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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10394
         (574 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.38 
SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)               30   1.2  
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         30   1.2  
SB_52932| Best HMM Match : Ank (HMM E-Value=0)                         29   2.0  
SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)                 28   4.7  
SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)                 28   6.2  
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     27   8.2  

>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 779

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = +3

Query: 96  KIVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIV--AVRGSYVTRTL 269
           ++ +SE  +SP  +Y+  F+++N     E+ + K++   +NK    V  +   S  T  +
Sbjct: 148 RVTKSESLSSPSNSYSQAFKSNNSR-EEESLDPKKSSGTENKSFETVKGSESRSKETPAV 206

Query: 270 TANLKPLRTSL 302
           TAN+K LRT +
Sbjct: 207 TANIKELRTQI 217


>SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)
          Length = 488

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 108 SEFDASPDGAYNYNFETSNGIVRSETGE 191
           +E DA PDG+YN++ ++   +V +ETGE
Sbjct: 218 TEEDAKPDGSYNFDHKS---VVNTETGE 242


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +3

Query: 192 LKEALDDDNKPHVIVAVRG---SYVTRTLTANLKPLR 293
           +K+AL   NKPHV++A  G    ++  T T NLK ++
Sbjct: 116 MKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQ 152


>SB_52932| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1266

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 159 SNGIVRSETGELKEALDDDNKPHVIVAVRGSYVTRTLTANLKPLRTSLTRLDTMLRVNLF 338
           S  + +  TG  K  LDD  KPHV+  ++ SY+   L  +   LR  LTR    +   L 
Sbjct: 204 SKTVTKMFTGFRKLTLDDLRKPHVVKDIQ-SYILNRLDDD-SELRKHLTRETAEIFNQLH 261

Query: 339 LRS 347
           ++S
Sbjct: 262 IKS 264


>SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 417

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 75  PPTEDYPKIVRSEFDASPDGAY 140
           PPT+DY +  RS+ D S DG Y
Sbjct: 17  PPTKDYDRRSRSQDDDSDDGCY 38


>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
          Length = 1182

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
 Frame = -3

Query: 284 FQVCRQCSCNVASTHSNNNVRLVVVVESLLQLTSFATHDAVG-SLEIVVVSSIGAGVEFR 108
           F +CR C C   ++  N    + V  +          H+ VG + E   V   G   +  
Sbjct: 324 FPLCRPCRCYGHASSCNPKTGVCVDCQ----------HNTVGKNCEACAVGFYGIATKGT 373

Query: 107 PNDLRVVLCRGGSDDGSHKGESYND 33
           PND +   C GGS         Y D
Sbjct: 374 PNDCKRCQCPGGSSGNKFSESCYVD 398


>SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 164

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 113 IRRQPRWSLQLQFRDFQRHRA*RNW*AEGGSRRRQ 217
           +RR+  WS+Q++  +  RH   + W   GG ++R+
Sbjct: 3   VRRKDAWSMQVRQVEHPRHSYVQMWRKFGGPKKRE 37


>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 111 EFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVA 239
           E D+     YNY+    NG+  S+ G+L      DN  HV+ A
Sbjct: 65  EPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNN-HVLNA 106


>SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
          Length = 756

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 197 GGSRRRQQASRYCCCA 244
           GGSRRR   S++CC A
Sbjct: 97  GGSRRRNSKSKFCCFA 112


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -3

Query: 221 LVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGVEFRPNDLRVVLCRGGSDDGSHKGES 42
           LV  ++S  Q+T+   H A+ + + + V+ + AG +      R+ L R  S  G  + ES
Sbjct: 274 LVKAIQSPTQMTADKLHSALQNKDTLTVARMIAGADPTARFFRMRLARDTSATGVVECES 333

Query: 41  YND 33
            +D
Sbjct: 334 ADD 336


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,748,393
Number of Sequences: 59808
Number of extensions: 309385
Number of successful extensions: 934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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