Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301B05f
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 213 5e-56
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 202 5e-53
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 192 5e-50
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.27
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 3.3
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 3.3
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 27 4.3
02_03_0106 + 15292869-15296138 27 4.3
06_01_1092 + 8966584-8967053,8967737-8967854,8968030-8968253,896... 27 5.7
04_04_1108 + 30961600-30962013,30963131-30964465 27 5.7
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 26 7.6
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 26 7.6
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 26 7.6
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 26 7.6
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 26 7.6
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 26 7.6
04_03_0635 + 18215241-18215489 26 7.6
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 26 7.6
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 213 bits (519), Expect = 5e-56
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 180
GRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +S
Sbjct: 2 GRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVS 61
Query: 181 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 354
SEALEA RI CNKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAF
Sbjct: 62 SEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 119
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 202 bits (494), Expect = 5e-53
Identities = 88/115 (76%), Positives = 100/115 (86%)
Frame = +1
Query: 10 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 189
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 190 LEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 354
LEA RI CNKY+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAF
Sbjct: 372 LEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAF 426
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 192 bits (469), Expect = 5e-50
Identities = 84/112 (75%), Positives = 97/112 (86%)
Frame = +1
Query: 19 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 198
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 199 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 354
RI CNKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAF
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 115
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.27
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 240
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 227 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 126
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 139 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 23
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 27.1 bits (57), Expect = 4.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 5 AGQQDATGTAKINRIRNRGSVGVYLIPRSVSSIWVRRERPLTTFHCACTWCP 160
A Q +TGT K + R G + L + V ++ P+ F AC W P
Sbjct: 204 AWSQSSTGTRKWMQYRPAGETSLTLPCQGVLNLIATGPTPMDVF--ACAWSP 253
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -1
Query: 266 LMRIWN*SFPQFFTRYLLQQIRPASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKI 93
L+ W+ +FP++ LL + R EL CS S C GK+ ++ +P+ +I
Sbjct: 1008 LIIFWSIAFPRWLE--LLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRI 1063
>06_01_1092 +
8966584-8967053,8967737-8967854,8968030-8968253,
8968352-8968588,8969122-8969275,8969356-8969438,
8969573-8969687,8969837-8969909,8970005-8970147
Length = 538
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = -1
Query: 170 SYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTPRQNLDFGYG 42
S D + T++ +SS++ + L + ++++ + R+NLDF +G
Sbjct: 230 SKQCDYEITYADRSSSMGI-LARDNMQLITADGERENLDFVFG 271
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -2
Query: 214 CSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSS 110
C + PP PL++ V + P+A + S + +++S
Sbjct: 103 CGAEIAPPPPLAAVVSVVAPPAAIPITSNRPAMTS 137
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 26.2 bits (55), Expect = 7.6
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -2
Query: 208 RYVLPPKPLSSAVHIRRTP--SARTVESRQR--SLSSYPNRRYGSWDQVHPDRTSISDTV 41
R LP PLS + +P S R + SR R SLS P+RR S + DR S
Sbjct: 273 RTSLPDHPLSHSRGGSPSPPISGRDMGSRGRRQSLSPTPSRRASSSHSIERDRLSSYSKA 332
Query: 40 YFCSTG 23
S+G
Sbjct: 333 SATSSG 338
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 219 VPRKELRKGSVPYPHETSPFPRYP 290
+PRK + +G+V E P PRYP
Sbjct: 23 LPRKTMPEGTVVRAGELRPRPRYP 46
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 26.2 bits (55), Expect = 7.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 28 YCKNKPYPKSRFCRGVPDPKIRIFDL--GKKRATVDDFPLCVHLVSDEYEQLSSE 186
+CK+ P KS + G+P P FD+ GK R ++ L +V+D + + E
Sbjct: 141 HCKDHPRAKSLY--GIPFPYFDTFDVIYGKDRTGREEEELSDEVVADMENENTDE 193
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 26.2 bits (55), Expect = 7.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 135 KVVNGRSLLTQIEDTDLGIRYTPTEP 58
+V+NG+ ++ +IE+ D Y P P
Sbjct: 211 QVINGQDIVQEIEEVDTDEHYQPKTP 236
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 28 YCKNKPYPKSRFCRGVPDPKIRIFDLGKKRA 120
+C +PYPK VPD ++ GK +A
Sbjct: 395 FCMYEPYPKGSLEDDVPDTTVQDMLCGKAKA 425
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 26.2 bits (55), Expect = 7.6
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = -2
Query: 277 KGEVSCGYGTDPFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNR 98
+G V TDP + + + P L + H+RR P A + +++ P+
Sbjct: 2399 EGTVDIDKITDPVQRQAMQDQIAYFGQTPSQLLTIPHMRRKPLAEVL--HLQTIFRNPS- 2455
Query: 97 RYGSWDQVHPDRTSISDTVYFCSTGSILL 11
S+ +PDR ++ + F S SI++
Sbjct: 2456 ELKSYLLPNPDRCNVPASTMFVSNDSIVV 2484
>04_03_0635 + 18215241-18215489
Length = 82
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -2
Query: 280 GKGEVSCGYG---TDPFRSSLRGTYCSRYVL 197
G+GE+ GYG P RS++ T SR VL
Sbjct: 28 GRGEIKAGYGDVWRQPARSAMDRTKSSRCVL 58
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 211 SRYVLPPKPLSSAVHIRRTPSARTVES 131
S + PP P SSA + RT SA TV S
Sbjct: 18 SDQLAPPPPPSSAQSLSRTASAETVLS 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,734
Number of Sequences: 37544
Number of extensions: 242665
Number of successful extensions: 725
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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