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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_B03_e18_03.seq
         (1520 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814...   217   2e-56
04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351...   209   5e-54
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213...   122   1e-27
02_05_0756 - 31534011-31534141,31534235-31535338,31535448-315356...    31   1.8  
11_06_0371 + 22774245-22774413,22774504-22774670,22775538-227756...    29   7.3  
08_02_0222 + 14446967-14448310                                         29   9.7  

>08_01_0835 +
           8147177-8147359,8147871-8147968,8148045-8148102,
           8148192-8148271,8148770-8148872,8148966-8149181
          Length = 245

 Score =  217 bits (530), Expect = 2e-56
 Identities = 109/236 (46%), Positives = 149/236 (63%)
 Frame = +2

Query: 179 VXKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERD 358
           V K   VPESV               +  L  +  +++ RK IF RA+QY +EY  +E++
Sbjct: 5   VAKAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKE 64

Query: 359 EIRLARQARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNK 538
            ++L R+AR +G +YV  EAKL FV+RIRG+N + PK RK+LQL RLRQI NGVF+++NK
Sbjct: 65  LVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNK 124

Query: 539 ATVNMLRIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITFNSLIEKRLSKQNXICV 718
           AT+NMLR  EPY+A+GYPNLKSVREL+YKRG+ KLN +R+P+  N +IE+ L K + IC+
Sbjct: 125 ATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLQNNKVIEEGLGKHDIICI 184

Query: 719 EDLIPLRYFTXGEKFKYXSYFLWAXQTEQTRLEGXRXKTIPTXXXGXFGXXEXKVN 886
           EDL+     T G  FK  + FLW  +  +  L G + K       G  G  E  +N
Sbjct: 185 EDLVH-EIMTVGPHFKEANNFLWPFKL-KAPLGGLKKKRNHYVEGGDAGNREDYIN 238


>04_04_1075 +
           30634141-30634320,30634917-30635014,30635113-30635170,
           30635259-30635338,30635686-30635788,30635847-30636080
          Length = 250

 Score =  209 bits (510), Expect = 5e-54
 Identities = 108/236 (45%), Positives = 147/236 (62%), Gaps = 6/236 (2%)
 Frame = +2

Query: 197 VPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERDEIRLAR 376
           VPESV               +  +  +  SI+ RK IF RA+QY +EY  +E++ ++L R
Sbjct: 10  VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69

Query: 377 QARNRGNYYVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNML 556
           +AR +G +YV  E KL FV+RIRG+N + PK RK+LQL RLRQI NGVF+++NKAT+NML
Sbjct: 70  EARMKGGFYVSPEEKLLFVVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINML 129

Query: 557 RIAEPYIAWGYPNLKSVRELVYKRGFAKLNGKRVPITFNSLIEKR------LSKQNXICV 718
           R  EPY+A+GYPNLKSVREL+YKRG+ KLN +R+P+T N +IE+       L K + IC+
Sbjct: 130 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIPLTNNKVIEESWCLYQGLGKHDIICI 189

Query: 719 EDLIPLRYFTXGEKFKYXSYFLWAXQTEQTRLEGXRXKTIPTXXXGXFGXXEXKVN 886
           EDL+     T G  FK  + FLW  +  +  L G + K       G  G  E  +N
Sbjct: 190 EDLVH-EIMTVGPHFKEANNFLWPFKL-KAPLGGLKKKRNHYVEGGDAGNRENYIN 243


>08_02_1442 +
           27120604-27120890,27121029-27121166,27121280-27121382,
           27121877-27122036,27122927-27123114,27123203-27124770,
           27124882-27125869,27126595-27127098,27127347-27127433,
           27127753-27127821,27128012-27128041
          Length = 1373

 Score =  122 bits (293), Expect = 1e-27
 Identities = 67/179 (37%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
 Frame = +2

Query: 269 KRRSASIKKRKE----IFKRAEQYVKEYRIKERDEIRLARQARNRGNYYVPGE---AKLA 427
           +R++A  ++R++      KR E +V+E+R KE D +R+  + + R     P E   +KL 
Sbjct: 32  ERKAAKRQRRRDDGKGAIKRPEDFVREFRNKELDFVRMKTRLKVRK--LPPAETLNSKLV 89

Query: 428 FVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSV 607
           F IRI G   + P +R++L+  RL Q+  GVF++   AT+  L + EP+I +G+PNLK+V
Sbjct: 90  FAIRIPGTMDLHPHMRRILRKLRLTQVLTGVFLKATDATMKRLLVVEPFITYGFPNLKNV 149

Query: 608 RELVYKRGFAKLNGKRVPITFNSLIEKRLSKQNXICVEDLIPLRYFTXGEKFKYXSYFL 784
           ++L+YK+G   L+ +  P+T N LIEK L +   IC+EDL+     + G  F+  S FL
Sbjct: 150 KDLIYKKGRGFLDKEPFPLTSNDLIEKALGEYGIICLEDLVH-EIASVGPHFREASNFL 207


>02_05_0756 -
           31534011-31534141,31534235-31535338,31535448-31535692,
           31535789-31535940,31536051-31536158
          Length = 579

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 451 DTTNTDDKC*FSFTGHIIIATVTSLSCQSDFITLLDAVFFDILFGSLKDFFP 296
           D TN  +KC     G+   A++ ++S QS  I +LDA ++    G  ++ FP
Sbjct: 382 DPTNMAEKCKEGPQGNRFAASLNNVSFQSPAIDVLDAYYYSSGHGVYEEDFP 433


>11_06_0371 +
           22774245-22774413,22774504-22774670,22775538-22775631,
           22775723-22775871,22775950-22776042,22776167-22776235,
           22776236-22776415,22776465-22776518,22776739-22776905,
           22777180-22777314,22777386-22777479,22777567-22777848
          Length = 550

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 219 CFKTDSGTAGNFXTVLFTLHRFFLGRSLLFC 127
           CF+T++G AG     L+ +H+F      +FC
Sbjct: 368 CFRTEAGAAGAATRGLYRVHQFSKVEMFVFC 398


>08_02_0222 + 14446967-14448310
          Length = 447

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 135 EGCGRE-KTCEG*RGQXXSCQLFRNQS*STVKGGRHSELAVFRSH 266
           +G GR+ +TC+G RG+  + +L R  +     GG   E  VF  H
Sbjct: 74  DGEGRQARTCDGGRGRWITQRLERTGNLRLAGGGGSGEAVVFEKH 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,412,130
Number of Sequences: 37544
Number of extensions: 521939
Number of successful extensions: 1061
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4884487468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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