Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40019
(842 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 3e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 1e-04
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 41 0.001
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.008
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.013
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 37 0.018
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.041
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.041
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.13
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.29
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.51
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 31 1.2
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 31 1.2
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.2
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 4.7
SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2) 29 4.7
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16) 29 6.2
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 100 bits (239), Expect = 2e-21
Identities = 52/112 (46%), Positives = 70/112 (62%)
Frame = +2
Query: 2 IYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRA 181
+YR YFG YDT + +L ++ +VIS+ + VT AG+ SYP DT+RRRMMM SG A
Sbjct: 188 VYRGFYFGLYDTLKPILLG-EDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEA 246
Query: 182 KSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAFVLVLYDEIKKV 337
+ YK +I C I K EG L KGA +N+LRG GA VL +D+ K++
Sbjct: 247 ---VKYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGFDKFKEL 295
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +2
Query: 62 KNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 241
+ P+ V+ +YP D VRRRM M+ RA D YK+T+H +++I K E
Sbjct: 157 RELPVNFKLMCGSLAGAVSQTATYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSIVKLE 214
Query: 242 GTSGLFKGAFSNVLR 286
G GL+KG + N+L+
Sbjct: 215 GFRGLYKGMWPNILK 229
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Frame = +2
Query: 71 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTS 250
P+V VA +YP D VRRRM M+ G Y +T + I ++EG
Sbjct: 680 PVVAKLFCGAVAGAVAQSGTYPLDVVRRRMQMERGEGM--FKYSSTWDGFKVIVRSEGFI 737
Query: 251 GLFKGAFSNVLR 286
GLFKG + N+L+
Sbjct: 738 GLFKGMWPNLLK 749
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +2
Query: 131 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVL 283
YP D V+ RM Q +++ +YKN+I C+ + + EG GL++G +L
Sbjct: 932 YPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 42.3 bits (95), Expect = 5e-04
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 5 YRASYFGFYDTARGMLPDPKNTPIVISWA-IAQTVTTVAGIIS-YPFDTVRRRMMMQSGR 178
Y A + ++ L DP N + S + +A T +T+ +++ YP + ++ R+ +Q
Sbjct: 127 YSAVQYAAFNRIVASLEDPHNGELSDSGSMLAGTSSTLIAMVTVYPCEVIKTRLTVQHVN 186
Query: 179 AKSDILYKNTIHCWATIAKTEGTSGLFKG---AFSNVLRGTGGAFV 307
KS+ YK H TI + EG L+KG +F + GG+F+
Sbjct: 187 -KSNAHYKGMRHALKTILREEGILALYKGVTPSFLGLFPFAGGSFL 231
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 113 VAGIISYPFDTVRRRMMMQSGRAKSD--ILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR 286
V I P D + +M +Q RA+S I Y+N H TIA+T G G ++G + ++R
Sbjct: 214 VVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVR 273
Query: 287 G-TGGAFVLVLYDEIKKVL 340
F Y+ K +L
Sbjct: 274 NIPANGFFFGFYEFTKNLL 292
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 40.3 bits (90), Expect = 0.002
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 2 IYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT--VAGIISYPFDTVRRRMMMQSG 175
IY ++ G Y+ + +L +T + I V++ + I+ P D V+ R Q+
Sbjct: 88 IYSSTRLGAYEPIKNLLGATDSTSAALWKKIVAGVSSGVIGSAIATPTDLVKIRF--QAV 145
Query: 176 RAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTG-GAFVLVLYDEIKKVL 340
+ I YKN H + IAK EG GL+ G V R + YD K +L
Sbjct: 146 KIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPTVKRAACISGTQIPTYDHTKHLL 201
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 86 WAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFK 262
W++ T +T+ +++ YP + ++ R+ +Q KS+ YK H TI + EG L+K
Sbjct: 424 WSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVN-KSNAHYKGMRHALKTILREEGILALYK 482
Query: 263 GAFSNVL 283
G + L
Sbjct: 483 GVTPSFL 489
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 116 AGIISYPFDTVRRRMM-MQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGT 292
A ++ +P DT++ R+ M + +YKN+ C+ I + EG LF+G +L
Sbjct: 52 ANLVGFPLDTIKVRLQAMPLPKPGEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSI 111
Query: 293 GGAFVL 310
VL
Sbjct: 112 PNTTVL 117
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 86 WAIAQTVTTVAGIISYPFDTVRRRMMMQS---GRAKSDILYKNTIHCWATIAKTEGTSGL 256
+ + T + A + P + V+ RM +Q R + Y+N H TIAK EG +
Sbjct: 8 FVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAM 67
Query: 257 FKGAF 271
KG F
Sbjct: 68 QKGLF 72
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 125 ISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG-TSGLFKGAFSNVLRGTGG- 298
++YP D VRRRM + +G Y I+ + ++ +G GL++G N LR
Sbjct: 123 LAYPLDVVRRRMQL-AGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVCPQV 181
Query: 299 AFVLVLYDEIKKVL 340
A + +Y+ +K++L
Sbjct: 182 AVMFAVYEVVKQLL 195
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 113 VAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG-TSGLFKGAFSNVLR 286
V+ I+YP D VRRRM + +G Y I+ + K +G GL++G N LR
Sbjct: 185 VSQTIAYPLDVVRRRMQL-AGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLR 242
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Frame = +2
Query: 74 IVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSG-----------RAKSDILYKNTIHCW 220
I++ + A ++A + P DT + R+ +Q R D Y+ +
Sbjct: 14 ILVKFCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTM 73
Query: 221 ATIAKTEGTSGLFKGAFSNVLRGTGGAFVLV-LYDEIK 331
T+ KTEG ++KG + R A + + LYD++K
Sbjct: 74 VTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVK 111
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 92 IAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGA 268
IA +V V G+ + P DT++ R+ G D+L A KTEG GL+KG
Sbjct: 74 IAGSVGGVTGVTAGQPLDTIKVRLQASFGAGPLDML--------ARTVKTEGVRGLYKGM 125
Query: 269 FSNVL 283
+ VL
Sbjct: 126 LAPVL 130
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 101 TVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKG 265
T VA ++P D VR R+ +Q +S Y + I EG GL+KG
Sbjct: 37 TAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKG 91
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/67 (22%), Positives = 32/67 (47%)
Frame = +2
Query: 131 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRGTGGAFVL 310
YP + ++ R+ +Q + LY ++ + + +TEG GL+KG + G +
Sbjct: 34 YPANLIKIRLQVQ----RKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGLFAGQCYI 89
Query: 311 VLYDEIK 331
Y+ ++
Sbjct: 90 TTYELVR 96
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 17/105 (16%)
Frame = +2
Query: 2 IYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT-----VAGIISYPFDTVRRRMMM 166
+ + + G Y R DP T + + V V +I YPF+TV R+ +
Sbjct: 245 LIKMGHTGLYGDTRDCNEDPPPTSDMTQSYYPELVANFMAFVVPDLILYPFETVLHRLYI 304
Query: 167 QSGRAKSDIL------------YKNTIHCWATIAKTEGTSGLFKG 265
Q R D L Y + + C+ TI + EG G ++G
Sbjct: 305 QGTRTIIDDLDNAADVIPLSTNYFSMLDCFRTIYQQEGIFGFYRG 349
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 11 ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKS 187
A YFG Y+ + + V ++ +A V S +PFD ++ R+ K
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGK- 168
Query: 188 DILYKNTIHCWATIAKTEGTSGLFKGAFSNVLRG 289
YK + C K EG +G + +LRG
Sbjct: 169 -FRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRG 201
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 125 ISYPFDTVRRRMMMQSGRAKSDIL--YKNTIHCWATIAKTEGTSGLFKGAFSNVLRGT-G 295
IS P D V+ +M M+ R + + T H + I G GL+KG NV R
Sbjct: 148 ISSPTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLPNVQRAALV 207
Query: 296 GAFVLVLYDEIK 331
L YD +K
Sbjct: 208 NMGDLTTYDTVK 219
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 116 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVLR-GT 292
A ++ P +T++ + + + + + YK TI KTEG G++KG + V++ G+
Sbjct: 151 AVVVVCPMETIKVKFIHD--QTQPNPKYKGFFSGVRTILKTEGFFGVYKGLTATVIKQGS 208
Query: 293 GGAFVLVLYDEIKKVL 340
+Y +K L
Sbjct: 209 NQMIRFFVYSNLKSWL 224
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 116 AGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSGLFKGAFSNVL 283
A + P D ++ R+ + + R + + Y I C I EG + +KGA ++
Sbjct: 219 ASVAVNPLDVIKTRLQLLN-RPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273
>SB_26015| Best HMM Match : ANATO (HMM E-Value=3.2)
Length = 474
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 211 PLLGYHCQDRGNLGPLQGSLLQRPQRYWWCLRARLV 318
P+ GY C RG +GP+ G L + + W R V
Sbjct: 306 PVAGYVCAKRGFVGPVLGGALMQYFAFRWTAAVRHV 341
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 310 EHEGTTSTSEDVGEGSLEEARGSLGLGNGSPAVD 209
+HEG S +E G+GS EEAR + G N + V+
Sbjct: 375 QHEGFNSLTE--GDGSDEEARSNAGTPNANAIVN 406
>SB_27075| Best HMM Match : rve (HMM E-Value=1.5e-16)
Length = 656
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 14 SYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTVAGIISYPFDTVRRRMMMQSGRAK 184
SY G T++G+ PDP+ VI + V + G ++Y ++ + +Q
Sbjct: 58 SYVGHRLTSQGLQPDPEKIKAVIDMPPPTDKEGVQRLIGTVNYLDKFIKNKAEIQG--PI 115
Query: 185 SDILYKNTIHCWAT 226
S +L K+ I W T
Sbjct: 116 SQLLQKDAIFVWDT 129
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 8 RASYFGFYDTARGMLPDPKNTPIVISW---AIAQTVTTVAGIISYPFDTVRRRMMMQSGR 178
+ SY G T++G+ PDP+ VI + V + G ++Y ++ + +Q
Sbjct: 516 KVSYVGHRLTSQGLQPDPEKIKAVIDMPPPRDKEGVQRLIGTVNYLDKFIQNKAEIQG-- 573
Query: 179 AKSDILYKNTIHCWAT 226
S +L K+ I W T
Sbjct: 574 PISQLLQKDAIFVWDT 589
>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 227 IAKTEGTSGLFKGAFSNVLRGT-GGAFVLVLYDEIKKVL 340
IA+TEG LFKG N+L T A Y ++K+ L
Sbjct: 796 IARTEGARSLFKGLCPNLLAVTPSRAIYFTTYQKLKEWL 834
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,160,398
Number of Sequences: 59808
Number of extensions: 469734
Number of successful extensions: 1154
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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