Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00009
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33) 69 3e-12
SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33) 69 3e-12
SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33) 69 3e-12
SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33) 69 3e-12
SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0) 69 4e-12
SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33) 69 4e-12
SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32) 69 5e-12
SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12) 69 5e-12
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31) 67 1e-11
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 65 4e-11
SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33) 65 4e-11
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33) 65 6e-11
SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33) 65 6e-11
SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31) 62 3e-10
SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016) 62 4e-10
SB_31723| Best HMM Match : Histone (HMM E-Value=0.016) 59 3e-09
SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12) 59 3e-09
SB_7769| Best HMM Match : Histone (HMM E-Value=0.2) 49 3e-06
SB_30055| Best HMM Match : Histone (HMM E-Value=0.97) 44 1e-04
SB_50166| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_41324| Best HMM Match : BLUF (HMM E-Value=9) 31 0.67
SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 30 1.5
SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18) 29 4.7
SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42) 28 8.2
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 28 8.2
>SB_17049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 101 bits (243), Expect = 4e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA K
Sbjct: 96 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASK 145
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 364
+ G +KDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV
Sbjct: 139 LAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGV 180
>SB_56156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_55462| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_46252| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 134
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 31 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 79
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 73 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 127
>SB_1105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 393 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 441
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 435 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 489
>SB_26809| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_25701| Best HMM Match : Histone (HMM E-Value=4.8e-33)
Length = 126
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_54197| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_32396| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_32212| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ ATIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGATIAQGGVLPNIQASLLPKK 119
>SB_31835| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_28838| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_14747| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_55892| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA G V+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGRVLPNIQASLLPKK 119
>SB_54707| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 126
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_54557| Best HMM Match : PHK_AB (HMM E-Value=0)
Length = 863
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 760 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 808
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L++ TIA GGV+P+I L+ KK
Sbjct: 802 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLRGVTIAQGGVLPNIQAVLLPKK 856
>SB_54382| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_45182| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_42476| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_25226| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_19336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_11028| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_9842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_8583| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_8319| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_7498| Best HMM Match : Histone (HMM E-Value=9.4e-33)
Length = 125
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_48204| Best HMM Match : Histone (HMM E-Value=2.7e-32)
Length = 125
Score = 68.5 bits (160), Expect = 5e-12
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNA 254
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNA 69
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAACDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_58649| Best HMM Match : Histone (HMM E-Value=4.5e-12)
Length = 74
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFP+GRIHRHL+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPIGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELAGNAAR 71
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/50 (62%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPV R+HR+L+ + T H R+ A A VY AA++EYLTAE+LELAGNA +
Sbjct: 658 LQFPVSRVHRYLR-KCTHHYRISAAAPVYQAAVMEYLTAEILELAGNAAR 706
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 406
+ G A+D K RI PRH+ LA+ DEEL L+K TIA GGV+P+IH L+ K+ G
Sbjct: 700 LAGNAARDNKKTRIIPRHILLAVANDEELHKLLKGVTIASGGVLPNIHPELLKKRKG 756
>SB_29633| Best HMM Match : Histone (HMM E-Value=5.3e-31)
Length = 125
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/50 (66%), Positives = 40/50 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHRHL+ + RVGA A V+ AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVHLAAVLEYLSAEILELAGNAAR 71
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I SL+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQASLLPKK 119
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_1956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 119
>SB_38873| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 125
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 119
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRVHRFLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_57971| Best HMM Match : Histone (HMM E-Value=5.4e-33)
Length = 125
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGR+HR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRVHRFLRKGNYAK-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TI+ GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTISQGGVLPNIQAVLLPKK 119
>SB_31727| Best HMM Match : Histone (HMM E-Value=5e-33)
Length = 126
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/50 (66%), Positives = 39/50 (78%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHR L+ + RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGAPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_56326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGGPG 412
+ G A+D K RI PRHLQLA+R DEEL+ L++ TIA GGV+P+I L+ KK G
Sbjct: 29 LAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLQGVTIAQGGVLPNIQAVLLPKKSNTG 87
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 171 RVGATAAVYSAAILEYLTAEVLELAGNALK 260
RVGA A VY AA+LEYLTAE+LELAGNA +
Sbjct: 6 RVGAGAPVYMAAVLEYLTAEILELAGNAAR 35
>SB_18628| Best HMM Match : Histone (HMM E-Value=1.5e-31)
Length = 126
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNALK 260
LQFPVGRIHR L+ + RVGA VY AA+LEYL+AE+LELAGNA +
Sbjct: 23 LQFPVGRIHRLLRKGNYAE-RVGAGDPVYMAAVLEYLSAEILELAGNAAR 71
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 65 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 119
>SB_44162| Best HMM Match : Histone (HMM E-Value=0.00016)
Length = 67
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELA 245
LQFPVGRIHRHL+ + RVGA A VY AA+LEYL+AE+LELA
Sbjct: 23 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYLAAVLEYLSAEILELA 66
>SB_31723| Best HMM Match : Histone (HMM E-Value=0.016)
Length = 76
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 15 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 69
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +3
Query: 201 AAILEYLTAEVLELAGNALK 260
AA+LEYL+AE+LELAGNA +
Sbjct: 2 AAVLEYLSAEILELAGNAAR 21
>SB_28189| Best HMM Match : Histone (HMM E-Value=1.5e-12)
Length = 90
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 400
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 29 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGVLPNIQAVLLPKK 83
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3
Query: 171 RVGATAAVYSAAILEYLTAEVLELAGNALK 260
RVGA A VY AA+LEYL+AE+LELAGNA +
Sbjct: 6 RVGAGAPVYMAAVLEYLSAEILELAGNAAR 35
>SB_7769| Best HMM Match : Histone (HMM E-Value=0.2)
Length = 150
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +2
Query: 239 VGGKCAKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGV 364
+ G A+D K RI PRHLQLA+R DEEL+ L+ TIA GGV
Sbjct: 12 LAGNAARDNKKTRIIPRHLQLAVRNDEELNRLLHGVTIAQGGV 54
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 210 LEYLTAEVLELAGNALK 260
LEYL+AE+LELAGNA +
Sbjct: 2 LEYLSAEILELAGNAAR 18
>SB_30055| Best HMM Match : Histone (HMM E-Value=0.97)
Length = 129
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAIL 212
LQFPVGRIHRHL+ + RVGA A VY AA+L
Sbjct: 96 LQFPVGRIHRHLRKGNYAE-RVGAGAPVYMAAVL 128
>SB_50166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 299 LAIRGDEELDSLIKA-TIAGGGVIPHIHKSLIGKK 400
LA+R DEEL+ L+ TIA GGV+P+I L+ K+
Sbjct: 1 LAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKR 35
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 111 LQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVL 236
L FPVGRI R L + + RV AA+Y AA LEY+ E +
Sbjct: 72 LVFPVGRIFRWLLDMKVAC-RVYDAAAIYLAATLEYIAEETI 112
>SB_41324| Best HMM Match : BLUF (HMM E-Value=9)
Length = 192
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 155 DNKPRARRSYGSSLFCRYFGI--SYSRGFGVGGKCAKDLKVKRITPRHLQLAIRG 313
D+ PR ++Y ++F RY + SY +G+ G + +R+T R IRG
Sbjct: 21 DSAPRTLQAYTEAMFTRYRPLNNSYGYAYGLDGTTLTVRRKRRLTVRKFVRQIRG 75
>SB_44025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 111 LQFPVGRIHRHL 146
LQFPVGRIHRHL
Sbjct: 23 LQFPVGRIHRHL 34
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 203 RYFGISYSRGFGVGGKCAKDL-KVKRITPRHLQLAIRGDEELDSL 334
RY + SRG+G GG C K+ I H L GD +D L
Sbjct: 2725 RYDDLCRSRGWGAGGMCPPIFSKIVVIKGNHYSLGALGDIAIDDL 2769
>SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18)
Length = 593
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 278 ITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGPG 412
+T +H+ + R + LIK + G H+H+ L G++ G
Sbjct: 207 LTAKHINITNRTANVVKKLIKIGLLTNGSTTHVHRFLKGQRNNTG 251
>SB_56837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = +3
Query: 396 RKAVLVHPFNFKYVLLKSVFNSYFEQVPTFIL---YFTLAGFVKYLNNI-----MFY*SY 551
R+ + PFN ++ +L+ + N + V FIL +F+ G +K + + + +
Sbjct: 412 RRIIYSAPFNIEFEMLEIIMNELHDIVDVFILVESHFSAFGTIKPVRLLPRLHRNYLRRF 471
Query: 552 HHSVSYLNVDCVFPSSA 602
H + YL +D FP+ A
Sbjct: 472 HKKIIYLYMD-HFPTGA 487
>SB_38686| Best HMM Match : 7tm_1 (HMM E-Value=5.70048e-42)
Length = 366
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 342 QLSLAEASSHTYTNLSLERKAVLVHPFNFK 431
Q +L S T+T ++LER ++HPF K
Sbjct: 119 QDALVSVSVFTFTAIALERYRAIIHPFKPK 148
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 320 ELDSLIKATIAGGGVIPHIHKSLIGKKGGP 409
++ S++K TI+ + H+H +IG +G P
Sbjct: 307 DMKSMLKLTISIASGLAHLHMEIIGTQGKP 336
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,917,860
Number of Sequences: 59808
Number of extensions: 399428
Number of successful extensions: 1711
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1634
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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