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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30003
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   213   1e-55
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   211   3e-55
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768...    31   0.86 
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    31   1.1  
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415           30   2.0  
05_04_0084 - 17788077-17789240                                         29   3.5  
04_04_1146 + 31249488-31249722,31250145-31250236,31251158-312512...    29   4.6  
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444...    29   4.6  
02_01_0475 + 3422629-3422695,3422960-3423216                           28   6.0  
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871...    28   8.0  

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  213 bits (519), Expect = 1e-55
 Identities = 102/211 (48%), Positives = 140/211 (66%)
 Frame = -2

Query: 680 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEP 501
           + AAYSHELPRYG++VGLTNYAAAY TG                         ++Y VEP
Sbjct: 73  MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEP 132

Query: 500 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 321
            D     FR  LDVGL RTTTG RVFGA+KGA+DGGL++PHS KRF G+  + K+ ++++
Sbjct: 133 ADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDI 191

Query: 320 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK 141
           HR +I+G HVA+YMRS+ +++ + F+  FS+Y+K G+ AD +EA+YKK H AIRADP+  
Sbjct: 192 HRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPT-M 250

Query: 140 KKELKKDSVKQKRWNKRKLTLAERKNRIKQK 48
            K  KK+    KR+N +KLT  +RK  + ++
Sbjct: 251 AKSTKKEPATHKRYNLKKLTYEQRKASLVER 281


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  211 bits (516), Expect = 3e-55
 Identities = 101/211 (47%), Positives = 140/211 (66%)
 Frame = -2

Query: 680 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEP 501
           + AAYSHELPRYG++VGLTNYAAAY TG                         ++Y VEP
Sbjct: 73  MAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEP 132

Query: 500 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 321
            D     FR  LDVGL RTTTG RVFGA+KGA+DGGL++PHS KRF G+  + K+ ++++
Sbjct: 133 ADERR-PFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDI 191

Query: 320 HRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHK 141
           HR +I+G HVA+YMRS+ +++ + F+  FS+Y+K G+ AD +E++YKK H AIRADP+  
Sbjct: 192 HRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPT-M 250

Query: 140 KKELKKDSVKQKRWNKRKLTLAERKNRIKQK 48
            K  KK+    KR+N +KLT  +RK  + ++
Sbjct: 251 AKSTKKEPATHKRYNLKKLTYEQRKASLVER 281


>10_04_0022 +
           7687383-7687670,7688479-7688556,7689456-7689535,
           7689876-7690095,7690444-7690677
          Length = 299

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
 Frame = -2

Query: 293 VAEYMRSLEQD--DEDSFKRQFSKYIKLGVTA--DAIEAIYKKAHEAIRADPSHKKKELK 126
           V E +R   +D  + +  K +  + ++ G+    D ++A  +K  E    +  HK ++ +
Sbjct: 167 VEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARHKAEQER 226

Query: 125 KDSVKQKRW---NKRKLTLAERKNRIKQKKASF-----IKRLQDQAE 9
           ++  +  R    N+RK+  A+RK  ++Q++        ++R+Q Q E
Sbjct: 227 REREELDRMLEENRRKVEEAQRKEALEQQQKELERFLELERIQKQRE 273


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = -2

Query: 143 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 45
           KKK+ KK   K+K+ NK+K    ++K + K+KK
Sbjct: 74  KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -2

Query: 188 IYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFI 33
           + KK  +  +     KKK+ KK + K+K+  K+K    ++K R    KA  I
Sbjct: 66  VMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRWPSNKAQHI 117



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 143 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 27
           KKK+ KK   K+K+  K+K    ++K + K+KK    KR
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108


>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
          Length = 126

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -2

Query: 197 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 45
           +E   KKA   ++  P  KKK+ KK   K+K+  K+K    E ++ ++Q+K
Sbjct: 40  LELRKKKAKAKVKKKP--KKKKNKKAKKKKKKKKKKKKEEEEEESDVRQQK 88


>05_04_0084 - 17788077-17789240
          Length = 387

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = -2

Query: 182 KKAHEAIRADPSHKKKELKKDSVKQKR----WNKRKLTLAERKNRIKQKKASFIKRLQDQ 15
           + A E +  DP   K+ +KKD  +Q++    W +R+  + ++K   + K+   I+   +Q
Sbjct: 300 RAAGEKVHDDPKLIKESMKKDKKRQQKHAEQWKERQKMVDKQKKERQSKRTENIRERANQ 359


>04_04_1146 +
           31249488-31249722,31250145-31250236,31251158-31251209,
           31251377-31251477,31251587-31252020,31252453-31252507,
           31252614-31252667,31252774-31253190
          Length = 479

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
 Frame = -2

Query: 404 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRS-LEQDDEDSFKRQFSK 228
           VDG  +VP    +  G DA ++   A  HR  +   HV   ++  L   + D F    + 
Sbjct: 329 VDGDGSVPVESAKADGLDAVARVGVAADHRGIVCDRHVFRIIQHWLHAGEPDPFYDPLND 388

Query: 227 YIKLGVTADAIEAIYKKAHE--AIRAD---PSHKKKELKK 123
           Y+ L  TA  IE  ++K  +  ++R D    SH+  E K+
Sbjct: 389 YVIL-PTAFEIEKYHEKHGDITSVREDWEIISHRDDESKR 427


>02_01_0598 +
           4440018-4440070,4440627-4440693,4440794-4440926,
           4441075-4441120,4442470-4442521,4442601-4442753,
           4443338-4443457,4443549-4443714,4443822-4443934,
           4444049-4444120,4444992-4445213,4445270-4445317,
           4445639-4445697,4445809-4445887,4445982-4446119,
           4446327-4446551,4446643-4447430,4447548-4447723,
           4447911-4448169,4448646-4448707,4451055-4451212,
           4451618-4451743,4452197-4452260,4452386-4452494,
           4452607-4452760,4453055-4453178,4453257-4453333,
           4453442-4453494,4453673-4453727,4453833-4454021
          Length = 1379

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -2

Query: 218 LGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNK 93
           LG++  A+EA YK+++E+  A+P   KK      +   +W++
Sbjct: 748 LGLSHYAMEAGYKRSNESTPAEPVPSKKPKVDPVLPASKWSR 789


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -2

Query: 221 KLGVTADA----IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIK 54
           +LG   DA    ++ + + A+     +   KKK+ KK   K+K+  K+K    ++K + K
Sbjct: 14  RLGTDLDAYGFRVQVVLQLAYTIFGFEEGKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNK 73

Query: 53  QKKA 42
              A
Sbjct: 74  LSSA 77


>02_04_0562 -
           23886272-23886357,23886456-23886571,23887045-23887127,
           23887683-23887829,23887946-23887993,23888166-23888384,
           23889370-23889541,23889636-23889700,23890386-23890512,
           23891358-23891450,23891520-23891629,23891722-23891868,
           23892161-23892473,23892580-23893178
          Length = 774

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 150 IPQEERVKERLGQTEALEQTQANIGREEKQNQAKE 46
           +P E+ V ER  + E LE  +  I  EEK+ + +E
Sbjct: 518 LPSEDSVSERRRKLEFLEMQEELIKEEEKKKEKEE 552


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,338,610
Number of Sequences: 37544
Number of extensions: 326630
Number of successful extensions: 1093
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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