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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A01
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409...    31   1.3  
03_01_0515 - 3864796-3865425                                           31   1.7  
07_01_0080 + 587674-588510                                             30   2.3  
10_08_0745 - 20260136-20260236,20260890-20260937,20261025-202611...    29   4.0  
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    29   5.3  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.3  
02_02_0210 + 7873962-7874753                                           29   5.3  
02_02_0209 + 7866348-7867139                                           29   5.3  
11_06_0610 - 25449085-25453284                                         29   7.0  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   9.2  
01_05_0046 + 17544692-17544904,17545185-17545661,17545826-17546041     28   9.2  

>12_02_0370 +
           18139557-18140469,18140561-18140704,18140804-18140956,
           18141032-18141147,18141231-18141398,18142110-18142334,
           18142458-18142577
          Length = 612

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
 Frame = +2

Query: 728 SXXTXPXXPXRAVPSVCHXTXRXXXPPPXXXPPRLPGVFS-XPPXXXXPXPXXXXXXXPP 904
           S  + P    R++P V         PPP    P +P V S  PP    P P       PP
Sbjct: 29  SSPSQPTTTSRSIPVVLPSAPSSKPPPPTQTAPPVPVVISEPPPPQPQPEPQPAAPSQPP 88


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 17/66 (25%), Positives = 20/66 (30%)
 Frame = +2

Query: 707 PTXNISSSXXTXPXXPXRAVPSVCHXTXRXXXPPPXXXPPRLPGVFSXPPXXXXPXPXXX 886
           P  +++SS       P    P           PPP   PP  P     PP    P P   
Sbjct: 53  PPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPV 112

Query: 887 XXXXPP 904
               PP
Sbjct: 113 KSSPPP 118


>07_01_0080 + 587674-588510
          Length = 278

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = +2

Query: 803 PPPXXXPPRLPGVFSXPPXXXXPXPXXXXXXXPPLXTLRXH 925
           PPP   PP   G    PP    P P       PPL T R H
Sbjct: 91  PPPPPPPPPSSG---SPPPPPPPPPPPPPPPPPPLFTRRSH 128


>10_08_0745 -
           20260136-20260236,20260890-20260937,20261025-20261165,
           20261358-20261603,20261744-20262583,20263253-20263286
          Length = 469

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = -2

Query: 306 LLKSCASFDLVSELNCCSKVLWNSLVWCSMSLKKSGASRRTIAXLGQSDAG-EENYELGG 130
           LL +C+  D + E  CC  V   ++V  ++ +   GA+    + +  SDAG     +  G
Sbjct: 205 LLDACSDVDPLKE--CCRPVCQPAIVEAAVHISSGGANMFGSSSISGSDAGINVVSDCKG 262

Query: 129 --HDVLXERLSAEEMRT 85
             H  L  +LS+EE  T
Sbjct: 263 VVHSWLSMKLSSEESNT 279


>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +2

Query: 503 EKLQAAVQNTVQESQKLXKKVSSNVXETNEKLAPKI 610
           EKLQ  + +  QE+Q+L KK+SS V E +++   ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEV 187


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
 Frame = +2

Query: 743 PXXPXRAVPSVCHXTXRXXXPPPXXXPPRLPG-VFSXPPXXXXPXPXXXXXXXPP 904
           P  P    P +         PPP   PP LP  +   PP    P P       PP
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPP 619


>02_02_0210 + 7873962-7874753
          Length = 263

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -2

Query: 243 WNSLVWCSMSLKKSGASRRTIAXLGQSDAG-EENYELGGHDVLXERLSAEEMRTGTANXR 67
           WN+ + C      SGA+ R     G+ DAG EE+ E G          A  +  G A  R
Sbjct: 45  WNTPLRCWRRWWCSGATSRRGGMGGRKDAGDEEDGEAGAATAFRRNRGAAGVEGGVAEPR 104

Query: 66  RSVSKS 49
             V+ S
Sbjct: 105 EVVATS 110


>02_02_0209 + 7866348-7867139
          Length = 263

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = -2

Query: 243 WNSLVWCSMSLKKSGASRRTIAXLGQSDAG-EENYELGGHDVLXERLSAEEMRTGTANXR 67
           WN+ + C      SGA+ R     G+ DAG EE+ E G          A  +  G A  R
Sbjct: 45  WNTPLRCWRRWWCSGATSRRGGMGGRKDAGDEEDGEAGAATAFRRNRGAAGVEGGVAEPR 104

Query: 66  RSVSKS 49
             V+ S
Sbjct: 105 EVVATS 110


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 803  PPPXXXPPRLPGVFSXPPXXXXPXPXXXXXXXPP 904
            PPP   PP    V S PP    P P       PP
Sbjct: 1162 PPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPP 1195



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 803  PPPXXXPPRLPGVFSXPPXXXXPXPXXXXXXXPP 904
            PPP   PP    V S PP    P P       PP
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPP 1227



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 803  PPPXXXPPRLPGVFSXPPXXXXPXPXXXXXXXPP 904
            PPP   PP    V S PP    P P       PP
Sbjct: 1226 PPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPP 1259


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = +2

Query: 803 PPPXXXPPRLPGVFSXPPXXXXPXPXXXXXXXPPLXTL 916
           PPP    P LP +FS PP    P P       P L  L
Sbjct: 271 PPPAFPFPHLPPIFS-PPSPPPPPPPAFPFPFPQLPPL 307


>01_05_0046 + 17544692-17544904,17545185-17545661,17545826-17546041
          Length = 301

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 188 APSLPWARAMQAKRTTNLAAMMYCXRD*VRRRC 90
           APS PW   ++ + T     +    R  VRRRC
Sbjct: 172 APSSPWTHMLRVRSTATRVILGMTARKPVRRRC 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,753,049
Number of Sequences: 37544
Number of extensions: 265600
Number of successful extensions: 1142
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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