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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0025
         (658 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0141 + 15036249-15036339,15036834-15037768,15037968-15038081     31   1.1  
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816...    30   1.4  
02_04_0512 + 23565210-23566058,23566824-23568224                       29   2.5  
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485...    29   3.3  
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141...    29   3.3  
06_01_0237 - 1808203-1809159,1809246-1809399,1809488-1809636,180...    29   4.3  
03_01_0609 - 4474434-4475783                                           29   4.3  
03_01_0351 - 2758646-2759518                                           28   5.7  
09_03_0174 - 13097138-13098265                                         28   7.5  
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773...    28   7.5  
06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053           28   7.5  
06_01_0313 - 2250312-2250516,2250585-2250610,2250792-2251076,225...    28   7.5  
04_03_0620 - 18088287-18088495,18089174-18089210,18089315-180893...    28   7.5  
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602...    28   7.5  
03_01_0026 + 246682-246866,247791-247915,248452-248625,249377-24...    28   7.5  
09_06_0079 - 20732041-20732097,20732219-20732301,20732661-207328...    27   9.9  
02_04_0138 - 20144653-20144685,20144992-20145081,20145405-201454...    27   9.9  

>09_04_0141 + 15036249-15036339,15036834-15037768,15037968-15038081
          Length = 379

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 367 SRSSDVTDASSVGC*FYCTLCRDCIRRVEDSSSRHCT 257
           SR +  T +SS    FYCT+C + +  +E  +   CT
Sbjct: 169 SRGAAATASSSASSEFYCTICMETVDAIERFAIPGCT 205


>04_03_0092 +
           11079185-11079589,11081319-11081409,11081507-11081612,
           11081694-11081976,11082062-11082210,11083582-11083735,
           11083837-11084793
          Length = 714

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 144 IRMGAISQSNINLAGSHCGVSIGEDGPSQMGLEDL 248
           IR+ A+  S +    +H  + +GEDGP+   +E L
Sbjct: 497 IRLSALCGSRVIFVMTHDSIGLGEDGPTHQPVEQL 531


>02_04_0512 + 23565210-23566058,23566824-23568224
          Length = 749

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 134 SSCEESSKCGDKHHGPVPAGCSRSHSN 54
           SSC  + KC   HHG    G + +H +
Sbjct: 500 SSCSSNGKCDHAHHGDAKCGNAENHGS 526


>07_01_0646 +
           4853546-4853623,4853732-4855357,4855467-4855751,
           4856131-4856277
          Length = 711

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 22/87 (25%), Positives = 34/87 (39%)
 Frame = +3

Query: 9   YPERYVECFIAEQNLVGVATGAACRDXXXXXXXXXXXXXXXXXDQIRMGAISQSNINLAG 188
           +PER  +  IAEQ+ V  A G A                      +    + +  +  A 
Sbjct: 431 FPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAM 490

Query: 189 SHCGVSIGEDGPSQMGLEDLAMSVQCL 269
              G+ +G DGP+  G  D+A  + CL
Sbjct: 491 DRAGL-VGADGPTHCGAFDVAY-MACL 515


>05_04_0284 -
           19813179-19813340,19813464-19813748,19813850-19814131,
           19814224-19814531,19814654-19814927,19815807-19816175,
           19816372-19816434,19817495-19817789,19817818-19818008,
           19818123-19818428,19818516-19818638
          Length = 885

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 21/87 (24%), Positives = 33/87 (37%)
 Frame = +3

Query: 9   YPERYVECFIAEQNLVGVATGAACRDXXXXXXXXXXXXXXXXXDQIRMGAISQSNINLAG 188
           +P R  +  IAEQ+ V  A G AC                     +    + +  +  A 
Sbjct: 600 FPNRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM 659

Query: 189 SHCGVSIGEDGPSQMGLEDLAMSVQCL 269
              G+ +G DGP+  G  D+   + CL
Sbjct: 660 DRAGL-VGADGPTHCGAFDVTY-MACL 684


>06_01_0237 -
           1808203-1809159,1809246-1809399,1809488-1809636,
           1809715-1809997,1810087-1810192,1810293-1810383,
           1810779-1811270
          Length = 743

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 144 IRMGAISQSNINLAGSHCGVSIGEDGPSQMGLEDL 248
           +R+ A+ ++ +    +H  + +GEDGP+   +E L
Sbjct: 526 MRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHL 560


>03_01_0609 - 4474434-4475783
          Length = 449

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 468 PESRCTKHLLLLKNEKRRCGGSCVGPV--HHQAIGRGCSS 581
           PE      LL +K  + RCGG  VG +  HH A G   S+
Sbjct: 117 PEDNVGAALLQVKLVRYRCGGLVVGSICHHHTADGHSMSA 156


>03_01_0351 - 2758646-2759518
          Length = 290

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 363 LDPTRLSCTPMMKYSRSDRPKYSVSPQRTECC*SE 467
           LDP  ++  P++KY R+   K S SPQ    C SE
Sbjct: 85  LDPDVVAALPVVKYRRAASGK-SASPQECAVCLSE 118


>09_03_0174 - 13097138-13098265
          Length = 375

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 333 TLEASVTSELLDPTRLSC-TPMMKYSRSDRPKYSV 434
           TL+AS+T+  +    L C TP M+Y  ++RP YS+
Sbjct: 336 TLDASITN--IWSYELGCGTPTMEYWGTERPDYSI 368


>08_02_1237 +
           25475219-25475916,25476127-25476320,25476407-25477302,
           25477416-25477490,25477582-25477689,25477780-25477897,
           25478007-25478142,25478228-25478372,25478460-25479080,
           25479166-25479597
          Length = 1140

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -2

Query: 279 TVAVGTVRTWQGPPVP--SDSDRPL 211
           TV V T R W+ PP+    DS+RP+
Sbjct: 540 TVEVSTSRAWRAPPLELFKDSERPI 564


>06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053
          Length = 1613

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 430  PSVRKGPSVVDRSRNHAARSTCCC 501
            P  +KG  ++  +RN    +TCCC
Sbjct: 974  PDNKKGSRIIVTTRNEDVANTCCC 997


>06_01_0313 -
           2250312-2250516,2250585-2250610,2250792-2251076,
           2251289-2251567,2251817-2252121,2252581-2252860,
           2253209-2253475
          Length = 548

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/87 (21%), Positives = 36/87 (41%)
 Frame = +3

Query: 9   YPERYVECFIAEQNLVGVATGAACRDXXXXXXXXXXXXXXXXXDQIRMGAISQSNINLAG 188
           +P+R+ +  IAEQ+ V  + G AC                     +    + +  +  A 
Sbjct: 241 FPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAI 300

Query: 189 SHCGVSIGEDGPSQMGLEDLAMSVQCL 269
           +  G+ +G +GP+  G  D+   + CL
Sbjct: 301 TSAGL-VGSEGPTNSGPFDITF-MSCL 325


>04_03_0620 -
           18088287-18088495,18089174-18089210,18089315-18089395,
           18089771-18089838,18093361-18094219
          Length = 417

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 463 DQQHSVLCGLT--EYFGLSDLEYFIIGVQDSRVG 368
           D  H  +CG T  EY G  DLEY    V D+ VG
Sbjct: 324 DDSHKNICGETIKEYIGDRDLEYNTNDVIDAVVG 357


>03_05_0136 +
           21158917-21159939,21160183-21160241,21160259-21160294,
           21160345-21160387,21160582-21160698,21162090-21162179,
           21162329-21162436,21162547-21162588
          Length = 505

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -2

Query: 471 PAPINNTRSFAD*RSTLACPTLNTSSLGYKIAVLGLEVLM*QMPRVLAANSTARSVETAS 292
           PAP  +T S +   +T     L   SL    A L  +    ++PR   A++ AR V  A 
Sbjct: 81  PAPAASTPSSSSSVATTLADHLAEDSLDAPPAALSRQRSCTELPRFADADAEARKVVVAR 140

Query: 291 DG*KTVAVG 265
            G    A+G
Sbjct: 141 SGGHASAIG 149


>03_01_0026 +
           246682-246866,247791-247915,248452-248625,249377-249467,
           249516-250554
          Length = 537

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 55  LEWLREQPAGTGPWCLSPHLLLSSQE 132
           L+W +  PA   PW   P L++S +E
Sbjct: 412 LKWQKLYPANKYPWIPKPQLIISQEE 437


>09_06_0079 -
           20732041-20732097,20732219-20732301,20732661-20732834,
           20732927-20733059,20733226-20733310,20733527-20733650,
           20733835-20733904,20734643-20734669,20734788-20734949
          Length = 304

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 468 PESRCTKHLLLLKNEKRRCGGSCVGPVHHQAIGRGCS 578
           P S  + HL  L  + RR G +   P H Q +  GCS
Sbjct: 4   PSSLASSHLSRLA-DLRRAGVAAAAPAHPQQLRLGCS 39


>02_04_0138 -
           20144653-20144685,20144992-20145081,20145405-20145489,
           20146859-20146922,20149388-20149628
          Length = 170

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 397 IIGVQDSRVGSRSSDVTDASSVGC*FYCTLCRDCIRRVED--SSSRHCT 257
           +  + D  V    + + D S   C +     + C++R+ED  +  +HCT
Sbjct: 99  VASMSDEEVSDPKALLEDRSKAKCVYQWYEYQKCVKRIEDDETGQKHCT 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,472,881
Number of Sequences: 37544
Number of extensions: 381854
Number of successful extensions: 1132
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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