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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0014.Seq
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802...    30   1.8  
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446...    30   1.8  
04_04_0056 + 22406872-22407258,22408405-22409310                       29   3.1  
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879...    29   4.1  
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810...    29   4.1  
11_01_0385 + 2915532-2916482                                           23   5.0  
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508...    28   5.4  
02_05_1113 + 34207997-34208380                                         28   5.4  
02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253     28   5.4  
12_02_0096 - 13573612-13573632,13573846-13573884,13574160-135744...    28   7.1  
10_07_0195 + 13972656-13972970,13973518-13973848,13975312-139754...    28   7.1  
04_04_0899 - 29229812-29229929,29230009-29230179,29230262-292310...    28   7.1  
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220...    27   9.4  
12_01_0442 + 3495333-3496484                                           27   9.4  
08_01_0133 + 1062365-1063057,1063210-1063318,1063914-1064005,106...    27   9.4  
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710...    27   9.4  
01_06_0116 - 26595570-26596607,26596964-26598353,26599386-265999...    27   9.4  

>04_04_1448 +
           33679110-33679140,33679858-33680057,33680163-33680272,
           33680372-33680591,33680672-33680794,33680892-33680960,
           33681915-33682157,33682235-33682297,33682414-33682477,
           33682740-33682810
          Length = 397

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 192 GGNFSKNVPTKESPPP 239
           GG FS+N PTK+S PP
Sbjct: 295 GGRFSRNEPTKDSAPP 310


>02_04_0090 -
           19643182-19643322,19644192-19644335,19644563-19644626,
           19644710-19644796,19645371-19645513,19645706-19645771,
           19645954-19646046,19646165-19646230,19646363-19646433,
           19646882-19646982,19647217-19647317,19647421-19647528,
           19647639-19648064
          Length = 536

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 234 PPSPRWRHDASSEERLGHIQ 293
           PPSPRWRHD  +  R G IQ
Sbjct: 58  PPSPRWRHDVRA--RAGTIQ 75


>04_04_0056 + 22406872-22407258,22408405-22409310
          Length = 430

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 429 RSAPAMRSLSYCRAPHSRVSLRAAPDSPARVPGSPP 536
           RS+  +R++   R+P S  S  A+P + A VPG+ P
Sbjct: 14  RSSALVRAILASRSPLSSSSCAASPTTAAPVPGTAP 49


>05_06_0277 +
           26885621-26886064,26886148-26886317,26887038-26887941,
           26888544-26888575,26888862-26888928,26889116-26889173,
           26889329-26889421,26890366-26890480,26890847-26890894,
           26891012-26891057,26891161-26891231,26891865-26891870,
           26891991-26892038,26892439-26892488,26892892-26893154
          Length = 804

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 465 RAPHSRVSLRAAPDSPARVPGSPPGR 542
           R  HSR S R+   SPAR  GSPP R
Sbjct: 214 RREHSRRSGRSRSRSPARDRGSPPRR 239


>05_06_0276 +
           26878732-26879574,26879920-26880387,26880800-26881021,
           26881153-26881278,26881309-26881573,26881719-26881936
          Length = 713

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 465 RAPHSRVSLRAAPDSPARVPGSPPGR 542
           R  HSR S R+   SPAR  GSPP R
Sbjct: 7   RREHSRRSGRSRSRSPARDRGSPPRR 32


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 23.4 bits (48), Expect(2) = 5.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 216 PTKESPPPSPRWRH 257
           P    PPP+P W H
Sbjct: 250 PFPSHPPPTPAWPH 263



 Score = 23.4 bits (48), Expect(2) = 5.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 231 PPPSPRWRHDASSEERLGHIQLSKVPSSLR 320
           PPP P W H  +    L     S VP + +
Sbjct: 278 PPPMPAWPHPGNQWPPLPPFHGSDVPPATK 307


>03_05_0176 +
           21546952-21547887,21548856-21548921,21549959-21550877,
           21551277-21551449,21551927-21552475
          Length = 880

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -3

Query: 226 SFVGTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLY-FRKIS 92
           S  GTF    P +  +K C+RK+ + S  ++++  T CL  F+ +S
Sbjct: 204 SKAGTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLS 249


>02_05_1113 + 34207997-34208380
          Length = 127

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 350 EAGCGKYRSHGPKARRCHHDRQAQSSPQRSG 442
           E GCG+ R  GP++R     R+A  +   SG
Sbjct: 64  EGGCGRGRRRGPRSRPARTARRAACAEDGSG 94


>02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253
          Length = 231

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = -2

Query: 422 TEPADRGDNAGPSD--RDSDIFRTLPPTLNP 336
           ++PAD  D++ P+D   DSD+  T PPT  P
Sbjct: 195 SDPADDADDSDPADCAADSDVAST-PPTARP 224


>12_02_0096 -
           13573612-13573632,13573846-13573884,13574160-13574493,
           13574660-13574830,13574913-13575730,13575812-13576114,
           13576352-13577085,13577174-13577303
          Length = 849

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 183 RLNGGNFSKNVPTKESPP--PSPRWRHDASSEERLGHIQLSKVPS 311
           R+N      N+P   +P   P+PR +HDAS  +       +KVP+
Sbjct: 330 RVNKVLADMNIPRVTTPAVHPTPRAQHDASPSQHRSSCASTKVPA 374


>10_07_0195 +
           13972656-13972970,13973518-13973848,13975312-13975463,
           13975573-13976280,13976424-13976615,13977264-13977425
          Length = 619

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 423 PHRSAPAMRSLSYCRAPHSRVSLRAAPDSPARVPGSP 533
           PH      +S    + PHS +SL    D P RV  SP
Sbjct: 403 PHPLRQTYQSTKMEKHPHSGISLYRRDDHPTRVSPSP 439


>04_04_0899 -
           29229812-29229929,29230009-29230179,29230262-29231094,
           29231176-29231637,29231716-29232186
          Length = 684

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 183 RLNGGNFSKNVPTKESPP--PSPRWRHDASSEERLGHIQLSKVPS 311
           R+N      N+P   +P   P+PR +HDAS  +       +KVP+
Sbjct: 252 RVNKVLADMNIPRVTTPAVQPTPRVQHDASPSQHRSSCASTKVPA 296


>12_02_0875 -
           23920023-23920967,23921045-23921599,23921678-23922083,
           23922175-23922452
          Length = 727

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 513 LGCLAPHAARLASEARDSTTTSAS 442
           +GC A   A +AS A ++TTTS+S
Sbjct: 1   MGCAASKGAAVASPAYEATTTSSS 24


>12_01_0442 + 3495333-3496484
          Length = 383

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +3

Query: 441 AMRSLSYCRAPHSRVSLRAA---PDSPARVPGSPPGRSGEEKFHSRLVEKL 584
           A+ SL   RAP +R +  A    PDSP   PG  P  S  + +  R   KL
Sbjct: 151 AVGSLPEHRAPAARTTTAAPASPPDSPIWTPGHKPPSSSPDIYLVRRTPKL 201


>08_01_0133 +
           1062365-1063057,1063210-1063318,1063914-1064005,
           1064399-1064560,1064718-1064834,1065029-1065127
          Length = 423

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 552 PRRFFPADYPEPLLGCLAPHAARLASEARDSTTTSASPERCGE 424
           PR   P D+P PLL   A  AA +AS       +  S   C +
Sbjct: 74  PRNRNPPDHPAPLLAAAAAAAAAVASPHAALALSGGSMGGCSD 116


>02_03_0223 +
           16570264-16570357,16570470-16570552,16570974-16571032,
           16571607-16571665,16572276-16572325,16573575-16573612,
           16574619-16574695,16575593-16576503
          Length = 456

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 326 RRRRGSTWEAGCGKYRSHGPKARRCHHDRQAQSSPQRSG 442
           R+R G+ W +G  + RS G  + R     Q +S   RSG
Sbjct: 402 RKRSGAQWRSGSARRRSGGGGSVRKRSCAQWRSGSARSG 440


>01_06_0116 -
           26595570-26596607,26596964-26598353,26599386-26599923,
           26600562-26601453
          Length = 1285

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 192 GGNFSKNVPTKESPPPSPRWRHDASS 269
           GG+FS   P    PPP PR R D SS
Sbjct: 628 GGHFSGTSPNHPLPPP-PRHRSDDSS 652


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,728,157
Number of Sequences: 37544
Number of extensions: 316964
Number of successful extensions: 1575
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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