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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30035
         (608 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624...   132   2e-31
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407...   132   2e-31
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408...   127   8e-30
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600...    31   0.71 
03_06_0371 + 33435936-33436472,33436554-33436741,33437146-334372...    28   6.7  
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747...    28   6.7  

>11_01_0740 +
           6243517-6243526,6244822-6245323,6245415-6245496,
           6245741-6245821
          Length = 224

 Score =  132 bits (319), Expect = 2e-31
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   IFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKXLVKXXGKDQFHIRMRLH 182
           I+D+G K+  VD+FP CVHLVS E E +SSEALEA RI CNK + K  GKD FH+R+R+H
Sbjct: 33  IYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVH 92

Query: 183 PFHVIRINKMLSCAGADRLQTGM 251
           PFHV+RINKMLSCAGADRLQTGM
Sbjct: 93  PFHVLRINKMLSCAGADRLQTGM 115



 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/81 (55%), Positives = 54/81 (66%)
 Frame = +2

Query: 257 AFGKPQGTVXRVRXGQPIMSVRSSDRWXAQVIEALRRAKFKFPGRQKXYVSXXWGXTKYX 436
           AFGKPQGT  RV  GQ ++SVR  +       EALRRAKFKFPGRQK   S  WG TK+ 
Sbjct: 118 AFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFT 177

Query: 437 RDEFEKLREEGRLANDGXIVQ 499
           R+E+ KL+ EGR+ +DG   Q
Sbjct: 178 REEYVKLKAEGRIMSDGVNAQ 198


>03_02_0897 -
           12239375-12239458,12240035-12240116,12240213-12240714,
           12241150-12241303,12241458-12241629,12242237-12242443,
           12242926-12243323
          Length = 532

 Score =  132 bits (319), Expect = 2e-31
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   IFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKXLVKXXGKDQFHIRMRLH 182
           IFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNK + K  GKD FH+R+  H
Sbjct: 340 IFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLRVCAH 399

Query: 183 PFHVIRINKMLSCAGADRLQTGM 251
           P+HV+RINKMLSCAGADRLQTGM
Sbjct: 400 PYHVLRINKMLSCAGADRLQTGM 422



 Score = 95.5 bits (227), Expect = 3e-20
 Identities = 45/77 (58%), Positives = 53/77 (68%)
 Frame = +2

Query: 257 AFGKPQGTVXRVRXGQPIMSVRSSDRWXAQVIEALRRAKFKFPGRQKXYVSXXWGXTKYX 436
           AFGKP GT  RVR GQ ++SVR  D   A   EALRRAKFKFPGRQ+   S  WG T++ 
Sbjct: 425 AFGKPTGTCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFK 484

Query: 437 RDEFEKLREEGRLANDG 487
           RDE+ KL+ EGR+  DG
Sbjct: 485 RDEYLKLKSEGRIVPDG 501


>05_01_0490 +
           4083768-4083775,4083845-4084336,4084441-4084522,
           4086671-4087357,4087555-4087813,4088435-4088558,
           4089474-4089564
          Length = 580

 Score =  127 bits (306), Expect = 8e-30
 Identities = 57/83 (68%), Positives = 68/83 (81%)
 Frame = +3

Query: 3   IFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKXLVKXXGKDQFHIRMRLH 182
           I+D+G K+  VD+F  CVHLVS E E ++SEALEA RI CNK + K  GKD FH+R+R+H
Sbjct: 29  IYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVH 88

Query: 183 PFHVIRINKMLSCAGADRLQTGM 251
           PFHV+RINKMLSCAGADRLQTGM
Sbjct: 89  PFHVLRINKMLSCAGADRLQTGM 111



 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 44/77 (57%), Positives = 51/77 (66%)
 Frame = +2

Query: 257 AFGKPQGTVXRVRXGQPIMSVRSSDRWXAQVIEALRRAKFKFPGRQKXYVSXXWGXTKYX 436
           AFGKPQGT  RV  GQ ++SVR          EALRRAKFKFPGRQK   S  WG TK+ 
Sbjct: 114 AFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFS 173

Query: 437 RDEFEKLREEGRLANDG 487
           RDE+ +L+ EGR+  DG
Sbjct: 174 RDEYVRLKSEGRIMPDG 190


>10_08_0141 +
           15159160-15159306,15159708-15159815,15159958-15160006,
           15160067-15160182,15160358-15160399,15161026-15161442,
           15162356-15162509,15162911-15162975,15163793-15163870,
           15163951-15164061,15164227-15164271,15164677-15164850,
           15165383-15166335,15166471-15166681,15167037-15167196,
           15168786-15169174
          Length = 1072

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 30  TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKXLVKXXG 149
           T D  P C +HL SD Y   S E ++AG+  C   L K  G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627


>03_06_0371 +
           33435936-33436472,33436554-33436741,33437146-33437245,
           33437360-33437545,33438977-33439186,33439772-33439959,
           33440083-33440341
          Length = 555

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 453 SCVKRAASLMTAXLCSTARTWTSRRLEE 536
           S V+RAA++ TA LC  A  W +  +E+
Sbjct: 516 SVVRRAAAVSTAVLCFAASRWLASFIEK 543


>02_05_1272 +
           35373843-35374031,35374343-35374490,35374586-35374704,
           35374992-35375121,35375122-35375201
          Length = 221

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +2

Query: 245 WDACAFGKPQGTVXRVRXGQPIMSVRSSDRWXAQVIEALRRAKFKFPGRQKXYVSXXW 418
           W +C     +G        Q     ++ + +  +++EAL+  K   PG  K Y+S  W
Sbjct: 132 WSSCTKSSNRGNFHPSSILQTSKPDKTRNSYPVEILEALQSCKQ--PGSNKPYISFPW 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,660,617
Number of Sequences: 37544
Number of extensions: 287244
Number of successful extensions: 729
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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