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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A05
         (539 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0750 - 6315126-6315896,6316371-6316784                           32   0.25 
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984...    29   3.1  
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548...    28   4.1  
05_07_0209 + 28420008-28421510                                         28   4.1  
03_02_0872 - 11983151-11983432,11983488-11983598,11983744-119840...    28   4.1  
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544...    28   5.5  
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852...    27   7.2  
06_03_0799 - 24703634-24703766,24703937-24704123,24704468-247046...    27   7.2  
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804     27   7.2  
01_04_0065 + 15627559-15627987,15630933-15631176,15632198-15632703     27   9.6  

>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +3

Query: 327 ANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPI 500
           A  ++     +L  +F   +   Y S  +  DF +  + A D IN W  + T+G + + +
Sbjct: 103 AGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLL 162

Query: 501 SDDTIDPNAAAAL 539
              TID N    L
Sbjct: 163 PAGTIDQNTGLVL 175


>08_01_0978 +
           9841441-9842169,9842303-9842590,9842768-9843612,
           9843941-9844223,9844303-9844416
          Length = 752

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 372 FTSSSRQYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 530
           +     ++  E E +  S+T++  ADI  QWA    R  +K   SD+T+  PN A
Sbjct: 182 YAGKQAEWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235


>10_08_0960 -
           21853010-21853282,21854078-21854449,21854555-21854862,
           21854946-21855102
          Length = 369

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 462 ANEKTRGHIKSPISDDTIDPNAAAA 536
           A  + RG  KSP  DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264


>05_07_0209 + 28420008-28421510
          Length = 500

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 297 SEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETID 419
           + MNP  FT+  +    NK +L E+FT+S   Y S  ++++
Sbjct: 310 ASMNPRVFTVVEQEADHNKSSLLERFTNSLFYYASMFDSLE 350


>03_02_0872 -
           11983151-11983432,11983488-11983598,11983744-11984007,
           11984038-11984163,11984257-11984481,11984757-11985311,
           11985390-11985695,11985815-11986369
          Length = 807

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -3

Query: 270 DWWPHYNLHHPKTCRFSTGFP*PAPDL*RSISIITPNGEDTTFLSFPD 127
           DWW      HP   +F  G P   P++ R    +  +G  T+F++  D
Sbjct: 280 DWWAANTKGHPDWKKFRKGLPEYLPEMDRMFEGVAVDG-STSFVATAD 326


>01_06_1630 +
           38753016-38753209,38753904-38754039,38754291-38754404,
           38755053-38755112,38755223-38755252,38755523-38756206
          Length = 405

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +1

Query: 325 WPIKSTSEINILWMRNSRALPVSTKARLKLLTSAIPKKQLTSLISG---LMRRPEDILNL 495
           W +   S +N+ + R S  +PV+      L +  +   +LT  I G   L+ R E     
Sbjct: 266 WQLPDLSSLNLSYNRFSGEIPVNISEMTYLYSIGLQHNKLTGSIPGKFALLSRLESFNVS 325

Query: 496 QSLMTP*IPMQLPR 537
            +L++  IP+ L +
Sbjct: 326 DNLLSGPIPVALSK 339


>10_05_0047 +
           8524345-8524414,8524687-8524776,8525004-8525306,
           8525413-8525872,8525962-8526043,8526157-8526351
          Length = 399

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +3

Query: 258 EATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETI 416
           E  N      K   E N D  T  NK+   ++ T +EK  S+ R+ + + E I
Sbjct: 335 EGDNSERKREKALEEYN-DEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386


>06_03_0799 -
           24703634-24703766,24703937-24704123,24704468-24704630,
           24705533-24705718,24705978-24706105,24706282-24706411
          Length = 308

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 237 WGDVNYSEATNPYISLSKTFSEM 305
           W DV+Y  AT  + +L KT +E+
Sbjct: 138 WSDVDYCRATKNWYTLGKTLAEI 160


>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
          Length = 1209

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
 Frame = +3

Query: 261 ATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSD---- 428
           A N  + L +    ++   FT  +K+  G+  T ++   S    + S   T+  ++    
Sbjct: 685 ANNGALLLRQFVQTLSGPAFTWYSKLAPGSIRTWEQMQDSFLEHFYSTQRTVGITELTQT 744

Query: 429 ----TKKAADIINQWANEKTRGHIKSPISD 506
                +KAAD IN+W N     H   PI++
Sbjct: 745 EQRANEKAADFINRWRNLSL--HCPQPITE 772


>01_04_0065 + 15627559-15627987,15630933-15631176,15632198-15632703
          Length = 392

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +2

Query: 68  TALGDAIDKTSMKLLKEAYTSGKDKNVVSSPLGVMMLMLLYKSG-AG*GNPVENR 229
           T +GD  D    K+ KE    GKD   V +   ++ + +    G    G P+ENR
Sbjct: 101 TEIGDKDDPRLSKMRKEVVAGGKDTMEVDNDFFLVPVKISDHQGPLSTGFPIENR 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,167,838
Number of Sequences: 37544
Number of extensions: 278786
Number of successful extensions: 656
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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