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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A06f
         (399 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0361 + 17207657-17207701,17208850-17209773                       30   0.77 
02_01_0679 - 5048653-5051394                                           29   1.8  
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    28   2.4  
12_01_0500 + 3966456-3968556,3968640-3969087,3969524-3969718,396...    28   3.1  
11_01_0780 - 6531579-6531608,6531732-6532064,6533219-6533325,653...    28   3.1  
02_01_0252 - 1657268-1657692,1657727-1658445,1658761-1659089,165...    28   3.1  
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115...    28   3.1  
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243...    27   4.1  
04_01_0409 - 5409018-5410268                                           27   5.5  
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323...    27   7.2  
05_05_0036 - 21758409-21758531,21758891-21759206,21759964-217611...    26   9.5  
04_04_1701 + 35470535-35471170,35471254-35471403,35471745-354720...    26   9.5  
03_05_0113 + 20958580-20958703,20958768-20959507                       26   9.5  

>10_08_0361 + 17207657-17207701,17208850-17209773
          Length = 322

 Score = 29.9 bits (64), Expect = 0.77
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -3

Query: 361 LMYVRKHIEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNK 206
           LMY  + +E+   +S    RN +  H LV P  +LH   N  G  ++ L  K
Sbjct: 129 LMYAGQQLEDNQLLSQCDLRNDQTFHVLVCPNDKLHVFINVRGEKTIGLETK 180


>02_01_0679 - 5048653-5051394
          Length = 913

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 211 NKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLED 101
           +KIP D+  +H  +    +KE L NK Y  V D + D
Sbjct: 252 SKIPTDLDTMHHGKLNDELKEVLSNKKYLIVLDDVWD 288


>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -3

Query: 292  NKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVND 113
            N H  +  M+R H+I  S   L  RL  +   + + LH+ + K  + +   NK+  +   
Sbjct: 1022 NPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKS--ESQK 1079

Query: 112  YLEDCTKW 89
             +ED  +W
Sbjct: 1080 EVEDIIRW 1087


>12_01_0500 +
           3966456-3968556,3968640-3969087,3969524-3969718,
           3969891-3970119
          Length = 990

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 17/61 (27%), Positives = 31/61 (50%)
 Frame = -3

Query: 283 KLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLE 104
           KL++ ++RL +    F   +  +Y K P+DVQ  H       + + +C K   K ND ++
Sbjct: 666 KLLLEVNRLLRPGGLFVWSATPVYRKTPEDVQIWH---DMAALTKSMCWKMVKKTNDTVD 722

Query: 103 D 101
           +
Sbjct: 723 E 723


>11_01_0780 -
           6531579-6531608,6531732-6532064,6533219-6533325,
           6534267-6534316,6535110-6537065,6537458-6538209
          Length = 1075

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 220 RLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTKWE 86
           R +N++P D     +      I++H+ +K Y+ V D L + T W+
Sbjct: 224 RRHNRLPAD--RCTVQDLIDNIRDHIQDKRYFIVIDDLWETTSWD 266


>02_01_0252 -
           1657268-1657692,1657727-1658445,1658761-1659089,
           1659223-1659375,1659430-1659561,1659748-1659852,
           1660020-1660193,1660283-1660352,1660458-1660639,
           1660738-1660847,1660948-1661052,1661153-1661231,
           1662128-1662168,1662283-1662358,1662455-1662589
          Length = 944

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 204 ILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLLCMSDILGNSSIC 344
           ++L R+T +     R  C   +   SL   + FL+ +S ++   SIC
Sbjct: 252 LVLSRKTPRSDKSIRAACRYFLIECSLAFIVAFLINVSVVVVAGSIC 298


>01_06_1097 +
           34507376-34507395,34509380-34511214,34511263-34511598,
           34511800-34513691
          Length = 1360

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -3

Query: 394 LXMPSQYIFENLMYVRKHIEEFPKMSDIHNRNTRNKHKLVV 272
           +  PS++  E+L  + + +   P+   + N N + KH+ V+
Sbjct: 816 MEFPSEFCNESLPVISRDLHPIPEERVVENFNVQEKHEAVI 856


>11_06_0760 +
           27017956-27018433,27018487-27019234,27023760-27024378,
           27030755-27032440
          Length = 1176

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 229 LSVRLYNKIPQ-DVQNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTKWE 86
           ++++  NK  + ++Q +      K ++EHL  K Y+ + D +   T WE
Sbjct: 376 INIQTMNKPGEKNIQTMKRDGLSKLLQEHLNQKRYFLLIDDVWSATTWE 424


>04_01_0409 - 5409018-5410268
          Length = 416

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -3

Query: 334 EFPKMSDIHNRNTRNKHKLVV----PMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRF 167
           E P+ +DIHN   R  HK +     P S L  IR     +   +  KI        I ++
Sbjct: 96  EKPRTNDIHNPTLRLMHKWIAITLFPRSNLRPIRGDELIIMFAMVRKIKISPVKCMIRQW 155

Query: 166 KKTIK 152
            ++IK
Sbjct: 156 LESIK 160


>09_03_0125 -
           12531409-12531442,12531577-12531668,12531747-12532337,
           12532454-12532789,12532899-12533156,12533867-12533971,
           12534625-12534702,12535464-12535542,12535649-12535723,
           12535828-12535946,12536042-12537106
          Length = 943

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +3

Query: 249 ILCNLLIGTTSLCLFLVFLLCMSDI--LGNSSIC 344
           ILC L  GTT+LC  LV +     +  + N ++C
Sbjct: 651 ILCTLSFGTTNLCGSLVSIYSCGSVSTIVNDTVC 684


>05_05_0036 -
           21758409-21758531,21758891-21759206,21759964-21761121,
           21761236-21761333
          Length = 564

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 163 KTIKEHLCNKAYYKVNDYLEDCTK 92
           KT +EH  N  YY +  Y+  C K
Sbjct: 377 KTTQEHCPNLQYYYLGYYIHSCNK 400


>04_04_1701 +
           35470535-35471170,35471254-35471403,35471745-35472015,
           35472152-35472262,35472476-35472650,35472748-35473020,
           35473251-35473494,35473623-35473708,35473752-35473968
          Length = 720

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -3

Query: 283 KLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVND 113
           KL++ + RL +    F   +  +Y K+P+DV+   I     T+   +C +   KV D
Sbjct: 355 KLLLELDRLLRPGGYFVWSATPVYQKLPEDVE---IWEAMSTLTRSMCWEMVNKVKD 408


>03_05_0113 + 20958580-20958703,20958768-20959507
          Length = 287

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -3

Query: 328 PKMSDIHNRNTRNKHKLVV----PMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKK 161
           P+ +DIHN   R  HK +     P+S L  IR     +   +  KI        I ++ +
Sbjct: 65  PRTNDIHNPTLRLMHKWIAMTLFPISDLRPIRRDELIIMFTMVRKIKISPVKCMIRQWLE 124

Query: 160 TIK 152
           +IK
Sbjct: 125 SIK 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,676,129
Number of Sequences: 37544
Number of extensions: 185480
Number of successful extensions: 476
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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