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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a16
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725...   104   7e-23
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847...    38   0.005
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209...    36   0.021
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527...    36   0.028
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135...    31   0.80 
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831...    29   2.4  
05_07_0290 + 29016410-29018920                                         29   3.2  
10_08_0898 + 21424379-21424792,21424974-21425723                       29   4.2  
01_02_0074 + 10869546-10871373,10871449-10872077                       29   4.2  
12_02_1275 - 27482784-27483272                                         28   5.6  
12_02_1215 + 27070164-27070302,27070308-27071098                       28   5.6  
12_02_0981 - 25027336-25027596,25028017-25028361,25028681-250288...    28   5.6  
06_01_0837 - 6355315-6355342,6356185-6356361,6356579-6356662,635...    28   5.6  
05_04_0233 + 19265553-19265703,19265805-19265826,19266788-192669...    28   5.6  
03_05_0358 - 23438416-23439282,23440116-23440163,23440343-234403...    28   5.6  
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73...    28   7.4  
09_04_0350 + 16899076-16900164                                         28   7.4  
08_01_0810 - 7857946-7858422                                           28   7.4  
04_01_0113 + 1188285-1188420,1189245-1189795                           28   7.4  
02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777     28   7.4  
12_02_1056 - 25728449-25728682,25728964-25729017                       27   9.8  
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871     27   9.8  
03_05_0573 - 25737373-25737774                                         27   9.8  
03_03_0253 + 15871870-15871949,15872101-15872170,15872666-158727...    27   9.8  

>09_04_0728 -
           19771975-19772093,19772131-19772224,19772322-19772507,
           19772596-19772767,19772854-19772983,19773060-19773136,
           19774109-19774194,19774508-19774585,19775916-19776045,
           19776379-19776423,19776508-19776618,19776801-19777057,
           19777153-19777302,19777899-19778008,19778426-19778546
          Length = 621

 Score =  104 bits (249), Expect = 7e-23
 Identities = 44/121 (36%), Positives = 73/121 (60%)
 Frame = +3

Query: 219 TAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDY 398
           T  +  P  T +++I +K+  G ++A DT  SYGS  R++   R+  V    L+G  G++
Sbjct: 359 TQRTQYPYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEF 418

Query: 399 ADFQYLKDIIQQKIIDERCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQD 578
           +DFQ +   + +  + +    DG  L P+ +H +LTRV+YN+R+K DPLWNS V+ G++ 
Sbjct: 419 SDFQEILRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKK 478

Query: 579 G 581
           G
Sbjct: 479 G 479


>02_05_0884 -
           32483735-32483866,32484417-32484491,32484707-32484780,
           32485180-32485291,32485476-32485548,32485674-32485729,
           32486046-32486122,32486799-32486940
          Length = 246

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +3

Query: 252 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 431
           TT++GV +D G V+A D+  S G     R   ++ ++ D + +   G  AD Q + D ++
Sbjct: 26  TTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYVR 85


>06_01_0285 -
           2090427-2090558,2091045-2091119,2091334-2091407,
           2091792-2091903,2092036-2092108,2092291-2092346,
           2092679-2092755,2093384-2093525
          Length = 246

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +3

Query: 252 TTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQ 431
           TT++GV +D G V+A D+  S G     R   ++ ++ D + +   G  AD Q + + ++
Sbjct: 26  TTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYVR 85


>05_01_0588 +
           5278013-5278153,5278641-5278782,5278923-5279019,
           5279130-5279199,5279284-5279388,5279531-5279629,
           5280062-5280152,5280238-5280311
          Length = 272

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 240 ITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLK 419
           + T TT++G+ F  G V+  DT  + G +   ++C ++  +   I     G  AD + + 
Sbjct: 35  LKTGTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVT 94

Query: 420 DIIQQKI 440
           D++  ++
Sbjct: 95  DMVSSQL 101


>03_02_0750 +
           10909130-10909616,10912257-10912916,10913139-10913544,
           10914376-10914757,10914918-10915679,10916106-10916165,
           10916695-10917105
          Length = 1055

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 594 RERVHHPEY-RQPHSCSRGDPSCSSCCRGHESTSSAENG 481
           R  ++HP Y R+P SCS G   C  CCR      +   G
Sbjct: 208 RALLNHPNYARRPRSCS-GCVMCGGCCRRRGGAGAGGGG 245


>06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,
            8313443-8313523,8313706-8313779,8313865-8313919,
            8314031-8314079,8314222-8314359,8314455-8314536,
            8315131-8315209,8315357-8315400,8315479-8315673,
            8316110-8316185,8317427-8317507,8317623-8317703,
            8318128-8318204,8318402-8318499,8318672-8318809,
            8319397-8319478,8319564-8319642,8319885-8319931,
            8320014-8320228,8320330-8320450,8320529-8320648,
            8320731-8320849,8320964-8321036,8321112-8321231,
            8321538-8321606,8321756-8321926,8322004-8322051,
            8322192-8322333,8323244-8323341,8323684-8323828,
            8323928-8324013,8324112-8324222,8324456-8324530,
            8324836-8324901,8325036-8325224,8325315-8325425,
            8326616-8326696,8327192-8327371
          Length = 1385

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +3

Query: 99   MGDTMNPTPLWQNGPS---PGAFY-NFPGNASTIAPSRHGVQDFTAHSAS 236
            MG  +   PLWQ GP    PG  Y  FPGN    +     VQ++   S S
Sbjct: 1059 MGQALAGVPLWQLGPESRHPGVPYIVFPGNVGDNSALAKVVQNWACPSRS 1108


>05_07_0290 + 29016410-29018920
          Length = 836

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
 Frame = +3

Query: 345 PRVMKVNDLILLGC-GGDYADFQYL-----KDIIQQKIID-----ERCVGDGLQLKPRSL 491
           P V+    LI   C  G+Y D  Y      KD +Q  ++        C G  LQ K + L
Sbjct: 426 PNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKEL 485

Query: 492 HCWLTRVLYN 521
           HC+  R  Y+
Sbjct: 486 HCFALRRAYD 495


>10_08_0898 + 21424379-21424792,21424974-21425723
          Length = 387

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +3

Query: 93  AFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHG 206
           A MGD M    L     +PGA   FP +A+  A   HG
Sbjct: 62  AAMGDAMRVDDLLDLSNTPGAHDFFPASAAAAAAGDHG 99


>01_02_0074 + 10869546-10871373,10871449-10872077
          Length = 818

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 147 PGAFYNFPGNASTIAPSRHGVQ--DFTAHSASPITTTTTVIG 266
           PG  Y F G A  + P  HG+   +FT  SA+     T  +G
Sbjct: 642 PGRTYKFYGGADVLYPFGHGLSYTNFTYASATAAAPVTVKVG 683


>12_02_1275 - 27482784-27483272
          Length = 162

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 320 PVRAQCVTGDNTSLVKLNSDDSCGGRDGAR 231
           P R + V G  T L + ++ D  GGR GAR
Sbjct: 61  PARYRLVEGSETGLAQRSAADDSGGRLGAR 90


>12_02_1215 + 27070164-27070302,27070308-27071098
          Length = 309

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 320 PVRAQCVTGDNTSLVKLNSDDSCGGRDGAR 231
           P R + V G  T L + ++ D  GGR GAR
Sbjct: 224 PARHRLVEGSETGLAQRSAADDSGGRLGAR 253


>12_02_0981 -
           25027336-25027596,25028017-25028361,25028681-25028827,
           25028906-25029970
          Length = 605

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +3

Query: 396 YADFQYLKDIIQQKIIDERCVGD----GLQLKPRSLHCWLTRVLY 518
           +AD++ L D    +++D   V D    G    PR LH W  R LY
Sbjct: 42  HADWRGLPDAAVSRVLDRLPVVDLFRLGYLFSPRWLHIWRARPLY 86


>06_01_0837 -
           6355315-6355342,6356185-6356361,6356579-6356662,
           6356989-6357542,6358086-6358322
          Length = 359

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 348 RVMKVNDLILLGCGGDYADFQYLKDIIQQKI 440
           RVM V+DL+LLG    YAD ++ ++ +  K+
Sbjct: 48  RVMMVSDLMLLGSDATYAD-RFFRNHVMSKL 77


>05_04_0233 +
           19265553-19265703,19265805-19265826,19266788-19266914,
           19267814-19267904,19268008-19268097,19268194-19268294,
           19268945-19269081,19271315-19271511,19271600-19271621,
           19272343-19272466,19273158-19273248,19273378-19273467,
           19273562-19273662,19278576-19278716
          Length = 494

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 614 PNLSTAPEKGFTILNTGNHIAVPEGIHLAPLVVEDTSQP 498
           PNL    +K   + ++G  + VP+ +H  PLV E T +P
Sbjct: 55  PNLRKIADK---VASSGYFVVVPDFLHGDPLVPESTEKP 90


>03_05_0358 -
           23438416-23439282,23440116-23440163,23440343-23440382,
           23440459-23440610
          Length = 368

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 314 RAQCVTGDNTSLVKLNSDDSCGGRDGAR 231
           R + V G  TSL +  + DS GGR GAR
Sbjct: 208 RHRLVEGSETSLAQRGTADSSGGRLGAR 235


>11_01_0101 -
           738305-738556,738723-738977,739306-739554,739649-739843,
           739953-740060,740184-740405,740806-741390,741495-741863,
           742423-742529,742755-742883,743027-743084,743166-743248,
           744115-744196,744274-744350,744477-744560,744649-744718,
           744796-744884,744965-745654,746127-746439
          Length = 1338

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 649 ARSRSQHLHRLFPIYQQLPRKGSPS*IP 566
           AR R +HL R    YQQL R+  P  +P
Sbjct: 790 ARERMEHLRRQEREYQQLVRRAKPCVLP 817


>09_04_0350 + 16899076-16900164
          Length = 362

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 320 PVRAQCVTGDNTSLVKLNSDDSCGGRDGAR 231
           P R + V G  T L +  + D  GGR GAR
Sbjct: 299 PTRHRLVEGSETGLAQRGAADGSGGRLGAR 328


>08_01_0810 - 7857946-7858422
          Length = 158

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 244 RPPQLSSELSLTRDVLSPVTHWARTGHWP 330
           +PP +S ++ + + +L  +  W R G WP
Sbjct: 31  KPPVVSKKVPMPQVLLDYILSWTRMGPWP 59


>04_01_0113 + 1188285-1188420,1189245-1189795
          Length = 228

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 641 EITASS*AVPNLSTAPEKGFTILNTGNHIAVPEGIHLAPLVVEDTSQPAV 492
           ++   S A+PNL T      T+ N G   AV +    AP  VE   +P V
Sbjct: 120 DLNLPSIAIPNLRTFQAMTRTVTNVGQVNAVYKAFFQAPAGVEMAVEPPV 169


>02_03_0145 - 15715181-15715834,15716049-15716271,15717318-15718777
          Length = 778

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
 Frame = -1

Query: 603 NSSRERVHHPEYRQPHSCSRGDPSC-------SSCCRGHESTSSAENGA*AGDH 463
           +SS      P    P +CS G+PSC        +C R H + ++    A A  H
Sbjct: 48  SSSSSSSSSPSDPPPFACSGGEPSCCAHGLLRRACVRAHPAVAACAPAAAAASH 101


>12_02_1056 - 25728449-25728682,25728964-25729017
          Length = 95

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 320 PVRAQCVTGDNTSLVKLNSDDSCGGRDGAR 231
           P R + V G  T L + ++ D  GGR GAR
Sbjct: 37  PARHRLVEGSETGLAQRSAADGNGGRLGAR 66


>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
          Length = 212

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 258 VIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQK 437
           VIGV      V+A DT      L    D  +VM ++   L+G  G+  D     + IQ+ 
Sbjct: 4   VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKN 63

Query: 438 I 440
           +
Sbjct: 64  L 64


>03_05_0573 - 25737373-25737774
          Length = 133

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 615 SQFINSSRERVHHPEYRQPHSCSRGDP 535
           + F  S   R HHP +  PH   R DP
Sbjct: 34  TSFPRSLASRAHHPLFACPHRLQRRDP 60


>03_03_0253 +
           15871870-15871949,15872101-15872170,15872666-15872701,
           15873576-15873630,15873859-15873941,15874019-15874850,
           15875184-15875286,15875359-15875498,15875649-15875880,
           15876203-15876338,15877208-15877302,15877381-15877504,
           15877690-15877812
          Length = 702

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 126 LWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHS 230
           LW    S   FYN     ST  P  HG++DF +HS
Sbjct: 329 LWDPFYSRYYFYNILTQESTWYPP-HGLEDFASHS 362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,765,855
Number of Sequences: 37544
Number of extensions: 413165
Number of successful extensions: 1393
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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