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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A17
         (445 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0033 + 27820563-27823482,27823593-27823996                       30   0.96 
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287...    29   1.7  
02_05_0627 + 30463452-30463774,30463841-30463956,30464125-304643...    28   2.9  
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641...    28   3.9  
11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368           27   6.8  
04_04_1392 + 33201015-33201600,33202030-33202406,33202528-332026...    27   6.8  
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187...    27   6.8  
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709...    27   9.0  
07_03_0475 + 18544637-18544772,18544925-18545031,18545114-185452...    27   9.0  
07_03_0154 + 14509979-14512033                                         27   9.0  

>11_08_0033 + 27820563-27823482,27823593-27823996
          Length = 1107

 Score = 29.9 bits (64), Expect = 0.96
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 69  GVTENVSLQDKRCRRSVCGAPEKGFIPFP 155
           GV  N++L+  R    +CG+P  G +P P
Sbjct: 709 GVFSNITLKSLRGNAGLCGSPRLGLLPCP 737


>08_01_0321 +
           2872609-2873027,2873477-2873905,2874743-2874944,
           2875909-2875947,2876309-2876354,2877380-2877922,
           2878827-2880847,2880972-2881215,2881642-2881684,
           2881923-2881962,2883580-2883675,2883712-2883759,
           2883964-2884290
          Length = 1498

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 367 SRTSGKEQ*PLPLASGRRWRTHSTWED 287
           SRT G    P P  S RRWR H   +D
Sbjct: 404 SRTRGARNSPPPPTSARRWRPHPPADD 430


>02_05_0627 +
           30463452-30463774,30463841-30463956,30464125-30464371,
           30464458-30464555,30465216-30465284,30465752-30465820,
           30465913-30466028
          Length = 345

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 445 RTRTVPHLGAHERKRHSCRRFQSL*HSRTSGKEQ*PLPLASGR 317
           +T ++PHL  H R+R   RRF  L  +  S     PLP AS +
Sbjct: 28  QTVSIPHLSPHTRRRRQ-RRFLRLASAAASSPP--PLPAASAQ 67


>06_03_0499 +
           21461608-21463427,21463517-21463627,21463867-21464143,
           21464265-21464353,21464508-21464595,21464698-21464907,
           21464985-21465110,21465429-21465620,21466532-21467188
          Length = 1189

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -2

Query: 414 TSESGTLVEGFKVFSIVEQVEKSNSLFP*LLVEDGELIVLGKITDSVQF 268
           +S +G +   FK+ +++E   K   +   L  EDG++++  K  DS+ F
Sbjct: 599 SSSNGPVEREFKILNLLEFNSKRKRMSVILKDEDGQILLFCKGADSIIF 647


>11_01_0398 - 3008074-3008428,3009775-3009926,3010070-3011368
          Length = 601

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 27  PSSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAPEKGFIPFPRCRPS 170
           PS + A    + Q GV  +VSL+     ++   + +K + PF  C PS
Sbjct: 296 PSPTKAQSRGSPQLGVPLHVSLKTCSHPQNASSSGQKKYTPFEECYPS 343


>04_04_1392 +
           33201015-33201600,33202030-33202406,33202528-33202638,
           33202720-33202815,33202899-33203570
          Length = 613

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 342 SLFP*LLVEDGELIVLGKITDSVQFQEFFNSFLIGVVID 226
           S FP  + E GE+ V GK+ D +       SF + V ++
Sbjct: 500 SKFPSAISESGEITVEGKVKDGIPHLTKVGSFQVDVSLE 538


>01_06_0006 -
           25517892-25517935,25518156-25518276,25518598-25518733,
           25519189-25519280,25519358-25519426,25519710-25519821,
           25519897-25520015,25520302-25520355,25520811-25520891,
           25520968-25521051,25521124-25521315,25521633-25521746,
           25521832-25521978,25522066-25522302,25522762-25522810,
           25522894-25523027,25523124-25523324,25523532-25523701,
           25523773-25523875,25524198-25524361,25525015-25525055,
           25525144-25525187
          Length = 835

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
 Frame = +1

Query: 106 VDAVFVERQKKVLSLFQDVDQVNVDDEYYK-------IGKDYDVEANIDNYTNKKAVEEF 264
           VD V+   Q+K + +++ +    +++  Y+       I K    E +   Y NK   +EF
Sbjct: 651 VDRVYRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEERDFRRYINKLGYKEF 710

Query: 265 LKLYRIGY 288
           LKL  +G+
Sbjct: 711 LKLPEMGF 718


>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
            7097150-7097367,7097502-7097717,7097922-7098107,
            7098181-7098303,7098399-7098514,7099254-7099832,
            7101485-7101517,7102485-7103679,7103732-7103797,
            7104843-7104905,7105328-7105411
          Length = 1407

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
 Frame = +1

Query: 121  VERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANIDNYTNKKA--VEEFLKLYRIGYLP 294
            V+ +  +L +  +V    ++    KIG D D +    +Y+  K+  VEE  + +R  +L 
Sbjct: 1230 VDFKNTLLIMTSNVGSSVIEKGGRKIGFDLDYDEKDSSYSRIKSLVVEEMKQYFRPEFLN 1289

Query: 295  KYYEFSIFYQ--KLREEAIA 348
            +  E  +F Q  KL  + IA
Sbjct: 1290 RLDEMIVFRQLTKLEVKEIA 1309


>07_03_0475 +
           18544637-18544772,18544925-18545031,18545114-18545295,
           18545467-18545599,18545708-18545920
          Length = 256

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 235 YTNKKAVEEFLKLYRIGYLPKYYEFSIFYQKLREEAIAL 351
           Y NK  V    K+      P Y EF I+YQ+  ++ IA+
Sbjct: 147 YPNKNIV---FKITESSNFPNYLEFEIWYQQGNQDIIAV 182


>07_03_0154 + 14509979-14512033
          Length = 684

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +3

Query: 27  PSSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAPEKGFIPFPRCRP 167
           PSSS    P A    +  N     KR  +S   +PE+G +P P   P
Sbjct: 7   PSSSAPSSPAASSDSIDLNFLPFLKREPKSEPASPERGPLPLPAAAP 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,872,375
Number of Sequences: 37544
Number of extensions: 205487
Number of successful extensions: 535
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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