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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C08f
         (346 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0868 - 32587618-32587875,32588239-32588318,32588518-325885...    32   0.14 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   0.18 
06_03_0824 + 25105450-25105482,25105649-25106485,25106580-251067...    29   1.3  
04_01_0184 - 2085271-2085387,2085642-2085730,2086582-2086813,208...    29   1.3  
03_02_0225 + 6565337-6565369,6565564-6565734,6566113-6566400,656...    29   1.3  
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609...    28   2.3  
06_01_0188 - 1464961-1466814                                           27   3.9  
02_02_0285 + 8582033-8582201,8582375-8582652,8582762-8583394           27   3.9  
06_03_0592 + 22585546-22588573,22588680-22589032                       27   5.2  
02_01_0448 + 3227721-3228968                                           27   5.2  
10_01_0092 - 1119203-1119502,1119612-1120412                           26   6.9  
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033     26   6.9  
12_01_0882 - 8495717-8495761,8496414-8496860                           26   9.1  
10_08_0077 + 14690894-14691030,14691258-14691936                       26   9.1  
03_01_0528 + 3966687-3967643                                           26   9.1  
02_02_0671 - 12811102-12811608                                         26   9.1  

>01_06_0868 -
           32587618-32587875,32588239-32588318,32588518-32588583,
           32589896-32590523
          Length = 343

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +2

Query: 200 GSMWKKCPG-RWPRSS*VHGPHSGCASAXVAEITVRWLPC 316
           G  W + PG  WPRS     P SGCA A  A    R  PC
Sbjct: 97  GRTWARPPGPTWPRSDLGGFPSSGCACAQGACGGARGCPC 136


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.5 bits (68), Expect = 0.18
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 165 LNNTRLELHRALEACGRSVQAGGPGQAKYT-ALTAAVLRQXLQRLPFGG 308
           +N+T L LH    A G +V  GG   + +T AL AA  R+  QR    G
Sbjct: 4   MNSTNLTLHLCSPAAGANVSGGGGSSSVFTRALHAAQARKMHQRKQLPG 52


>06_03_0824 +
           25105450-25105482,25105649-25106485,25106580-25106738,
           25106830-25106886,25106971-25107202,25107338-25107638,
           25107703-25107976,25108051-25108152,25108244-25108525
          Length = 758

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 165 LNNTRLELHRALEACGRSVQAGGPGQAKYT-ALTAAVLRQXLQRLPFGG 308
           +N+T   LH    A G +V  GG   + +T AL AA  R+  QR    G
Sbjct: 4   MNSTNPTLHLCSPAAGANVSGGGGSSSVFTRALHAAQARKMHQRKQLPG 52


>04_01_0184 -
           2085271-2085387,2085642-2085730,2086582-2086813,
           2086898-2086990,2087046-2087204,2087298-2088134,
           2088353-2088385
          Length = 519

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 165 LNNTRLELHRALEACGRSVQAGGPGQAKYT-ALTAAVLRQXLQRLPFGG 308
           +N+T   LH    A G +V  GG   + +T AL AA  R+  QR    G
Sbjct: 4   MNSTNPTLHLCSPAAGANVSGGGGSSSVFTRALHAAQARKMHQRKQLPG 52


>03_02_0225 +
           6565337-6565369,6565564-6565734,6566113-6566400,
           6566495-6566653,6566745-6566801,6566886-6567117,
           6567253-6567553,6567618-6567891,6567966-6568067,
           6568159-6568440
          Length = 632

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 165 LNNTRLELHRALEACGRSVQAGGPGQAKYT-ALTAAVLRQXLQRLPFGG 308
           +N+T   LH    A G +V  GG   + +T AL AA  R+  QR    G
Sbjct: 4   MNSTNPTLHLCSPAAGANVSGGGGSSSVFTRALHAAQARKMHQRKQLPG 52


>03_05_1150 -
           30758981-30759778,30759970-30760729,30760823-30760920,
           30761997-30762521
          Length = 726

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 6   NTFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLN 170
           NTFF Y    + + G L ++LV    +P  Q   A L  +  RL G  L   +LN
Sbjct: 68  NTFFTYRTQPLTISGILAQILV----LPAGQFMAAVLPSREVRLLGGRLGSFNLN 118


>06_01_0188 - 1464961-1466814
          Length = 617

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 159 GDLNNTRLELHRALEACGRSVQAGGPGQAKY 251
           G      LEL RAL AC  S+ AG    A Y
Sbjct: 208 GQAEREALELVRALTACADSLSAGNHEAANY 238


>02_02_0285 + 8582033-8582201,8582375-8582652,8582762-8583394
          Length = 359

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 180 LELHRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDL 335
           L  H+ L+       AG   Q +  A+ AA     LQRLPF  +L   A DL
Sbjct: 306 LASHQNLDQLFHGKVAGAHQQQQQMAMDAA---SSLQRLPFHHYLGLEAADL 354


>06_03_0592 + 22585546-22588573,22588680-22589032
          Length = 1126

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 188 PSSIGSMWKKCPGRWPRSS*VHGP 259
           PSSIG++     G W R++ ++GP
Sbjct: 479 PSSIGNLSSNLEGLWLRNNKIYGP 502


>02_01_0448 + 3227721-3228968
          Length = 415

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 259 SQRLCFGXCCRDYRSVASLHVA 324
           + R+CFG  CR +R+ A  H A
Sbjct: 41  ADRICFGATCRSWRTSAREHRA 62


>10_01_0092 - 1119203-1119502,1119612-1120412
          Length = 366

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -2

Query: 255 PCT*LDLGHLPGHFFHMLPMLDGVLVAYYLDRPF*DCCQQAFYVCK 118
           P T  ++  + G FF  +P  D VL+ Y L     D C +    CK
Sbjct: 241 PTTHSNIQFVGGDFFEFIPAADVVLLKYILHAWQDDDCVKILRRCK 286


>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
          Length = 1614

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 165 LNNTRLELHRALEACGRS-VQAGGPGQAK 248
           L+ T+LE+H A+++ GRS  +  GP  A+
Sbjct: 162 LHRTKLEMHAAVQSGGRSPKRLNGPSSAQ 190


>12_01_0882 - 8495717-8495761,8496414-8496860
          Length = 163

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 328 PARRARKPPNGNLCNXCRSTAAVRAVYLA*PGPPAWTL 215
           P RR+R PP+    +  R    VR +      PP  TL
Sbjct: 108 PPRRSRPPPSAEASDARRQPTVVRGLPQGGEAPPQETL 145


>10_08_0077 + 14690894-14691030,14691258-14691936
          Length = 271

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +3

Query: 54  LVKLLVYGDSVPKSQSKEAGLFYKHKRLAGN 146
           L+   +Y DS+P+ ++K+AG+  +H  +A +
Sbjct: 166 LLLRFMYTDSLPEMKNKDAGVMCQHLLVAAD 196


>03_01_0528 + 3966687-3967643
          Length = 318

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 257 PHSGCASAXVAEITVRWLPCTSRWRSVEG 343
           PH   ASA  A   +RWLP ++   +  G
Sbjct: 84  PHLRAASAAAAHQRLRWLPASAAAAAARG 112


>02_02_0671 - 12811102-12811608
          Length = 168

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 334 RSPARRARKPPNGNLCNXC-RSTAAVRAVYLA*PGPPAWTLLPHASN 197
           RS    A  PP    C+ C   TA  +A YL+ P PP   LLP  ++
Sbjct: 64  RSRGLTAASPPVHRHCHCCLLPTATAKAFYLS-PSPP---LLPFGAS 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,389,674
Number of Sequences: 37544
Number of extensions: 208627
Number of successful extensions: 622
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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