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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10391
         (602 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4413| Best HMM Match : No HMM Matches (HMM E-Value=.)              161   3e-40
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.54 
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)                     31   0.54 
SB_12505| Best HMM Match : FHA (HMM E-Value=0.097)                     31   0.54 
SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007)                  29   2.2  
SB_20635| Best HMM Match : rve (HMM E-Value=0.91)                      29   2.9  
SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.9  
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_52533| Best HMM Match : rve (HMM E-Value=2)                         29   2.9  
SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7)                  29   2.9  
SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33)                     29   2.9  
SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)                 28   5.1  
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)                 28   5.1  
SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81)           28   6.7  
SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1)                      27   8.8  
SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)                   27   8.8  

>SB_4413| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 252

 Score =  161 bits (392), Expect = 3e-40
 Identities = 79/89 (88%), Positives = 83/89 (93%)
 Frame = +1

Query: 241 KNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 420
           K +  E IYLFSLPIKEFEIIDFFLG +L DEVLKIMPVQKQTRAGQRTRFKAFVAIGD+
Sbjct: 22  KIKTLEHIYLFSLPIKEFEIIDFFLGAALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDS 81

Query: 421 NGHIGLGVKCSKEVATAIRGAIILAKLSV 507
           NGH+GLGVKCSKEVATAIRGAIILAKLSV
Sbjct: 82  NGHVGLGVKCSKEVATAIRGAIILAKLSV 110



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +3

Query: 507 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 602
           +PVRRGYWGNKIGKPHTVPCKVTGKCGS  VR
Sbjct: 111 IPVRRGYWGNKIGKPHTVPCKVTGKCGSTRVR 142



 Score = 31.5 bits (68), Expect = 0.54
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 200 WVPVTKLGRLVREGKI 247
           WVPVTKLGRLV++ KI
Sbjct: 8   WVPVTKLGRLVKDLKI 23


>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1049

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -3

Query: 501 QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQG 322
           ++ + NS  N   D        TNMT + + G  CL     + TC+ L   DL NL+ + 
Sbjct: 235 RILRRNSQPNDQADVARLQSLITNMTEIYSTGKVCL-NITRNNTCMSL-DPDLGNLMSRS 292

Query: 321 RAEEEI 304
           R ++E+
Sbjct: 293 RNQDEL 298


>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 657

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -3

Query: 501 QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQG 322
           ++ + NS  N   D        TNMT + + G  CL     + TC+ L   DL NL+ + 
Sbjct: 519 RILRRNSQPNDQADVARLQSLITNMTEIYSTGKVCL-NITRNNTCMSL-DPDLGNLMSRS 576

Query: 321 RAEEEI 304
           R ++E+
Sbjct: 577 RNQDEL 582


>SB_12505| Best HMM Match : FHA (HMM E-Value=0.097)
          Length = 629

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 358 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVYQFEEVTGVT 537
           +KQT   Q+ R KA   +G +    G+GV+ +K     +     + +L VY  +E + V 
Sbjct: 56  EKQTEKIQQERHKALEDMGISIQSSGIGVEKNKFYLVNLNADPAMNELLVYYLKEHSKVG 115

Query: 538 RSE-SHTPSL 564
           R + +HTP +
Sbjct: 116 RLDANHTPDI 125


>SB_53780| Best HMM Match : RVT_1 (HMM E-Value=0.0007)
          Length = 280

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 474 NGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL 343
           N  G  LA  +   N+  +V NG K  + C LS T L LY HDL
Sbjct: 108 NAYGKSLAEFYNSNNL--IVLNGVK--QGCMLSPTLLNLYVHDL 147


>SB_20635| Best HMM Match : rve (HMM E-Value=0.91)
          Length = 748

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
           N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 155 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 192


>SB_5251| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 945

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
           N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 811 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 848


>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2211

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328  NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
            N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 2008 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 2045


>SB_52533| Best HMM Match : rve (HMM E-Value=2)
          Length = 212

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
           N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 95  NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 132


>SB_25521| Best HMM Match : NLPC_P60 (HMM E-Value=5.7)
          Length = 212

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
           N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 9   NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 46


>SB_993| Best HMM Match : rve (HMM E-Value=2.7e-33)
          Length = 735

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 328 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 441
           N  +LK++ +  Q +A  +  F+ FVA   +  H G G
Sbjct: 532 NRSILKVLKIATQEKADMQREFRKFVAAYRSTPHTGTG 569


>SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)
          Length = 1130

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 378 TAHTFQGICCHWRQQRSYW 434
           TA  +  ICCH +Q + +W
Sbjct: 486 TADQYDAICCHTQQSKKFW 504


>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
          Length = 897

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 376 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 465
           G++ + K F+A+G  NGH+     C  ++A
Sbjct: 356 GRKDKRKDFLALGLRNGHVEFRFSCGADIA 385


>SB_3036| Best HMM Match : Metallothionein (HMM E-Value=0.81)
          Length = 597

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +3

Query: 360 ETNTC--RTAHTFQGICCHWRQQRSYWFG-CEVQQGSRHCHSRRYYPC*VVCLPVRRGYW 530
           E  TC  +    ++G  C  + +R Y  G C VQ G+     RR Y      + VRR Y 
Sbjct: 113 EGGTCSVQVRRVYEGGTCSVQVRRVYEGGTCSVQGGTCSVQVRRAYEGGTCSVQVRRAYE 172

Query: 531 G 533
           G
Sbjct: 173 G 173


>SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1)
          Length = 939

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 207 LSPNSAVLFAKEKSTNREHLLVFFTNQR 290
           L PNS V   KEK  N  H L   TN R
Sbjct: 550 LPPNSVVPILKEKLENMRHKLPVITNLR 577


>SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)
          Length = 1277

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/66 (21%), Positives = 29/66 (43%)
 Frame = +1

Query: 229 CSRRKNRQTESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 408
           C+  +    + +Y+    I     + F   P  NDE+L ++   K ++   R + +  ++
Sbjct: 13  CAMDRKPSPDPVYVLRGTIGSVNALKFVPKPISNDEMLVVINDLKTSKVAHRLKPQDHMS 72

Query: 409 IGDNNG 426
            G N G
Sbjct: 73  FGSNPG 78


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,767
Number of Sequences: 59808
Number of extensions: 378570
Number of successful extensions: 1130
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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