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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30005
         (488 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0630 + 19104678-19105463,19106169-19106348,19107775-191078...   101   3e-22
09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841    100   5e-22
08_02_1315 + 26083856-26083945,26084093-26084226,26084753-260848...   100   5e-22
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245...    97   7e-21
03_05_0802 - 27823213-27823701,27823911-27823959,27824053-278241...    27   8.1  
03_05_0796 + 27787401-27788831                                         27   8.1  
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922...    27   8.1  
03_01_0438 + 3399203-3399297,3399389-3399480,3399638-3399750,340...    27   8.1  

>09_04_0630 +
           19104678-19105463,19106169-19106348,19107775-19107864,
           19108777-19108958,19109968-19109974,19111763-19111833,
           19112188-19112224,19112433-19112603
          Length = 507

 Score =  101 bits (242), Expect = 3e-22
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = +1

Query: 34  ETYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPN 213
           +TY+M + P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPN
Sbjct: 319 DTYEMVV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPN 377

Query: 214 IGYGSNKKTRHMLP 255
           IGYGS+KKTRH LP
Sbjct: 378 IGYGSDKKTRHYLP 391



 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 246 YAPNGFRKVLVHNVKELEILMMXNR 320
           Y PN F+K +VHNV ELE+LMM NR
Sbjct: 389 YLPNKFKKFVVHNVSELELLMMHNR 413


>09_04_0632 - 19121654-19121783,19121910-19122091,19122752-19122841
          Length = 133

 Score =  100 bits (240), Expect = 5e-22
 Identities = 49/67 (73%), Positives = 54/67 (80%)
 Frame = +3

Query: 246 YAPNGFRKVLVHNVKELEILMMXNRXYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 425
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN  AR
Sbjct: 67  YLPNKFKKFVVHNVSELELLMMHNRMYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 126

Query: 426 LRSQENE 446
           LRSQE+E
Sbjct: 127 LRSQEDE 133



 Score = 97.1 bits (231), Expect = 7e-21
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           MA+ P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNIGYG
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYG 59

Query: 226 SNKKTRHMLP 255
           S+KKTRH LP
Sbjct: 60  SDKKTRHYLP 69


>08_02_1315 +
           26083856-26083945,26084093-26084226,26084753-26084819,
           26085011-26085192,26085315-26085444
          Length = 200

 Score =  100 bits (240), Expect = 5e-22
 Identities = 49/67 (73%), Positives = 54/67 (80%)
 Frame = +3

Query: 246 YAPNGFRKVLVHNVKELEILMMXNRXYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 425
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I VTN  AR
Sbjct: 134 YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVVTNKLAR 193

Query: 426 LRSQENE 446
           LRSQE+E
Sbjct: 194 LRSQEDE 200



 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 29/38 (76%), Positives = 35/38 (92%)
 Frame = +1

Query: 142 NWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 255
           +WR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LP
Sbjct: 99  SWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLP 136



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 138
           MA+ P+    IVKKR K+F R  SDRY  LK
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYLCLK 30


>09_04_0633 -
           19123930-19124009,19124240-19124344,19124453-19124543,
           19124647-19124709,19126318-19126368,19126878-19126962,
           19127102-19127283,19128493-19128582
          Length = 248

 Score = 97.1 bits (231), Expect = 7e-21
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = +1

Query: 46  MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 225
           MA+ P+    IVKKR K+F R  SDRY  LK +WR+P+GID+RVRR+FKG  LMPNIGYG
Sbjct: 1   MAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYG 59

Query: 226 SNKKTRHMLP 255
           S+KKTRH LP
Sbjct: 60  SDKKTRHYLP 69



 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = +3

Query: 246 YAPNGFRKVLVHNVKELEILMMXNRXYCAEIAHGVSSKKRKLIVERAQQLSIRVT 410
           Y PN F+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL I ++
Sbjct: 67  YLPNKFKKFVVHNVSELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDIVIS 121


>03_05_0802 -
           27823213-27823701,27823911-27823959,27824053-27824120,
           27824208-27824276,27824391-27824460,27824556-27824635,
           27824706-27824784,27824949-27825025,27825110-27825176,
           27825285-27825381,27825478-27825574,27825701-27825739,
           27825843-27825907,27826034-27826142,27826275-27826487
          Length = 555

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 332 RDRSWCLFEEAEADRGKSPAAQHQSDECGRSPP 430
           + R++ LF+E   D  KSP AQ  S     SPP
Sbjct: 472 KKRAFRLFQEDSLDIRKSPEAQMNSPSSVLSPP 504


>03_05_0796 + 27787401-27788831
          Length = 476

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 359 EAEADRGKSPAAQHQSDECGR 421
           + ++D GK    QH+ DECG+
Sbjct: 393 DGDSDVGKMKIVQHKCDECGK 413


>03_05_0398 +
           23790257-23790323,23791116-23791339,23792208-23792275,
           23794738-23794980,23795108-23795237,23797235-23797954
          Length = 483

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 282 CELGPYGIHWEHMTGLLVGTVT 217
           C LG +  HW+H T L+   +T
Sbjct: 79  CILGYFAFHWDHATALISQALT 100


>03_01_0438 +
           3399203-3399297,3399389-3399480,3399638-3399750,
           3400345-3400610,3400793-3400864,3401023-3401098,
           3401241-3401339,3401432-3401586,3401679-3401783,
           3401880-3401966,3402459-3402543,3402626-3402734,
           3403468-3403544,3403635-3403715,3404137-3404328,
           3404415-3404528,3404650-3404742,3404864-3404990,
           3405075-3405151,3405455-3405502,3405588-3405657,
           3405737-3405810,3405895-3406005,3406222-3406300,
           3406936-3408320
          Length = 1293

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -2

Query: 454 YIYSFSWERRRAAAFVTLMLSCWALSTISFRFFEE 350
           Y+++   ER  A + +TLM++C++L  +    F +
Sbjct: 177 YLFNSQLERNIALSIITLMITCFSLVVVGGFLFHK 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,591,540
Number of Sequences: 37544
Number of extensions: 247161
Number of successful extensions: 801
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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