Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30060
(824 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 134 1e-31
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 134 1e-31
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 33 0.28
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 33 0.28
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32) 30 2.6
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 30 2.6
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 29 4.6
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.6
SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08) 29 6.1
SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 28 8.0
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 134 bits (323), Expect = 1e-31
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQGL 442
+S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQGL
Sbjct: 67 MSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGL 126
Query: 443 DDLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLL 622
D L +RCAQYKKDGC FAKWRC + P ++ LAR + + ++
Sbjct: 127 DGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYA-SICQQNGLVPIV 185
Query: 623 KPEV 634
+PEV
Sbjct: 186 EPEV 189
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFT 62
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 134 bits (323), Expect = 1e-31
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Frame = +2
Query: 266 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE-DECTTQGL 442
+S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++ E TTQGL
Sbjct: 67 MSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGL 126
Query: 443 DDLAQRCAQYKKDGCHFAKWRCC*RSAATPPRTKLSRKTPMFLARLRFHLSEPTHSCRLL 622
D L +RCAQYKKDGC FAKWRC + P ++ LAR + + ++
Sbjct: 127 DGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYA-SICQQNGLVPIV 185
Query: 623 KPEV 634
+PEV
Sbjct: 186 EPEV 189
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +3
Query: 84 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 254
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFT 62
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 33.1 bits (72), Expect = 0.28
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 359 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 418
Query: 472 QEGRLPLRQ 498
+ GR P Q
Sbjct: 419 EPGRPPYEQ 427
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 324 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 383
Query: 472 QEGRLP 489
+ GR P
Sbjct: 384 EPGRPP 389
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 331 RPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPH 390
Query: 472 QEGRLP 489
+ GR P
Sbjct: 391 EPGRPP 396
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 33.1 bits (72), Expect = 0.28
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP +GR H PG P P
Sbjct: 125 RPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPPHELGRPPHEPGRPPHEPGRLPH 184
Query: 472 QEGRLPLRQ 498
+ GR P Q
Sbjct: 185 EPGRPPYEQ 193
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 90 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPY 149
Query: 472 QEGRLP 489
+ GR P
Sbjct: 150 EPGRPP 155
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +1
Query: 301 RDPLPEG*RWNASGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 471
R P G + G P E G P GR + RP GR H PG P P
Sbjct: 97 RPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPYEPGRPPH 156
Query: 472 QEGRLP 489
+ GR P
Sbjct: 157 EPGRPP 162
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 31.9 bits (69), Expect = 0.65
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 445 RPRPALRPVQEGRLPLRQVALLLKIGRNTPSYQAI-QENANVS-RPLT-LPSVRANAFVP 615
R RP RP R+ + + AL + G T S A+ + NANV+ +P + L S +P
Sbjct: 519 RSRPTSRPA---RVSVTRSALRSRKGNRTLSLPALPRSNANVTQKPRSRLSSRHKTEALP 575
Query: 616 IVEARSLYLMGEARTLEPRPRKVNLKVVLGRP 711
++ +S +A P+P+K NLK V +P
Sbjct: 576 KIKPQSRQSTAKA----PQPKKKNLKTVSMKP 603
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 278 ISGVILFHETLYQKADDGTPLVSLLEKK 361
+SG ++ +E L+Q DD TPLV +L ++
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_32406| Best HMM Match : VWA (HMM E-Value=8.8e-32)
Length = 1074
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +1
Query: 328 WNASGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGR---PRPALRPVQEGRLP 489
W G+P G P GR G P G + G+ PRP +RP + GR+P
Sbjct: 515 WRPGGIPGRTPGRRPG--GRPGNIPPFVPGLIIPSRRPGKRPGPRPGIRPGRGGRIP 569
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 29.9 bits (64), Expect = 2.6
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Frame = +1
Query: 433 PGSGRPRPALRPVQEGRLPLRQVALLLKIGRNTPSYQAIQENANVSRPLTLPSVR-ANAF 609
P + + RP RP ++ PL + R TP + RP P+ +
Sbjct: 171 PTTIKRRPTERPTKKPTKPLLPEVEPEEEERATPRPTKAKPTTMKRRPTERPTKKPTKPL 230
Query: 610 VPIVEARSLYLMGEARTLEPRPRKVNLKVVLGRPVLKRPLKRTTKFLPP 756
+P VE E PRP K + RP +RP K+ TK L P
Sbjct: 231 LPEVEPE------EEEKATPRPTKAKPTTIKRRPT-ERPTKKPTKPLLP 272
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = +1
Query: 523 RNTPSYQAIQENANVSRPLTLPSVR-ANAFVPIVEARSLYLMGEARTLEPRPRKVNLKVV 699
R TP + A + +P P+ + +P VE E PRP K +
Sbjct: 324 RPTPRPTKAKPTAIIRKPTERPTKKPTKPLLPEVEPE------EEERATPRPTKAKPTTI 377
Query: 700 LGRPVLKRPLKRTTKFLPPRGKFLKAQNWLNGP 798
RP +RP K+ TK L P + + + GP
Sbjct: 378 KRRPT-ERPTKKPTKPLLPEVESAEEERATPGP 409
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 779 WALRNF--PLGGKNLVVRLRGLFKTGRPRTTFKLTFLGRGSKVR 654
W L NF PL N+V R K GRPR F GR +VR
Sbjct: 244 WLLSNFTCPLCMLNIVERDNSKKKPGRPRRWFSSLACGRCLRVR 287
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 468 WAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSR 346
WAQ ++ SS PW S + SGT S+L ++ +S +
Sbjct: 5909 WAQNYSSSSSPWAPSSPASVRSGTYS-SSLATDILDTYSQK 5948
>SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08)
Length = 774
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -1
Query: 335 AFHRQPSGKGSRGTGS--HQRCSRRAQRQAE*ELAITTTVLLCVLHADVL-QTLSH 177
AFHR + S + S H R SRR +R++E +L + T L+ + L T++H
Sbjct: 660 AFHRHATKVYSEQSTSEHHPRASRRRRRRSERQLTVVTLALVVFIVLFTLPSTVTH 715
>SB_10368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 28.7 bits (61), Expect = 6.1
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +1
Query: 424 MHHPGSGRPRPALRPVQEGR-LP-LRQVALL--LKIGRNTPSYQAIQENANVSRPLTLPS 591
MH + RP PA+RP+ R LP +R V + L R P+ + + + LP+
Sbjct: 114 MHPLSAMRPLPAMRPLSAMRPLPAMRPVPAMRPLLAMRPLPAMRPLPAMRPLPAMRPLPA 173
Query: 592 VR-ANAFVPIVEARSLYLMGEARTLEPRPRKVNLKVVLGRPVLKRPLKRTTKFLPP 756
+R A P+ R L M + P P L + RPV P R +PP
Sbjct: 174 MRPLPAMRPLPAMRPLPAMRPLSAMRPLPAMRPLPAI--RPV---PAMRPLPAMPP 224
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 539 YEGVLRPIFSSNATWRSGSRPSCTGRSAGRGRPDPG 432
Y+ LR +S++TW G R +GRG D G
Sbjct: 165 YDPTLRSRITSDSTWDRGENNDNNWRFSGRGDEDDG 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,295,550
Number of Sequences: 59808
Number of extensions: 674751
Number of successful extensions: 1906
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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