVRFEVVK 93


>10_08_0374 -
           17312430-17312513,17312794-17313029,17313081-17313261,
           17313335-17313445,17313495-17313722,17313862-17313999,
           17314159-17314375,17314452-17314564,17314919-17314921
          Length = 436

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 REPPREQRWADKEFKKAHMGTKWKANPFGG 431
           R PPR  R  DK         +W+AN FGG
Sbjct: 19  RMPPRPTRDEDKPVLTPKRDRQWQANDFGG 48


>07_01_0716 +
           5472618-5472818,5472943-5472985,5473672-5473761,
           5473863-5473938,5474435-5474504,5474911-5475075,
           5475261-5475404,5475547-5475651,5475876-5476022,
           5476463-5476531,5476882-5476989,5477392-5477483,
           5477559-5477598,5478129-5478221,5478386-5478958,
           5479596-5479610
          Length = 676

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 295 GCLNHIEENDEVLVRDSVVKVTPSVTFP 212
           GCL H +  DE+L+R  V+  +P++  P
Sbjct: 513 GCLTHAQNADEILLRRGVLLSSPTLLPP 540


>05_06_0209 -
           26389902-26389928,26389981-26390161,26390265-26390407,
           26390480-26390588,26390839-26391023,26391428-26392082,
           26392392-26392496,26392757-26392844,26392885-26392947,
           26393451-26393513,26394328-26394484
          Length = 591

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = -2

Query: 519 VNHRVNSDGRTKNSRKPTWVRNGRLTLSV-VHLT 421
           ++H+VNSD     S++P ++R G +++S+ +H T
Sbjct: 356 LSHQVNSDNGVIKSKRPCFLRIGSISVSMSIHQT 389


>11_04_0381 - 16999529-16999778,16999855-17000102
          Length = 165

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 REPPREQRWADKEFKKAHMGTKWKANPFGG 431
           R PPR  R  DK         +W+AN FGG
Sbjct: 63  RMPPRPTRDEDKPVMTPKGDRQWQANDFGG 92


>12_02_0248 +
           16413295-16414394,16416511-16416762,16416839-16417055,
           16417216-16417353,16417493-16417669,16417744-16417851,
           16417925-16418392,16418493-16418570,16418673-16418756
          Length = 873

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 520 REPPREQRWADKEFKKAHMGTKWKANPFGG 431
           R PPR  R  DK         +W+AN FGG
Sbjct: 431 RMPPRPTRDEDKPVLTPKGDRQWQANDFGG 460


>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 26  FFCCTQYLLCTRILHFMNL*TTRFPTAGHLSQCT-PMILVAPFSL 157
           +FCC QY +   I HF     TR  +  ++ + T  M +VA   L
Sbjct: 43  YFCCKQYDIILLIAHFYRALRTRMKSVRNIQKITKAMKMVAASKL 87


>03_01_0309 -
           2432395-2433271,2433494-2434495,2434538-2435073,
           2435579-2435716,2436050-2436148,2436278-2436346,
           2436968-2437063
          Length = 938

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +2

Query: 101 TAGHLSQCTPMILVAPFSLCRERGET----RWLLLPP*NELRECHRRRDLYDRI 250
           T GH+++  P+ L     LCR   E     + ++  P  E  E H+  DL   I
Sbjct: 138 TTGHVAKAAPVFLDETIKLCRVYSEAAKSDQCIMSMPKEETTEEHKETDLTSNI 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,489,752
Number of Sequences: 37544
Number of extensions: 387573
Number of successful extensions: 922
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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