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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30038
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345...    61   9e-10
02_04_0336 + 22121913-22122111,22122295-22122344,22122538-221226...    54   1e-07
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76...    52   4e-07
03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447     48   5e-06
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791...    47   2e-05
04_04_0115 + 22868554-22868749,22868863-22868912,22870009-228701...    38   0.010
06_02_0231 - 13286918-13287388                                         30   1.5  
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45...    29   2.6  
03_01_0566 - 4184379-4184491,4184616-4184726,4184800-4184889,418...    29   2.6  
04_04_0187 - 23411085-23411477,23411626-23411631                       29   4.6  
08_01_0054 - 367770-370166                                             28   6.0  

>10_01_0315 -
           3454846-3455465,3455562-3455663,3455828-3455954,
           3456698-3456727,3456828-3456877,3457004-3457106
          Length = 343

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
 Frame = +2

Query: 341 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWN---STVDGTKVIFSYLSKDGEEGYPG 508
           KF+++G  Y LA N G + LHGG+ GF+K  W+      +   + F Y SKDGEEGYPG
Sbjct: 83  KFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVERKSECPSITFQYHSKDGEEGYPG 141



 Score = 32.3 bits (70), Expect = 0.37
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 169 SVSVIXYGATIQSIQVPDKYGITSDVVLG 255
           +  +  +GATI S+ VPD +G  +DVVLG
Sbjct: 15  TAKIAAWGATITSLIVPDAHGNLADVVLG 43



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 502 PGYLITNITYEVTDDNALYVDFXSXXXXXXXXXXXX-HSYFNLAGHDTG 645
           PG +    TY + D   L +D  +             H+Y+NLAGH++G
Sbjct: 140 PGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWNLAGHNSG 188


>02_04_0336 +
           22121913-22122111,22122295-22122344,22122538-22122661,
           22122810-22122917,22123610-22124265
          Length = 378

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
 Frame = +2

Query: 341 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWN-----STVDGTKVIFSYLSKDGEEGYP 505
           +F++DG TY+L  N G + LHGG  GF+K  W      +  D  ++   Y S DGE+G+P
Sbjct: 104 RFTLDGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVAGGDSPRITLYYHSFDGEQGFP 163

Query: 506 G 508
           G
Sbjct: 164 G 164



 Score = 35.5 bits (78), Expect = 0.040
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +1

Query: 166 FSVSVIXYGATIQSIQVPDKYGITSDVVLG 255
           FS+ V  +GATI S+ +PD  G  +DVVLG
Sbjct: 46  FSIRVTNWGATIMSVILPDSKGNLADVVLG 75



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRI 332
           G+D +  YVN  T Y G  +GR ANRI
Sbjct: 75  GYDTVAEYVN-GTAYFGGLIGRVANRI 100


>09_01_0042 +
           764349-764763,764853-764902,765096-765172,766179-766236,
           767481-767607,768665-768769,768842-769424,769470-769775,
           770048-770139,770391-770440
          Length = 620

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +2

Query: 341 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWNSTV----DGTKVIFSYLSKDGEEGYPG 508
           KF+++   Y LA N   + LHGG  GF+K  W        +   + F Y SKDGEEG+PG
Sbjct: 222 KFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKGENPSITFKYYSKDGEEGFPG 281



 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 190 GATIQSIQVPDKYGITSDVVLG 255
           GAT+ S+ VPD  G+  DVVLG
Sbjct: 126 GATVTSLLVPDNNGVLGDVVLG 147



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 270 GYVNRNTPYLGTTVGRCANRI 332
           G  N  +PY G  VGR ANRI
Sbjct: 198 GVPNGTSPYFGCIVGRVANRI 218


>03_03_0155 - 14933469-14934335,14934529-14934578,14935435-14935447
          Length = 309

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
 Frame = +2

Query: 341 KFSIDGTTYQLANNIGKDHLHGGINGFNKANWN----STVDGTKVIFSYLSKDGEEGYPG 508
           +F++ G  +    N GK+ LHGG  GFN+  W+    +T     + F Y S DGE+G+PG
Sbjct: 42  RFTVKGHAFHTYKNDGKNTLHGGHRGFNQVFWSVRERATGHFPYITFYYRSYDGEQGFPG 101



 Score = 33.5 bits (73), Expect = 0.16
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRIGG 338
           G+ ++  YVN +T Y G  VGR ANRI G
Sbjct: 13  GYKDIGSYVN-DTTYFGALVGRVANRIAG 40


>04_04_0116 +
           22877296-22877482,22877578-22877627,22879057-22879180,
           22879266-22879373,22879462-22880084
          Length = 363

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = +2

Query: 323 QQDRRTKFSIDGTTYQLANNIGKDHLHGGINGFNKANWN-----STVDGTKVIFSYLSKD 487
           Q+  R +F +DG  Y    N G++ +HGG  GF+K  W         D   +   Y S D
Sbjct: 94  QRIARGRFVLDGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYVGGGDSPYITLYYRSFD 153

Query: 488 GEEGYPG 508
           GE+G+PG
Sbjct: 154 GEQGFPG 160



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +1

Query: 127 ETVSKFTWRASDGFSVSVIXYGATIQSIQVPDKYGITSDVVLGL 258
           +TV ++  R  D FSV +  +GAT+ S+ +PD  G  +DVVLGL
Sbjct: 30  KTVGEYVLRKGD-FSVKITNWGATMMSVVLPDSKGNLADVVLGL 72


>04_04_0115 +
           22868554-22868749,22868863-22868912,22870009-22870195,
           22870226-22870333,22872501-22873165
          Length = 401

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +1

Query: 106 DFGQHHGETVSKFTWRASDGFSVSVIXYGATIQSIQVPDKYGITSDVVLG 255
           D  +    TV  +  R  D FS+ V  +GA I S+ +PD  G   DVVLG
Sbjct: 26  DAAERKATTVGVYELRKGD-FSIRVTNWGAVIMSVVLPDSRGKLDDVVLG 74



 Score = 31.5 bits (68), Expect = 0.65
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 252 GFDELDGYVNRNTPYLGTTVGRCANRI 332
           G+D +  YVN +T Y G  VGR ANRI
Sbjct: 74  GYDTIAEYVNSST-YFGALVGRVANRI 99



 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 335 RTKFSIDGTTYQLANNIGKDHLHGGINGF 421
           + +F +DG  Y L  N GK+ LHG +  F
Sbjct: 101 KARFVLDGKAYHLYPNDGKNTLHGILEKF 129


>06_02_0231 - 13286918-13287388
          Length = 156

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -2

Query: 374 RVDKSCRRC*ILSADPVGTAADRGP*VRCVSVHVPVEFVKPRTTSLVIPYL 222
           RV     RC +L   P  T+A R    RC S+  P   V P  + LV P L
Sbjct: 37  RVAGHAARCLLLRLRPPLTSAGRNGQPRCSSLQYPNGLVPPSHSDLVAPVL 87


>08_01_0066 -
           455589-455687,455902-455976,456531-456677,457158-457292,
           457380-457508,457719-457814,458212-458403
          Length = 290

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 364 SRAVDAEFCPPILLAQRPTVVPKYGVFLFTYPSSS 260
           S A  A   PP+L A+RPTV  + G+FL   P++S
Sbjct: 4   SMAATATLSPPVLSAERPTV--RGGLFLPPSPATS 36


>03_01_0566 -
           4184379-4184491,4184616-4184726,4184800-4184889,
           4184996-4185113
          Length = 143

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 76  IINMVTLNVEDFGQHHGETVSKFTWR 153
           I ++VTL   D  QHHG++  KFT R
Sbjct: 82  IRSLVTLAFADLLQHHGQSARKFTTR 107


>04_04_0187 - 23411085-23411477,23411626-23411631
          Length = 132

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 540 RRQCLVCRLXVDDNXEDRCKSDEPFVF*FGWPRYWCPRDLQPYL--CYKR 683
           ++ C    L V++  E+  K  EP      WP YWCP    P    CY R
Sbjct: 62  KKVCYAEILLVEEEKEEEEKK-EPECKPCYWPPYWCPPPEDPTCKPCYPR 110


>08_01_0054 - 367770-370166
          Length = 798

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 342 NSASTARLINSLTTLGKIIYMAGLMDLIRRIGIPP 446
           NSA+   L++   T G ++ M  L+D++ R GI P
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP 376


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,659
Number of Sequences: 37544
Number of extensions: 366160
Number of successful extensions: 887
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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