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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0040
         (740 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272...   125   4e-29
07_01_0578 + 4295386-4296489,4297394-4297507                          124   6e-29
10_02_0199 + 6668902-6669293,6669825-6669882                           34   0.14 
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239...    33   0.18 
08_02_1278 - 25838146-25839411                                         32   0.55 
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067           31   1.3  
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216     30   2.2  
02_04_0457 + 23093020-23093343,23093798-23093806                       29   5.1  
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163...    29   5.1  
10_07_0029 + 12031711-12032464,12044289-12044386                       28   6.8  
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510...    28   6.8  
02_04_0073 - 19471254-19472681                                         28   6.8  
07_01_0469 - 3552409-3553368                                           28   9.0  
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16...    28   9.0  
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068...    28   9.0  
04_01_0244 - 3194141-3195091,3195301-3195312                           28   9.0  
03_06_0721 - 35742380-35742736,35743206-35743398,35743497-357435...    28   9.0  
03_03_0125 - 14630078-14630136,14630197-14631160                       28   9.0  
03_03_0122 - 14617879-14618871                                         28   9.0  
03_01_0092 - 731069-731434,731569-733080                               28   9.0  
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971...    28   9.0  

>03_06_0298 -
           32925441-32925998,32926371-32926730,32927161-32927230,
           32927642-32927797,32929181-32929242,32929339-32929352,
           32930421-32930520,32931474-32932574
          Length = 806

 Score =  125 bits (301), Expect = 4e-29
 Identities = 53/59 (89%), Positives = 56/59 (94%)
 Frame = +3

Query: 3   VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
           VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 57  VSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +1

Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
           +GS     F ++PGV+            APGGHLGRFVIWT+ AF +LD ++G + TP+ 
Sbjct: 217 EGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTECAFKKLDEVYGGFDTPAL 276

Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
           +KK F LP+PKMAN DL+RL+ SDE++
Sbjct: 277 KKKGFVLPRPKMANADLSRLINSDEVQ 303



 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
 Frame = +2

Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
           PS   ARGH IE +PE PLVV+D ++ I KT Q++  L+++ A++D  K   S  +RAGK
Sbjct: 137 PSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGK 196

Query: 422 GKMRNRRRIQRKGPLIIFNKD-QGLTRAFRTSP 517
           GKMRNRR I RKGPLI++  +   + +AFR  P
Sbjct: 197 GKMRNRRYINRKGPLIVYGTEGSKVVKAFRNLP 229


>07_01_0578 + 4295386-4296489,4297394-4297507
          Length = 405

 Score =  124 bits (300), Expect = 6e-29
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +3

Query: 3   VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
           VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 58  VSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116



 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = +1

Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
           +GS     F ++PGV+            APGGHLGRFVIWT+SAF +L+ ++G+++ PS 
Sbjct: 218 EGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSL 277

Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
           +KK F LP+PKMAN DL R++ SDE++
Sbjct: 278 KKKGFILPRPKMANADLGRIINSDEVQ 304



 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +2

Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
           PS   ARGH IE +PELPLV++D  + I KT QA+  L+++ A++D  K   S  +R GK
Sbjct: 138 PSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGK 197

Query: 422 GKMRNRRRIQRKGPLIIFNKD-QGLTRAFRTSP 517
           GKMRNRR I RKGPLI++  +   + +AFR  P
Sbjct: 198 GKMRNRRYINRKGPLIVYGTEGSKIVKAFRNLP 230


>10_02_0199 + 6668902-6669293,6669825-6669882
          Length = 149

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +3

Query: 33  AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 143
           A+SW TGRA A + R R GG  R    A  N   G R
Sbjct: 36  AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72


>06_02_0298 +
           13921310-13921834,13921923-13922063,13923601-13923951,
           13924071-13924130,13924261-13924380,13924569-13924718
          Length = 448

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 139 PPRHMLPKAP*PDLWVPPP 83
           PPRH++P+ P P  WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325


>08_02_1278 - 25838146-25839411
          Length = 421

 Score = 31.9 bits (69), Expect = 0.55
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 361 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 254
           A +E   LF L+D+LD V   +G+L  LF+  S++L
Sbjct: 89  AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124


>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
          Length = 472

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = -2

Query: 511 CAESASQTLILVEDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 344
           C  +  +     ED +GS+ +  DTT++ + +L++ ++L LV +K ++P L    E+D
Sbjct: 224 CVHNEDELHAFFEDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281


>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
          Length = 1030

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 562 APG--GHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 702
           APG  G  GR+V+   SA   LDP F SW   S++ K F++ +   A++
Sbjct: 670 APGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEISHASS 717


>02_04_0457 + 23093020-23093343,23093798-23093806
          Length = 110

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 18  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 122
           G + S   W  G A A    VRGGG  RSG G  G
Sbjct: 76  GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109


>01_07_0167 -
           41613834-41613842,41614060-41615056,41615456-41616336,
           41616437-41616508,41616590-41616649,41616736-41616885,
           41616974-41617021,41617107-41617181,41617266-41617411,
           41617514-41617594,41617703-41617810,41618046-41618057,
           41618137-41618148,41618499-41618546,41619021-41619105
          Length = 927

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 427 NAQPSSYPA*GTP--HNLQQGSGSDSRFPHI 513
           N  P      G+P  +NLQ+G GS S+ PH+
Sbjct: 85  NMAPGRLAYAGSPNIYNLQEGEGSSSKMPHL 115


>10_07_0029 + 12031711-12032464,12044289-12044386
          Length = 283

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 144 YVHHDTCYRRHPDRTYG 94
           Y+ HDT YR HP R  G
Sbjct: 94  YIFHDTAYRYHPRRANG 110


>03_02_0027 +
           5100865-5100878,5102241-5102708,5102795-5103021,
           5103670-5104577
          Length = 538

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +2

Query: 548 TS*SWLREVILDVSSSGLSPHSAGLTPYSGHGRHHQNKRR----TSTCPNRRWPTLTSHV 715
           +S S+LR + LD+SSS  +P S+       H  HHQ   +     S+ P   WP      
Sbjct: 376 SSSSFLRCLGLDMSSSSSAPPSSSGQQQQHHHHHHQETMQVPLPASSLP--EWPPRLQPE 433

Query: 716 FSSLMRSG 739
            S ++ SG
Sbjct: 434 PSPMLSSG 441


>02_04_0073 - 19471254-19472681
          Length = 475

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 602 SPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMR 733
           +P   G +P S HG HH++++   T  N +   L   V   ++R
Sbjct: 20  APRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLR 63


>07_01_0469 - 3552409-3553368
          Length = 319

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 144 YVHHDTCYRRHPDRTYG 94
           Y+ HDT YR HP R  G
Sbjct: 94  YIFHDTAYRFHPRRASG 110


>07_01_0024 +
           159839-159923,160395-160442,160884-160895,161347-161427,
           161530-161675,161918-161965,162054-162203,165647-165706,
           165788-165859,165960-166409,166640-166839,167239-168236,
           168676-168683,169057-169230,169341-169659,169748-169824,
           169897-169966,170040-170111,170204-170418,170540-170665,
           170751-171046,171133-171157,171163-171303,171400-171498,
           171571-171702,171793-171912
          Length = 1407

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = +1

Query: 457 GTP--HNLQQGSGSDSRFPHI 513
           G+P  +NLQ+G GS S+ PH+
Sbjct: 55  GSPNIYNLQEGEGSSSKMPHL 75


>06_03_1205 -
           28406183-28406218,28406462-28406548,28406769-28406830,
           28407968-28408184,28408793-28408957,28409145-28409250,
           28409830-28410071,28410493-28410605,28410848-28411043,
           28411681-28411827,28412034-28412218,28412478-28412592,
           28413237-28413728
          Length = 720

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 120 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 37
           R H D  +G+HHH H   G  H   P +
Sbjct: 68  RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94


>04_01_0244 - 3194141-3195091,3195301-3195312
          Length = 320

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 144 YVHHDTCYRRHPDRTYG 94
           Y+ HDT YR HP R  G
Sbjct: 98  YIFHDTAYRFHPRRANG 114


>03_06_0721 -
           35742380-35742736,35743206-35743398,35743497-35743552,
           35745951-35746727
          Length = 460

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -3

Query: 594 DDETSKMTSRSQLQEVQLVNIQELHTGDVRK 502
           D E+S + ++ QL E +L+N++++  GD+ K
Sbjct: 286 DVESSGVPAKLQLLEQELINLEKIGNGDLSK 316


>03_03_0125 - 14630078-14630136,14630197-14631160
          Length = 340

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +1

Query: 580 GRFVIWTQSAFGRL-DPLFGSWK 645
           G FV+W   AFG L   L G+WK
Sbjct: 127 GGFVVWADRAFGPLAGSLLGTWK 149


>03_03_0122 - 14617879-14618871
          Length = 330

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +1

Query: 580 GRFVIWTQSAFGRL-DPLFGSWK 645
           G FV+W   AFG L   L G+WK
Sbjct: 124 GGFVVWADRAFGPLAGSLLGTWK 146


>03_01_0092 - 731069-731434,731569-733080
          Length = 625

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 136 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 44
           P H++P  P P L  P P+++      R  P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297


>01_06_0160 -
           27095727-27096008,27096164-27096652,27096983-27097132,
           27097656-27097920,27097995-27098274,27100311-27100388,
           27100597-27101240,27101334-27101412,27101489-27101612,
           27101782-27101882,27102870-27103068
          Length = 896

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 612 ECGLSPDDETSKMTSRSQLQEVQ 544
           +CG+ PD+  S++ S+   QEV+
Sbjct: 51  DCGMDPDEAVSRLLSQDTFQEVK 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,500,301
Number of Sequences: 37544
Number of extensions: 474913
Number of successful extensions: 1848
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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