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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0007
         (585 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073...    49   2e-06
08_02_0907 - 22485714-22486859,22487836-22487882,22488456-224888...    32   0.39 
02_01_0161 - 1123890-1124210,1124599-1124673,1124841-1124903,112...    29   2.1  
02_01_0107 + 785993-786359,786773-787703,787807-787975,788472-78...    29   3.6  
09_06_0348 + 22452219-22452360,22452791-22452912,22453342-224534...    28   6.3  
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221...    28   6.3  
02_02_0340 + 9135846-9138377                                           28   6.3  
01_06_0159 + 27089006-27089064,27089925-27090007,27090414-270905...    28   6.3  
12_02_0223 + 15868889-15869182                                         27   8.3  
11_01_0222 + 1740828-1740830,1741109-1741218,1741304-1741487,174...    27   8.3  
03_02_0849 - 11768191-11771412                                         27   8.3  
02_01_0758 + 5623953-5624171,5624251-5624430,5624533-5624591,562...    27   8.3  

>07_03_1343 -
           25905475-25905678,25907025-25907167,25907273-25907366,
           25907526-25907687,25907884-25907952,25908631-25908843,
           25909054-25909113,25909294-25909382,25909745-25910063
          Length = 450

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = +2

Query: 257 YVHYVGYDRRLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDK-SGRKITRNQKRKHDE 433
           YVHY  ++RRLDEWV        + +  +      + D  + DK +  K+TR+QKRK DE
Sbjct: 101 YVHYTEFNRRLDEWV--------KLEQLDLETVETDVDEKVEDKATSLKMTRHQKRKIDE 152

Query: 434 INHVQKTYAEMDPTTAALEKXHEAILKLNT*TGIQI 541
             HV++ + E+D   AA  + HE   K+     I++
Sbjct: 153 -THVEQGHEELD---AASLREHEEFTKVKNIAKIEL 184



 Score = 33.9 bits (74), Expect = 0.096
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +1

Query: 505 YSKVKYIDRDTNLENMEIDTWYFSPYP 585
           ++KVK I +   L   EIDTWYFSP+P
Sbjct: 173 FTKVKNIAK-IELGRYEIDTWYFSPFP 198



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 150 PLDIGEHYLVRRSDESWHPAEIIQSRYSTAES 245
           PL++G   + R  D+  HP ++I+ R S+  S
Sbjct: 62  PLEVGTRVMCRWRDQKLHPVKVIERRKSSTSS 93


>08_02_0907 -
           22485714-22486859,22487836-22487882,22488456-22488830,
           22489339-22489500,22490325-22490439
          Length = 614

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 151 GCSGTDSESSLSVLRHSGLGNSLFTIGFSNSLSPFAIIMPT-TTMVSRN 8
           G S + +   + V +    GN    I FSN+ SP A+  PT  TM+S N
Sbjct: 291 GGSSSAAPLQIPVFQQQSTGNGNTVISFSNNASPMAMRAPTDNTMISFN 339


>02_01_0161 -
           1123890-1124210,1124599-1124673,1124841-1124903,
           1125020-1125358
          Length = 265

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/65 (23%), Positives = 29/65 (44%)
 Frame = +3

Query: 3   AVLRDTIVVVGIIMAKGDKELEKPIVNNELPNPECRSTDNEDSESVPEQPLDIGEHYLVR 182
           A+LRD   +  ++ A+  +   + +   E+P+  CR       E  P  P D+G  +   
Sbjct: 21  AILRD---LADLVRARHRRRRRRRVQREEIPSWGCRRPRTTPGEKKPAPPADVGRRHEAA 77

Query: 183 RSDES 197
            S ++
Sbjct: 78  ASPDT 82


>02_01_0107 +
           785993-786359,786773-787703,787807-787975,788472-788588,
           788815-788961
          Length = 576

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 69  KPIVNNELPNPECRS-TDNEDSESVPEQPLDIGEHYLVRRSDESWHPA 209
           K + N+E+PN E  S +D +  E       D+G  +    ++E W PA
Sbjct: 214 KDLENHEIPNSETNSISDKQGDEEHQPAKKDVGIAWEDDENNEGWLPA 261


>09_06_0348 +
           22452219-22452360,22452791-22452912,22453342-22453436,
           22453691-22453844,22453952-22454014,22454329-22454478,
           22454650-22454982,22455086-22455820
          Length = 597

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 114 TDNEDSESVPEQPLDIGEHYLVRRSDESWHPAEIIQSRYSTAESCYEIM 260
           T+ +D ES+    L+  E      S E+ H  + IQS  ST E   E+M
Sbjct: 194 TETKDEESIETGELNSYEEEGEHSSGETAHRTDEIQSFRSTTERAEELM 242


>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
            17722189-17722332,17722415-17722722,17723433-17723568,
            17723748-17723841,17723976-17724073,17724951-17725004,
            17725704-17726150,17726227-17726393,17726540-17726663,
            17726751-17726837,17727000-17727056,17727492-17727560,
            17727664-17727811,17727893-17728116,17728842-17728958,
            17729649-17729742,17730573-17730640,17733278-17733334,
            17733412-17733511,17733638-17733674,17734077-17734200,
            17735254-17735322,17735371-17735410,17735905-17735993,
            17736849-17736953,17737033-17737104,17737814-17737936,
            17738049-17738117,17738966-17739059,17739145-17739231,
            17740184-17740351,17740436-17740552,17741484-17741590,
            17741671-17741803,17742564-17742667,17743504-17743629,
            17744148-17744216,17744996-17745064,17745278-17745358,
            17745444-17745533,17745896-17746000,17747803-17747873,
            17748320-17748461,17749266-17749330,17750081-17750168,
            17750236-17750325,17750437-17750673,17751064-17751170,
            17751625-17751832,17752376-17752546
          Length = 2366

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +3

Query: 141  PEQPLDIGEHYLVRRSDESWHPAEIIQSRYSTAESCYEIMSIMSDMIEDSTNGC 302
            P+   ++ E   V     SW+ A I+QSR  +++ C     I    +   T  C
Sbjct: 1696 PDNFFEVEEFVFVALEFYSWYLATILQSRCGSSQECLSNSLISELSVATETMAC 1749


>02_02_0340 + 9135846-9138377
          Length = 843

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 408 LVIFRPDLSVSRWSQFMLLFD-CSHTSNLSDITRWRDTHSSSLLSYPT*WT*FRNKI 241
           L   R D+S    S    ++D CSH SNL  IT+  +    SL   PT  T  +NK+
Sbjct: 163 LTFNRVDMSKKIKSVIEGIYDLCSHVSNLLKITQPEERRVLSLKRPPTSSTITQNKL 219


>01_06_0159 +
           27089006-27089064,27089925-27090007,27090414-27090588,
           27091442-27091592,27091629-27091752,27092378-27092446,
           27093197-27093291
          Length = 251

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 260 VHYVGYDR-RLDEWVSRHRVMSDRFDVCEQSNNNINCDHLLTDKS 391
           +H VG++  ++D W    R ++D   +     NN+N + LL+ K+
Sbjct: 203 LHLVGWNNVKIDVWTHSVRGLTDNDFILAAKINNLNLEGLLSKKA 247


>12_02_0223 + 15868889-15869182
          Length = 97

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 223 DCIISAGCHDSSDRRTK*CSPMSKGCSGTDSESSLSVLRHSGL 95
           D I +A C +S D   K C+P   GCS    +S L  L+   L
Sbjct: 44  DDICNASCVNS-DTIAKLCAPQCDGCSPEACQSCLQALKQECL 85


>11_01_0222 +
           1740828-1740830,1741109-1741218,1741304-1741487,
           1742159-1742344,1742631-1742849,1742958-1743171,
           1743549-1743601,1743839-1743874
          Length = 334

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 296 WVSRHRVMSDRFDVCEQSNNNINCDHLLTDKSGRKITRNQKRKHDEINHVQKTYAE 463
           W++R R +    +  E++NN  N D     KS +K    Q  + DE+  +Q+ YA+
Sbjct: 189 WMNRKRTVLAG-EHKEENNNTANLDQSSEAKSDKK----QLSEEDEMKSIQEAYAK 239


>03_02_0849 - 11768191-11771412
          Length = 1073

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 457 VSFLHMVYFVMFTFLIPCYFPAG--FVREQVVAVYVIVRLL 341
           +S+ H+ Y +   F + C FP G  F +++V+ +++   L+
Sbjct: 418 ISYHHLPYHLKQLFTLCCLFPVGHEFEKDEVIRLWIAEGLI 458


>02_01_0758 +
           5623953-5624171,5624251-5624430,5624533-5624591,
           5625243-5625390,5625476-5625547,5625636-5625746,
           5626615-5626882,5627222-5627265,5627393-5627477,
           5627554-5627600
          Length = 410

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 51  GDKELEKPIVNNELPNPECRSTDNEDSESVPEQPLDIGEHYLVRRSDES 197
           GD  +++     + P    + T  EDS+   +    +G++  V++ DES
Sbjct: 126 GDSSVDRNKAEKQEPRSSTKETSLEDSKEKRKTQKPLGQNSSVKKDDES 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,374
Number of Sequences: 37544
Number of extensions: 321612
Number of successful extensions: 946
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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