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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021023
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583...   128   3e-30
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917...    56   2e-08
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638...    44   1e-04
05_07_0048 + 27321906-27322190,27322897-27323441,27323552-273236...    33   0.24 
01_06_0898 - 32832665-32832724,32832761-32832815,32832957-328331...    31   0.74 
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780...    29   2.3  
01_06_1397 - 37017468-37017561,37017763-37017836,37019128-370191...    29   3.0  
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042     28   5.2  
02_04_0107 - 19804730-19805044                                         28   5.2  
01_01_0604 - 4493868-4494028,4494538-4494746,4495860-4496003,449...    28   5.2  
02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344...    28   6.9  
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353...    27   9.2  
09_06_0195 - 21477817-21478119,21478216-21478366,21478459-214786...    27   9.2  
05_05_0185 + 23064249-23064448,23064881-23064950,23065082-230651...    27   9.2  
01_06_0418 + 29210310-29210612,29211154-29211541,29211946-292121...    27   9.2  

>03_02_1035 -
           13557425-13557721,13557855-13558058,13558143-13558332,
           13558450-13558841,13558931-13559023,13559297-13559500,
           13559572-13559635,13559760-13559806,13559825-13559971,
           13560243-13560335,13560420-13560599,13560993-13561128,
           13561216-13561466,13561556-13561669,13561794-13561991,
           13562050-13562110,13562921-13563210
          Length = 986

 Score =  128 bits (310), Expect = 3e-30
 Identities = 60/81 (74%), Positives = 74/81 (91%)
 Frame = +1

Query: 259 MEMVSADTELVSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFV 438
           ME++++ T++V  L +K+APPLVTLLSAEPE+QYVALRNINL+VQKRP IL HE+KVFF 
Sbjct: 356 MELITS-TDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFC 414

Query: 439 KYNDPIYVKLEKLDIMIRLAS 501
           KYNDPIYVK+EKL+IMI+LAS
Sbjct: 415 KYNDPIYVKMEKLEIMIKLAS 435



 Score =  115 bits (277), Expect = 3e-26
 Identities = 55/84 (65%), Positives = 69/84 (82%)
 Frame = +2

Query: 2   AALSEINEASVSGRPLVEMNAPTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSI 181
           AAL+EI ++S   RP+ E+ + T++KLLTALNECTEWGQVFILD+LS Y   DAREA +I
Sbjct: 272 AALAEIQDSST--RPIFEITSHTLSKLLTALNECTEWGQVFILDSLSRYKAADAREAENI 329

Query: 182 CERITPRLAHANAAVVLSAVKVLM 253
            ER+TPRL HAN AVVLSAVK+++
Sbjct: 330 VERVTPRLQHANCAVVLSAVKIIL 353



 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +3

Query: 507 HIAQVLGELKEYATEVDVDFVRKAVRAIGRCAIKVEPSA 623
           +I QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E +A
Sbjct: 438 NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAA 476


>01_05_0762 +
           24990915-24990970,24991076-24991592,24991676-24991753,
           24993678-24993743,24994819-24994943,24995414-24995612,
           24995909-24996137,24996259-24996425,24996526-24996735,
           24997245-24997355,24997436-24997612,24997826-24998284,
           24998676-24998966
          Length = 894

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = +2

Query: 65  PTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSICERITPRLAHANAAVVLSAVK 244
           P +  LL  + E +EW Q  +L+ +SN+ P D  E   I   +  RL HAN AVVL+ +K
Sbjct: 273 PVVFYLLNRIKEFSEWAQCLVLELVSNFLPSDNNEIFDIMNLLEDRLQHANGAVVLATIK 332

Query: 245 VLM 253
           V +
Sbjct: 333 VFL 335



 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
 Frame = +1

Query: 259 MEMVSADTELVSTLSRKLAPPLVTLLSA-EPEVQYVALRNINLVVQKRPDILKHEMKVFF 435
           + +  + T++   +  ++  PL+TL+ A  PE  Y  L +++L+V + P +   + K F+
Sbjct: 335 LHLTMSMTDVHQQVYERIKAPLLTLVGAGSPEQSYSVLCHLHLLVMRAPMLFSSDYKSFY 394

Query: 436 VKYNDPIYVKLEKLDIMIRLASQA 507
            +++DP YVK  KL+++  +A+++
Sbjct: 395 CQFSDPSYVKKLKLEMLTAIANES 418



 Score = 34.3 bits (75), Expect = 0.080
 Identities = 14/35 (40%), Positives = 25/35 (71%)
 Frame = +3

Query: 504 SHIAQVLGELKEYATEVDVDFVRKAVRAIGRCAIK 608
           S+  +++ EL EYA  VDV   R+++RA+G+ A++
Sbjct: 418 SNTYEIVTELCEYAGNVDVPIARESIRAVGKIALQ 452


>01_07_0353 +
           42962769-42962972,42963062-42963138,42963571-42963817,
           42963907-42964476,42964998-42965171,42965514-42965640,
           42965719-42965828,42966707-42966907,42966999-42967966,
           42968110-42968358,42968760-42969105
          Length = 1090

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 42/76 (55%)
 Frame = +1

Query: 289 VSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFVKYNDPIYVKL 468
           V  L+R + P L TL S+ P+  YV L NI +  +  P +     + FF+  +DP   K 
Sbjct: 343 VDQLNRVVGPILFTLRSS-PDATYVMLGNILVFAKTAPQLFAPFYEDFFICTSDPYQTKA 401

Query: 469 EKLDIMIRLASQAT*P 516
            KL+I+  +A++++ P
Sbjct: 402 LKLEILTTIATESSIP 417


>05_07_0048 +
           27321906-27322190,27322897-27323441,27323552-27323638,
           27323878-27324116,27324909-27325114,27325227-27325310
          Length = 481

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 80  LLTALNECTEWGQVFILDALSNYSPRDAREAH--SICERITPRLAHANAAVVLSAVKVLM 253
           L +AL  C EW    IL  LS   P    E+   SIC R+   L   N     SAV ++M
Sbjct: 270 LPSALMLCFEWWSFEILVLLSGLLPNPELESSVLSICTRVANELGAGNPEGARSAVHLVM 329

Query: 254 S 256
           S
Sbjct: 330 S 330


>01_06_0898 -
           32832665-32832724,32832761-32832815,32832957-32833135,
           32833218-32833328,32833600-32833647,32833810-32833949,
           32834402-32834539,32834660-32834804,32834936-32835002,
           32835226-32835329,32835444-32835647
          Length = 416

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = +1

Query: 298 LSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMK 426
           LS  L PP  +  S+ P+  Y ALR + L+ +K P  L+H M+
Sbjct: 28  LSCVLQPPTPSSSSSRPDDDYAALRRL-LLRRKPPSALQHRME 69


>06_03_0237 +
           18576317-18576412,18577273-18577778,18577906-18578024,
           18578409-18578763,18578803-18578866,18578967-18579231,
           18579354-18579529
          Length = 526

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 59  NAPTINKLLTALNECTEWGQVFILDALSNYSPRDAREAHSICERITPRLAH 211
           NA  INKLL   NECT     F  DA  + + +D   A ++  R  P + H
Sbjct: 210 NANDINKLLEFFNECTLQNPKFYWDAQLDENDQDPAMAVAV-GRCFPGIIH 259


>01_06_1397 -
           37017468-37017561,37017763-37017836,37019128-37019193,
           37019543-37019623,37019735-37019943,37020096-37020192,
           37020497-37020514,37020597-37020727,37021040-37021088,
           37021450-37021539,37021616-37021721,37021815-37021885,
           37021963-37022037,37022059-37022120,37022677-37022887,
           37023599-37024069,37024387-37024719
          Length = 745

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 452 GSLYFTKNTFISCLSMSGRFCTTRLMFRS 366
           GSL  T + F++ L   GR C +R+ FRS
Sbjct: 510 GSLATTPSLFVTVLQEIGRLCESRVEFRS 538


>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
          Length = 819

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +1

Query: 379 NLVVQKRPDILKHEMKVFFVKYNDPIYV 462
           NLV++++ D  K+E+  F  ++N P+++
Sbjct: 127 NLVIRRKNDTSKYEVYAFEAQHNHPLFI 154


>02_04_0107 - 19804730-19805044
          Length = 104

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 497 LPKPHSPGARGTEGVCHRSGRGLRPEGRQGYRQMRHQGR 613
           L  P  P A  T  +C+R  +G   +GR+G+R+ R QGR
Sbjct: 22  LAPPLRPTAEATV-ICNRGRQGRHHQGRRGHRR-RCQGR 58


>01_01_0604 -
           4493868-4494028,4494538-4494746,4495860-4496003,
           4496298-4496539
          Length = 251

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 434 KNTFISCLSMSGRFCTTRLMFRSATYCTSGSALSSVTSGGASLRDSVL 291
           K T++      G+ CT   +  +   C S   L+   SGG S RD+V+
Sbjct: 181 KGTYVGLQKFGGKRCTPESV--ALALCQSEPVLNDGQSGGDSSRDNVI 226


>02_01_0478 -
           3442222-3442227,3442777-3442848,3442966-3443137,
           3443388-3443500,3443771-3443908,3444016-3444221,
           3444317-3444388,3444484-3444532,3444635-3444714,
           3444817-3445132,3445242-3445415,3445513-3446139,
           3446235-3446297,3446399-3446470,3446602-3446664,
           3446741-3446872,3447779-3447889,3449273-3449371,
           3450117-3450194
          Length = 880

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 262 EMVSADTELVSTLSRKLAPPLVTLLSAEPEVQYVALRNINLVVQKRPDILKHEMKVFFV 438
           E   A+ E  + LS   +PP   LLSA    Q+ +     +    +  I++HE+ +  V
Sbjct: 32  EETQAEAEAETPLSTIFSPPAENLLSAPGTAQFQSTCTFKISDYGKLKIIRHELSLMRV 90


>10_01_0323 +
           3530246-3530446,3531091-3531726,3531860-3532018,
           3532276-3532569,3557747-3557941,3558875-3559095,
           3559190-3559373,3559797-3559973,3561319-3561824,
           3561880-3562060
          Length = 917

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +2

Query: 59  NAPTINKLLTALNECTEWGQVFILDA 136
           NA  INKLL   NECT     F  DA
Sbjct: 892 NADDINKLLEFFNECTLQNTKFYWDA 917


>09_06_0195 -
           21477817-21478119,21478216-21478366,21478459-21478696,
           21478786-21478996,21479162-21479361,21479453-21479545,
           21479722-21481093
          Length = 855

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 546 WHTPSVPRAPGLCGLGSQSDHYVQFLQFNVDR 451
           W +P  P +PG    G  SD +VQF  +N  R
Sbjct: 188 WKSPEDP-SPGSFSYGGDSDTFVQFFIWNGSR 218


>05_05_0185 +
           23064249-23064448,23064881-23064950,23065082-23065120,
           23065639-23066067,23067322-23067627
          Length = 347

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 512 SPGARGTEGVCHRSGRGLRPEGRQGYRQMRHQG 610
           SPG RG +G C R  +  R   R   R++RH G
Sbjct: 143 SPGCRGADGRCSRRWKEAR--NRALSRRIRHDG 173


>01_06_0418 +
           29210310-29210612,29211154-29211541,29211946-29212143,
           29212626-29213092,29213210-29213749,29214275-29214477,
           29214567-29214624
          Length = 718

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 253 ELMEMVSADTELVSTLSRKLAPPLVTLLS-AEPEVQYVALRNINLVVQKRP 402
           E+++ +   T L    S  L   +V LL+   PEV Y    N++++++ RP
Sbjct: 324 EIVQSLQTATGLPKAASPALGGLIVGLLALVYPEVLYWGFENVDILLESRP 374


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,405
Number of Sequences: 37544
Number of extensions: 289576
Number of successful extensions: 959
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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