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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0020
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...   251   3e-67
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...   251   3e-67
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...   250   6e-67
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25...    60   2e-09
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26...    56   4e-08
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551...    35   0.071
06_01_0080 + 644021-645463                                             33   0.29 
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412...    31   0.66 
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542...    29   2.7  
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065...    29   3.5  
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791...    29   4.7  
03_04_0243 + 19298293-19299117                                         28   6.2  
11_01_0355 + 2679561-2680985,2681183-2682295                           28   8.1  
10_08_0406 - 17688069-17690643,17691065-17691132                       28   8.1  
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968...    28   8.1  
03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379...    28   8.1  
02_03_0134 - 15596379-15597689                                         28   8.1  

>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score =  251 bits (615), Expect = 3e-67
 Identities = 123/211 (58%), Positives = 156/211 (73%), Gaps = 2/211 (0%)
 Frame = +3

Query: 69  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 248
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 249 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
           + IK H DN  N    +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ 
Sbjct: 64  RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123

Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
           VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183

Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
            PFSYGLV+  VYDSG++F+PE+LD+  EDL
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEEDL 214


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score =  251 bits (615), Expect = 3e-67
 Identities = 123/211 (58%), Positives = 156/211 (73%), Gaps = 2/211 (0%)
 Frame = +3

Query: 69  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 248
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 249 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
           + IK H DN  N    +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ 
Sbjct: 64  RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123

Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
           VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183

Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
            PFSYGLV+  VYDSG++F+PE+LD+  EDL
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEEDL 214


>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score =  250 bits (613), Expect = 6e-67
 Identities = 122/211 (57%), Positives = 156/211 (73%), Gaps = 2/211 (0%)
 Frame = +3

Query: 69  REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 248
           +  KA  K  Y  K+ QLLDEY K  I  ADNVGS Q+Q+IR  LRG SIVLMGKNT++R
Sbjct: 4   KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63

Query: 249 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 422
           + IK H DN  N    +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ 
Sbjct: 64  RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123

Query: 423 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 602
           VV+P  NTGL P +TSFFQ L+IPTKI+KGT+EII  V ++K GDKVG+SE+ LL  L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183

Query: 603 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDL 695
            PFSYGLV+  VYDSG++F+PE+LD+  +DL
Sbjct: 184 RPFSYGLVITNVYDSGSVFSPEVLDLTEDDL 214


>11_01_0033 -
           251730-251855,252068-252144,252228-252318,252644-252704,
           252800-252858,252955-253045,253238-253406,253760-253787
          Length = 233

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
 Frame = +3

Query: 27  KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 206
           K  R+   TLS+  ++     K      I   ++ Y   ++   DN+ +Q+++ +R  L+
Sbjct: 3   KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62

Query: 207 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 380
            SS I L GK  M     +   D     L KL   ++G+ G  FT     +V     E +
Sbjct: 63  SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFE 122

Query: 381 VQAPARPGAIAPLSVVI-PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 557
               AR G+I   +V +          E   F +   +P +++KG +E++ D  + + G 
Sbjct: 123 EHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIVCEEGK 182

Query: 558 KVGASEATLLNML--NISPFSYGLVVKQVYDSGTIFAPEILDIKPE 689
            +    A  L +L   ++ F   LV +   D   ++   +  ++ E
Sbjct: 183 PISPEAAQTLRLLGMQMATFRLYLVCRWSSDDFEVYKEGLAQLRAE 228


>12_01_0032 -
           266954-267079,267204-267245,267290-267366,267450-267540,
           267864-267924,268021-268079,268176-268266,268481-268698,
           268818-268824,269013-269148,270064-270307
          Length = 383

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 3/186 (1%)
 Frame = +3

Query: 39  SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 215
           S   TLS+  ++     K      I   ++ Y   ++   DN+ +Q+++ +R  L+ SS 
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202

Query: 216 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 392
           I L GK  M     +   D     L KL   ++G+ G  FT     +V     E +    
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDF 262

Query: 393 ARPGAIAPLSVVI-PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 569
           AR G+IA  +V +          E   F +   +P +++KG +E++ D  + + G  +  
Sbjct: 263 ARTGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISP 322

Query: 570 SEATLL 587
             A  L
Sbjct: 323 EAAQTL 328


>11_01_0676 -
           5511755-5511831,5512857-5513052,5513462-5513577,
           5513752-5514597,5515515-5515766,5522344-5525206
          Length = 1449

 Score = 34.7 bits (76), Expect = 0.071
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
 Frame = +3

Query: 195 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 365
           I L    + L+     +  ++   L N  AL+KL LPH  ++GN+GF+ +  +  ++ D 
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431

Query: 366 LLENKVQAPARPGAIAPLSV----VIPAHN--TGLGPEKTSFFQALSI 491
           +L++     A P  +  LS      I  HN   G  PEK S   +L +
Sbjct: 432 ILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLEL 479


>06_01_0080 + 644021-645463
          Length = 480

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 533 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 426
           I+D  N    N  R  K++EERGLL+   GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135


>02_01_0561 +
           4120268-4120339,4121462-4121588,4121715-4121770,
           4121841-4121912,4122017-4122128,4122247-4122284,
           4122412-4122513,4122619-4122675,4122755-4122826,
           4122992-4123093,4123210-4123405,4123988-4124094,
           4124497-4124691,4124771-4124857,4124905-4124913,
           4125599-4125703,4126067-4126164,4126250-4126328,
           4126912-4127000,4127086-4127200
          Length = 629

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
 Frame = +3

Query: 279 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 437
           PAL+K  L H K     VG + T GDL  +   + L+++KV  P  PGA+  +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187


>01_01_0703 -
           5425713-5425862,5426302-5426451,5426853-5426964,
           5427120-5427481,5427578-5427712,5427812-5427889,
           5427989-5428174,5428266-5428452,5428552-5428658,
           5428732-5428806,5428885-5429040,5429165-5429437,
           5429548-5429643,5429724-5429814,5429883-5430385
          Length = 886

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = +3

Query: 519 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 671
           E++    +++P D VG S   +++ +++ P+S   VV+ +Y+S  + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395


>03_03_0258 -
           15905847-15905990,15906088-15906244,15906374-15906504,
           15906991-15907126,15907193-15907464,15907874-15908169,
           15908279-15908646,15908922-15908987,15909064-15909129,
           15909226-15909297,15909391-15909459,15909549-15909620,
           15909708-15909776,15909874-15909945,15910046-15910178,
           15911223-15911361
          Length = 753

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 649 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 527
           PE    LT RP  +G+ FN LR ++  +PT   G +   S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397


>03_05_0968 +
           29277122-29277445,29278389-29278505,29278957-29279114,
           29279678-29279727,29279968-29280161,29280867-29281049,
           29281152-29281270,29281383-29281522,29281857-29281937,
           29282286-29282389
          Length = 489

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 335 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 240
           G HEA+  L  W+ +  GW    + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218


>03_04_0243 + 19298293-19299117
          Length = 274

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 430 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 287
           + TD+ + APG A A  +   S SRTS  +P  ++ PT P    +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217


>11_01_0355 + 2679561-2680985,2681183-2682295
          Length = 845

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 268 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 390
           W  ++      HTS  TL+  SP+ +S+   T+C+   + +
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520


>10_08_0406 - 17688069-17690643,17691065-17691132
          Length = 880

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +2

Query: 110 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 262
           D P   R  ++FHR  R RG A D A D     W+    +    ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839


>07_03_0196 +
           14995224-14995489,14995859-14995877,14996703-14996839,
           14998365-14998457,15001597-15001932,15003035-15003503
          Length = 439

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -2

Query: 407 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 279
           G   +WS       F  +LN +S   H+  V L+ W   +  W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239


>03_05_0804 +
           27835508-27835805,27836372-27836421,27837306-27837998,
           27838077-27838388,27838528-27838698
          Length = 507

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 541 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 419
           +CT L I+      L+G+ +A+   V SGP P    G T D
Sbjct: 330 ICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGKTGD 370


>02_03_0134 - 15596379-15597689
          Length = 436

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
 Frame = +1

Query: 145 SSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLA 324
           S W P   ARNR S+ ++R  A  S + +K+   ++P           +    T +AT  
Sbjct: 114 SVWPPALTARNRSSKDMNR-TAKSSSAMQKSNLSSRPGVDKMAASSAKQ---RTQKATPG 169

Query: 325 SCSPAET-SLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 447
           + +  +T ++ SV     T  K   V   +P  Q +  P+ P
Sbjct: 170 ALAGGKTQAVPSVRAPGTTTKKTMGVANSVPSIQRTSIPSRP 211


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,651,121
Number of Sequences: 37544
Number of extensions: 491483
Number of successful extensions: 1368
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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