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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021021
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0327 + 2659822-2660232,2660906-2660959                           32   0.46 
02_01_0349 + 2511112-2511576                                           31   1.4  
11_01_0771 + 6453130-6454488                                           30   1.8  
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366...    30   2.4  
03_06_0033 - 31186076-31186189,31186274-31186396,31186524-311867...    29   3.2  
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666...    29   3.2  
11_03_0122 - 10313934-10314069,10315889-10316319                       29   4.3  
06_01_0326 + 2372176-2373057,2373146-2373610                           29   4.3  
10_08_0338 + 16916429-16916650,16916728-16917900                       29   5.6  
09_03_0132 + 12639828-12639972,12640171-12640250                       29   5.6  
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864...    29   5.6  
08_01_0797 + 7711772-7712869                                           28   7.4  
07_01_0091 - 692416-693906                                             28   7.4  
02_03_0258 - 16930027-16930485,16930686-16930991                       28   7.4  
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142     28   9.8  
08_01_1039 + 10548266-10548619,10548734-10549213,10549408-105495...    28   9.8  
07_01_0821 + 6631942-6632144,6632155-6632680,6634264-6634619,663...    28   9.8  
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706...    28   9.8  
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508...    28   9.8  
03_06_0063 - 31391870-31392679                                         28   9.8  
03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759           28   9.8  
02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213     28   9.8  
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460...    28   9.8  
01_06_1691 - 39215192-39215283,39215341-39215413,39215874-392166...    28   9.8  
01_06_1443 - 37399670-37400380                                         28   9.8  
01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078           28   9.8  

>01_01_0327 + 2659822-2660232,2660906-2660959
          Length = 154

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 384 SSPALLGHHEASSRAPQAPPV-APRSPILQPLPV 286
           SSP  LG   AS+R   APP   PR P L PL V
Sbjct: 92  SSPRTLGRSSASARGDDAPPFHLPRRPPLPPLLV 125


>02_01_0349 + 2511112-2511576
          Length = 154

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +2

Query: 272 RNWLTTGSGCRMGERGATG-GAWGARDDASWWPSSAGEL 385
           RNW   G GCR G    TG    GAR    W     GE+
Sbjct: 32  RNWRRGGDGCRSGGWQDTGETVMGARSAGRWSQRMGGEI 70


>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 347 DDASWWPSSAGELQHQQ--QLNEEIGTSTATTSQQM 448
           DD S WP   G++QH+   ++NEE   + A T  +M
Sbjct: 375 DDGSGWPLFVGDIQHKAVIEVNEEGTVAAAATMTRM 410


>01_06_1598 +
           38535077-38535368,38536381-38536463,38536575-38536643,
           38537127-38537182,38537275-38537354,38537496-38537578,
           38537682-38537759,38538133-38538201,38538366-38538434,
           38538520-38538566,38538656-38538746,38538839-38538892
          Length = 356

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 287 TGSGCRMGERGATGGAWGARDDASWW 364
           +G G R+G RGA GG  G  D  +WW
Sbjct: 38  SGGGGRLGARGAAGG--GRGDLGAWW 61


>03_06_0033 -
           31186076-31186189,31186274-31186396,31186524-31186718,
           31186805-31186930,31187024-31187186,31187270-31187405,
           31187557-31187916,31188026-31188124,31188222-31188489
          Length = 527

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 390 CCSSPALLGHHEASSRAPQAPPVAPRSPILQPLPVVN 280
           C SS   L    ASS  P  PP  P + I QP+P+V+
Sbjct: 177 CSSSGGGLKESAASSTRPPFPPSIPSNKI-QPMPIVS 212


>01_01_0854 +
           6662533-6662652,6662727-6662996,6663118-6663171,
           6663723-6663784,6663940-6664008,6664082-6664133,
           6664287-6664460
          Length = 266

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 369 LGHHEASSRAPQAPPVAPRSPILQPLPVVN 280
           L HH A++RAP  PP  PR   L    VV+
Sbjct: 14  LPHHRATTRAPPTPPRIPRRARLPGRSVVS 43


>11_03_0122 - 10313934-10314069,10315889-10316319
          Length = 188

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -3

Query: 373 ATWPPRGIVARTPSAPRRAPFTHPTTA-ACGQPVPLCILSFR 251
           A W  RG++  T +  R  P   P  A  C  P PL +L  R
Sbjct: 103 AKWAARGVIQVTVTHHRTPPLRQPGEARVCRPPPPLLVLPVR 144


>06_01_0326 + 2372176-2373057,2373146-2373610
          Length = 448

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/31 (32%), Positives = 23/31 (74%)
 Frame = -3

Query: 697 VVGSTDDSVEYRSLVDCFDRFLDLTDSATSV 605
           V+GS++  +++ S+ +C D  +D+TD +T++
Sbjct: 252 VMGSSNIWIDHVSMSNCSDGLIDITDGSTAI 282


>10_08_0338 + 16916429-16916650,16916728-16917900
          Length = 464

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 10/78 (12%)
 Frame = +2

Query: 290 GSGCRMGERGATGGAWGARDDASWWPSSAGELQHQQQLNEEIGTSTATTSQ--------- 442
           GSG + G  GA  G WG +  + +   S G        N       A TSQ         
Sbjct: 310 GSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQAAGAGTGYG 369

Query: 443 -QMYSYKMSGGFTSNGNN 493
            Q Y Y   GG  S GN+
Sbjct: 370 SQGYGYGGYGGDASYGNH 387


>09_03_0132 + 12639828-12639972,12640171-12640250
          Length = 74

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -1

Query: 357 EASSRAPQAPPVAPRSPILQPLPVVNQFLYVFCPFEAV*DILNLC 223
           + + RA   PP+ P SP    LP+ +Q  Y FC    V   +  C
Sbjct: 30  QETCRALCLPPLCPLSPYPARLPIDDQNTYEFCSVFLVHTAMRKC 74


>03_02_0458 +
           8643804-8643904,8643994-8644091,8644206-8644504,
           8645930-8646460
          Length = 342

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 375 ALLGHHEASSRAPQAPPVAPRSPILQPLP 289
           A   HH      PQAPP  P     QP+P
Sbjct: 2   AFFSHHHLQQPHPQAPPPPPPQQQQQPVP 30


>08_01_0797 + 7711772-7712869
          Length = 365

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 399 CCWCCSSPALLGHHEASSRAPQAPPVAPRSPILQPLP--VVNQFLYVFC 259
           C W  SSP L    ++S   P++P   PRS +       +VN  L V C
Sbjct: 102 CNWSRSSPRLFDSSDSSRFGPRSPLFIPRSDLEMEESGYIVNDRLTVEC 150


>07_01_0091 - 692416-693906
          Length = 496

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -1

Query: 345 RAPQAPPVAPRSPIL-QPLPV 286
           RAP  PP APR+P+   PLP+
Sbjct: 222 RAPPPPPPAPRAPVYHHPLPL 242


>02_03_0258 - 16930027-16930485,16930686-16930991
          Length = 254

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 272 RNWLTTGSGCRMGERGATGGAWGAR 346
           R W    S C+ GE  A  G WG R
Sbjct: 161 RVWAPMWSSCQQGEGDAGAGGWGGR 185


>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
          Length = 751

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/34 (50%), Positives = 17/34 (50%)
 Frame = +2

Query: 290 GSGCRMGERGATGGAWGARDDASWWPSSAGELQH 391
           GSG   GE G  GG  G R  A WW    GE QH
Sbjct: 682 GSGMGGGEWG--GGEMG-RIMAQWWMGRRGESQH 712


>08_01_1039 +
           10548266-10548619,10548734-10549213,10549408-10549510,
           10549550-10550175
          Length = 520

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 557 NNGGTHQEV*THNKHLHRRRRISQIKKAIKT 649
           NNG  H+E+   N H H  + ++Q+   + T
Sbjct: 258 NNGTVHKEIWGENNHAHIIKELAQLASLVPT 288


>07_01_0821 +
           6631942-6632144,6632155-6632680,6634264-6634619,
           6634683-6634877,6635419-6635623
          Length = 494

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 380 ELQHQQQLNEEIGTSTATTSQQMYSYKMSG 469
           EL+HQ+Q+N ++  +TA    +  S   SG
Sbjct: 446 ELRHQEQMNRKLSIATAAEEAKQLSIPCSG 475


>04_03_0738 +
           19169764-19169897,19169987-19170116,19170614-19170687,
           19171208-19171288,19172054-19172087
          Length = 150

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 360 HEASSRAPQAPPVAPRSPILQPL 292
           H A   A + PP +PR P++ P+
Sbjct: 71  HRAGGEAHRPPPGSPRQPVISPM 93


>04_03_0496 +
           16549333-16549465,16549620-16550020,16550412-16550880,
           16552038-16552076,16553151-16553272,16553531-16553677,
           16554097-16554186,16554274-16554398,16554567-16554772,
           16554951-16555075,16555528-16555722,16556295-16556337,
           16556762-16557267,16558198-16558570,16559772-16560062,
           16560132-16561101,16561196-16561892,16562378-16562658,
           16562731-16563400,16563860-16564034,16565103-16565659
          Length = 2204

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 230 TYVMSSQSVLEFVTNNTKQNRMVKLMIFVFLSLRL 126
           TY+   QS+   + NN +  R++ L I  FL+LR+
Sbjct: 883 TYIGDKQSLYLNLVNNLRLPRLIPLHIDTFLALRI 917


>03_06_0063 - 31391870-31392679
          Length = 269

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -1

Query: 411 SSFNCCWC---CSSPALLGHHEASSRAPQAPPVAPRSPILQPLPV 286
           + F C  C    SS   LG H+ S R     P  P +P+L P PV
Sbjct: 95  AEFKCSVCGKSFSSYQALGGHKTSHRVKL--PTPPAAPVLAPAPV 137


>03_01_0426 + 3292358-3292780,3292858-3293094,3293166-3293759
          Length = 417

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 374 RYLATTRHRRAHPK-RPPSRPVHPSYNR 294
           R  A   H R  P+ RPPS P HP + R
Sbjct: 191 RVRALHEHHRTPPRPRPPSPPQHPRHRR 218


>02_04_0375 - 22464814-22465577,22466930-22466950,22467036-22467213
          Length = 320

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 526 NSNTREASPRQQWWYSSGGVDSQQA-SSP 609
           NSNT +A  R   W+S  GV  +QA +SP
Sbjct: 54  NSNTSKAQRRPGTWFSGNGVGVKQAPASP 82


>02_01_0615 -
           4604373-4604537,4604618-4604707,4604871-4604989,
           4605132-4605234,4605318-4605414,4605512-4605575,
           4605673-4605805,4605899-4606143,4606263-4606439,
           4607110-4607419
          Length = 500

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = -3

Query: 442 LTCSGCTSAYFFI*LLLVLQFTCATWPPRGIVARTPSA-----PRRAPFTHPTTAACGQP 278
           LT    +S+ FF  L+LVL  +C+  P  G   R+P+A     P   P   P T     P
Sbjct: 6   LTPLSSSSSRFFFLLVLVLVLSCSL-PANGRTHRSPAAAASPSPGPGPSPAPATPRVVPP 64

Query: 277 VP 272
            P
Sbjct: 65  AP 66


>01_06_1691 -
           39215192-39215283,39215341-39215413,39215874-39216615,
           39216730-39217985,39218080-39218187,39218289-39218474,
           39218625-39218675
          Length = 835

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +2

Query: 344 RDDASWWPSSAGELQHQQQLNEEIGTSTATTSQQMYSYKMSGGFTSNGNNTTPSYNIELC 523
           RD A   P  A + Q QQQ  ++ G +   T      Y  SGG T+       +  +   
Sbjct: 750 RDGAQPVPQQAQQQQQQQQQQQQAGETGNGTMVHSCRYLSSGGPTAQEIQHQTAQEVPHG 809

Query: 524 LILTQ 538
           ++L+Q
Sbjct: 810 IVLSQ 814


>01_06_1443 - 37399670-37400380
          Length = 236

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 679 DSVEYRSLVDCFDRFLDLTDSATSVKM 599
           DSVEYR  VDC+ R  D   +AT+V M
Sbjct: 198 DSVEYRPDVDCYIRVPD-PSNATAVAM 223


>01_01_0345 + 2752790-2753102,2753309-2754079,2755795-2756078
          Length = 455

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
 Frame = +2

Query: 251 SKGQNT*RNWLTTGSGC---RMGERGATGGAWGARDDASWW 364
           S G+++   WL    G    R G  G  GG  GA   A WW
Sbjct: 83  SGGRSSPPGWLRPAGGGGRRRGGHGGGAGGGVGAGGGAEWW 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,892
Number of Sequences: 37544
Number of extensions: 402988
Number of successful extensions: 1911
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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