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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120059.Seq
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496...   126   2e-29
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972...   123   2e-28
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31...   122   3e-28
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078     31   0.94 
04_03_1015 - 21734381-21736534                                         29   2.9  
10_07_0015 + 11813465-11813479,11814342-11814422,11814842-118149...    29   3.8  
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258     29   3.8  
12_02_0735 - 22636835-22639502,22639755-22640734                       29   5.0  
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076...    29   5.0  
12_02_0468 + 19418785-19418901,19418909-19419037,19422212-194222...    28   6.6  
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906...    28   6.6  
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510...    28   6.6  
06_01_0083 - 659510-661267,661577-662384,662700-663646                 28   6.6  
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191...    28   6.6  
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818     28   8.7  
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120...    28   8.7  
06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460...    28   8.7  
04_04_0040 + 22322839-22324173                                         28   8.7  

>05_04_0058 +
           17548945-17548947,17549234-17549281,17549618-17549695,
           17549952-17550132,17550223-17550320,17550827-17551258
          Length = 279

 Score =  126 bits (304), Expect = 2e-29
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = +3

Query: 255 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 434
           AGFMDVVSI KT E FRL+YD KGRF +H I  E+AK+KLCKV+ V  G K +P+L T+D
Sbjct: 100 AGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTND 159

Query: 435 GRTIRYPDPLIKVNDSIQLDIATTKL 512
           GRTIRYPDPLIK ND+I++D+ T K+
Sbjct: 160 GRTIRYPDPLIKANDTIKIDLETNKI 185



 Score =  107 bits (256), Expect = 1e-23
 Identities = 44/74 (59%), Positives = 60/74 (81%)
 Frame = +2

Query: 506 EIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATKLNNVFI 685
           +I+DFIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H++D+ GH FAT++ NVF 
Sbjct: 184 KIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVEDALGHQFATRMGNVFT 243

Query: 686 IGKGTKAYISLPRG 727
           IGK  K ++SLP+G
Sbjct: 244 IGKERKPWVSLPKG 257



 Score =  105 bits (253), Expect = 3e-23
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +2

Query: 11  ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
           ARG KKHLKRLNAP  WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT  E
Sbjct: 18  ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYRE 76



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 181 KRILKIVKQRLIKVDGKVRTDPTYP 255
           + ++ I+ QR + VDGKVRTD TYP
Sbjct: 75  REVISILMQRHVMVDGKVRTDKTYP 99


>01_03_0277 +
           14496298-14496300,14496875-14496952,14497061-14497241,
           14497348-14497445,14497542-14497979
          Length = 265

 Score =  123 bits (296), Expect = 2e-28
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +3

Query: 255 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 434
           AGFMDV+SI KT E +RL+YD KGRF +  +  E+AK+KLCKV+ V  G K +PYL T+D
Sbjct: 84  AGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYD 143

Query: 435 GRTIRYPDPLIKVNDSIQLDIATTKL 512
           GRTIRYPDPLIK ND+I++D+ T K+
Sbjct: 144 GRTIRYPDPLIKANDTIKIDLETNKI 169



 Score =  110 bits (264), Expect = 1e-24
 Identities = 45/74 (60%), Positives = 61/74 (82%)
 Frame = +2

Query: 506 EIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATKLNNVFI 685
           +I+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FAT+L NVF 
Sbjct: 168 KIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFT 227

Query: 686 IGKGTKAYISLPRG 727
           IGKG K ++SLP+G
Sbjct: 228 IGKGNKPWVSLPKG 241



 Score =  108 bits (260), Expect = 4e-24
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +2

Query: 8   MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
           MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT  E
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60



 Score = 35.5 bits (78), Expect = 0.044
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 181 KRILKIVKQRLIKVDGKVRTDPTYP 255
           + ++ I+ QR + VDGKVRTD TYP
Sbjct: 59  REVISILMQRHVLVDGKVRTDKTYP 83


>02_01_0047 -
           316960-317397,317647-317744,317837-318017,318122-318199,
           319023-319025
          Length = 265

 Score =  122 bits (294), Expect = 3e-28
 Identities = 52/86 (60%), Positives = 68/86 (79%)
 Frame = +3

Query: 255 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 434
           AGFMDV+SI KT E +RL+YD KGRF +  +  E+AK+KLCKV+ V  G K +PYL T+D
Sbjct: 84  AGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYD 143

Query: 435 GRTIRYPDPLIKVNDSIQLDIATTKL 512
           GRTIRYPDP+IK ND+I++D+ T K+
Sbjct: 144 GRTIRYPDPIIKANDTIKIDLETNKI 169



 Score =  109 bits (263), Expect = 2e-24
 Identities = 45/74 (60%), Positives = 61/74 (82%)
 Frame = +2

Query: 506 EIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATKLNNVFI 685
           +I+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H++D+ GH FAT+L NVF 
Sbjct: 168 KIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFT 227

Query: 686 IGKGTKAYISLPRG 727
           IGKG K ++SLP+G
Sbjct: 228 IGKGNKPWVSLPKG 241



 Score =  108 bits (260), Expect = 4e-24
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +2

Query: 8   MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
           MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT  E
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60



 Score = 35.5 bits (78), Expect = 0.044
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +1

Query: 181 KRILKIVKQRLIKVDGKVRTDPTYP 255
           + ++ I+ QR + VDGKVRTD TYP
Sbjct: 59  REVISILMQRHVLVDGKVRTDKTYP 83


>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
          Length = 574

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 152 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 51
           +G+SPG + RA  GD L V+VH       T++ W
Sbjct: 50  NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83


>04_03_1015 - 21734381-21736534
          Length = 717

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/42 (45%), Positives = 26/42 (61%)
 Frame = +1

Query: 364 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 489
           S+S V S+V+   LR+  T  R +AA   I THL+ ST PS+
Sbjct: 38  SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78


>10_07_0015 +
           11813465-11813479,11814342-11814422,11814842-11814951,
           11815553-11815608,11816086-11816180,11817021-11817126,
           11817261-11817577,11817666-11817848,11817976-11818173,
           11819029-11819346,11819721-11819813
          Length = 523

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 124 RVLAPGDFPEESSEVCFDRKRILKIVK 204
           +VL  G  P+ESSEV  D   ILK+++
Sbjct: 468 KVLDEGSSPQESSEVTCDENAILKVME 494


>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
          Length = 874

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 165 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 37
           F   L ++     +  L G   G+G Y PPSLSN   + AFKR
Sbjct: 35  FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76


>12_02_0735 - 22636835-22639502,22639755-22640734
          Length = 1215

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 696 PLPIMNTLFNFVAKVCPVESLMCTMSKEPGCL 601
           PL   NT+ + +A   PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456


>12_02_0513 -
           19906147-19906271,19906470-19906791,19907091-19907695,
           19908569-19908617
          Length = 366

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 124 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 11
           ++ V  G R+RC+H A   V+ P FG +    ++L ASR
Sbjct: 39  SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77


>12_02_0468 +
           19418785-19418901,19418909-19419037,19422212-19422249,
           19422377-19422650,19422740-19423072
          Length = 296

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = -3

Query: 616 GAGMSLAGHDGAHTPQVTASRDHTQVPRLKLDEVHNFVVAM----SNWMESLTLISGSG 452
           GAG    G DG         RDH ++ + ++D     + A      NWM+   ++ G G
Sbjct: 18  GAGEGGGGGDGNGEDDAVLPRDHLEITKARVDATDTALEAFPDMPGNWMDDFRVV-GDG 75


>08_02_1196 -
           25190040-25190065,25190224-25190302,25190554-25190646,
           25190761-25190892,25191578-25191721,25192941-25193150,
           25194915-25195406
          Length = 391

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 663 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRPPVIIHKFPD 532
           V KV PV+SL C   +   C+S +  +        PVI+  + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208


>07_03_1757 +
           29250163-29250349,29250612-29250813,29250898-29251008,
           29251112-29251160,29251247-29251353,29251439-29251942,
           29252486-29252614,29252865-29253161,29253274-29253720,
           29253828-29253893,29254109-29254169,29254314-29254463,
           29254555-29254689,29254791-29254818,29255430-29255479
          Length = 840

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -1

Query: 684 MNTLFNFVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 562
           +N +F     V     L+CT+    GC  +  +VP  P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253


>06_01_0083 - 659510-661267,661577-662384,662700-663646
          Length = 1170

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 696 PLPIMNTLFNFVAKVCPVESLMCTMSKEPGCL 601
           PL   NT+ + +A   PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445


>02_01_0285 -
           1913425-1914065,1914094-1914177,1914249-1915140,
           1915205-1915249,1915335-1915870,1915987-1916041
          Length = 750

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 300 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 404
           + LIYD++G   +  + P++A   L  ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181


>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
          Length = 557

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -3

Query: 598 AGHDGAHTPQVTASRDHTQVPR--LKLDEVHNFVVAMSNWMESLTLISGSG 452
           A HDG     V A R HT V R  LK+ +V    V  +N  ++  + +  G
Sbjct: 81  ANHDGETPLYVAAERGHTDVVREILKVSDVQTAGVKANNSFDAFHIAAKQG 131


>07_01_0172 -
           1201595-1201912,1202637-1202723,1202836-1202895,
           1203007-1203106,1203227-1203633,1204728-1204883,
           1204981-1205106,1205503-1205572,1205679-1205767
          Length = 470

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 659 RRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 564
           +RC+P S   A  +CR+SR  S+   W P+  S+
Sbjct: 423 QRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456


>06_03_0124 -
           16942492-16945032,16945478-16945572,16945966-16946076,
           16946142-16946229
          Length = 944

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +1

Query: 145 FPEESSEVCFDRKRILKIVKQRLIKVD--GKVRTDPTYPLDLWMLSQLRRLMNC 300
           FP +  ++C    ++++      + ++  G  R+ PTY + LWM+S    L+ C
Sbjct: 95  FPIQIMQMCGWLLKVVRWENLNCVHMEAHGNRRSSPTYLVMLWMISVASLLITC 148


>04_04_0040 + 22322839-22324173
          Length = 444

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +1

Query: 604 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAA 720
           TSRL  LR H  H   HG + RH++ +R   R  H    L A
Sbjct: 25  TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVA 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,732,388
Number of Sequences: 37544
Number of extensions: 516546
Number of successful extensions: 1610
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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