Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0018
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19) 33 0.21
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 33 0.28
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 31 0.86
SB_20999| Best HMM Match : Mod_r (HMM E-Value=0.042) 31 0.86
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 29 3.5
SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_5914| Best HMM Match : 7tm_1 (HMM E-Value=4.5e-18) 29 3.5
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 29 4.6
SB_44562| Best HMM Match : 7tm_1 (HMM E-Value=9e-12) 28 6.0
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2) 28 6.0
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 28 8.0
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 28 8.0
SB_15723| Best HMM Match : DUF1639 (HMM E-Value=1.7) 28 8.0
>SB_24887| Best HMM Match : PspA_IM30 (HMM E-Value=0.19)
Length = 320
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 54 QRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD 233
++ +H LQR + ++ DKL+D V+ + + L T + + ES+L+
Sbjct: 73 EKDKHNRQLQRSVDKLNELLEEADKLKDVVSQKDEKIAVLSTN-HDFKEKQLRETESRLE 131
Query: 234 DWRVPFKRLHQYSTKKQKEIHALFPR 311
D++ K+L K K+I L R
Sbjct: 132 DFKNEVKKLQHTIKLKDKKIDGLESR 157
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +3
Query: 54 QRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD 233
++ +H LQR + ++ DKL+D V+ + + L T + + ES+L+
Sbjct: 78 EKDKHNRQLQRSVDKLNELLEEADKLKDVVSQKDEKIAVLSTN-HDFKEKQLRETESRLE 136
Query: 234 DWRVPFKRLHQYSTKKQKEIHAL 302
D++ K+L K K+I L
Sbjct: 137 DFKNEVKKLQHTIKLKDKKIDGL 159
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 QRARHTDALQRIMISFKHFEKKL-DKLQDDVNDHGKTLGDLKTMVSKLSQNTV 209
QR RH+D +QRI +H KL K++ ++ + + DL+ + K ++ +V
Sbjct: 198 QRQRHSDEIQRISAEHEHQCAKLSQKIESLSSEQEEAIQDLEKQLKKANKESV 250
>SB_20999| Best HMM Match : Mod_r (HMM E-Value=0.042)
Length = 193
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +3
Query: 54 QRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD 233
++ +H LQR + ++ DKL+D V+ + + L T + + ES+L+
Sbjct: 73 EKDKHNRQLQRSVDELNELLEEADKLKDVVSQKDEKIAVLSTN-HDFKEKQLRETESRLE 131
Query: 234 DWRVPFKRLHQYSTKKQKEIHAL 302
D + K+L K K+I L
Sbjct: 132 DSKNEVKKLQHTIKLKDKKIDGL 154
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +3
Query: 57 RARHTDA-LQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLS---QNTVIGPES 224
R+ H +A L+ S K +K + LQ+D+ + LG++K +S+ + Q+ E
Sbjct: 644 RSEHAEAALKDDKNSVKQLNEKNETLQNDLASRMEELGEVKRKLSETTDALQHETSAAEQ 703
Query: 225 KLDDWRVPFKRLHQYSTKKQKEIHALFPR 311
KL + ++ K KEI L R
Sbjct: 704 KLASLAAKLEEAFVANSAKTKEIEELTSR 732
>SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = +3
Query: 54 QRARHTDA-LQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKL 230
QR H D ++ ++ K +++L K+ VNDH K G+ + T +G + L
Sbjct: 377 QRQGHQDDDSNKVEVNAKRLQEELIKMA--VNDHSKQPGNENLVTEPTQDLTGVGRDGVL 434
Query: 231 DDWRVPFKRLHQYSTKKQKEIHALFPRERKTYSHCQLNQKL 353
P++ + Q S + ++ ++ ++++T Q Q++
Sbjct: 435 GTTVSPWQHVTQ-SAQAERTTYSYLSQQQQTQPTQQQQQQI 474
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 138 DVNDHGKTLGDLKTMVSKLSQNTVIGPESKLDDWRVPFKRLHQYSTKKQKEIHAL 302
D D+ + D T+ K +N PE + D R+ F Y+T+ + I+++
Sbjct: 124 DYTDYVEQPMDFSTVWRKFVENQYSDPEQLVSDIRLVFSNSRAYNTQPRSRIYSM 178
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +3
Query: 84 RIMISFKHFEKKLD-KLQDDVNDHGKTLGDLKTMVSKLSQNTVIGPESKLD--DWRVPFK 254
RI+ +K+LD ++ + V +H L DL+T K + + ES+++ D R+
Sbjct: 1062 RILXXXXSVKKELDCRIMEMVENHRHELDDLRTQAEKRLEELIQQHESEMEGVDSRIQQA 1121
Query: 255 RLHQYSTKKQKEIHALFPRERKTYSHCQLNQ 347
RL S KEI RE + + N+
Sbjct: 1122 RLE--SENNFKEILETHQREMEEIRNSHENK 1150
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +3
Query: 111 EKKLDKLQDDVNDHGKTLGDLKTMVSKLSQNT------VIGPESKLDDWRVPFKRLHQYS 272
EK L++ + + KT+ DLK S+L QN +I E+KL+ ++ +LH+ S
Sbjct: 75 EKALEQSRKEGAKKDKTIEDLKNKNSELEQNVQNLNNEIIKLEAKLEALQLENNKLHEDS 134
Query: 273 TKKQKEI 293
+ ++ I
Sbjct: 135 LEVKRTI 141
>SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +2
Query: 221 KQARRLEGTFQASASVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPIS 400
K A + S + +R S+P RK+ PLP K+L + + + S
Sbjct: 103 KPAAKKPAAKSPQQSPRRSRQRRRHQSLP-RKQQRNPLPKNLLPKNLLPRKLQNPSLQRS 161
Query: 401 VPPKIIRKRSPRTRKVETPRKTPTL 475
PP+ +R++ P ++ P ++ L
Sbjct: 162 QPPRNLRRKPPPRSPLKRPPRSKVL 186
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 284 KRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVETPRK 463
KR C +K +Q + K+K L+ Q+ I+ +S PP ++ KR T +VET
Sbjct: 1184 KRTKCKSSSPRK-LQKITTPEKSK-LETQSPIKVDVSLS-PPALVIKRQNNTWQVETKEH 1240
Query: 464 TPTLRSHKGLE 496
+ + K L+
Sbjct: 1241 ETSTTTTKRLQ 1251
>SB_5914| Best HMM Match : 7tm_1 (HMM E-Value=4.5e-18)
Length = 327
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = -3
Query: 208 TVFCESLLTIVLRSPKVLPWSFTSSCNLSSFFSKCLKEIII 86
T FC S++ + WS + C++ +F + C+ +I+
Sbjct: 238 TPFCVSVVMVAAMGESAKSWSAEALCSVIAFTNACMNPVIL 278
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +3
Query: 114 KKLDKLQDDVNDHG----KTLGDLKTMVSKLSQNTVI 212
+ L+KLQ V HG K GD++ M+ ++ Q T+I
Sbjct: 580 RALEKLQASVERHGDKYIKARGDVQRMIEEVKQETII 616
>SB_44562| Best HMM Match : 7tm_1 (HMM E-Value=9e-12)
Length = 276
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = -3
Query: 208 TVFCESLLTIVLRSPKVLPWSFTSSCNLSSFFSKCLKEIII 86
T FC S++ + WS + C++ +F + C+ +I+
Sbjct: 187 TPFCVSVVMVAAMGESAKSWSAEALCSVIAFTNACVNPLIL 227
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 299 SVPKRKKNIQPLPIKSKAKSLQNQNII---EAAFPISVPPKIIRKRSPRTRKVETPRKTP 469
S+P K + Q +KS++ +++ E A P PP + R+P TR TP +
Sbjct: 557 SIPA-KPSQQRAQLKSESTGSESETETSSEEEAAPTKTPPSTVNSRTPVTRAQSTPSLSS 615
Query: 470 TLRS 481
++ S
Sbjct: 616 SVTS 619
>SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2)
Length = 120
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 410 KIIRKRSPRTRKVETPRKTPTLRSH 484
K ++KR P TR + PR T T +SH
Sbjct: 18 KKVQKRGPYTRDDKCPRNTRTAKSH 42
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +2
Query: 263 SVQYEETKRDSCSVPKRKKNIQPLPIKSKAKSL--QNQNIIEAAFPISVPPKIIR---KR 427
+V E D+ S+ +KKN+ P+K+ A L +N + S+ K +R K+
Sbjct: 123 TVDSNEESSDTSSLENKKKNLNKYPVKNNADRLLVPPRNDLNDTEEDSLSKKQLREAAKQ 182
Query: 428 SPRTRKV--ETPRKTPTLRSHK 487
R K+ ET R+ L K
Sbjct: 183 KKREEKILLETERRLKKLEKEK 204
>SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 51 LQRARHTDALQRIMISFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKLSQ 200
+ R D L R+ I+F H +LQD+ N H + D+ L Q
Sbjct: 1061 ITRKELLDQLSRMRINFFHMAATSTRLQDEDNRHTVAIADMGNYQEVLRQ 1110
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 275 EETKRDSCSVPKRKKNIQPLP-IKSKAKSLQNQNIIEAAFPISVPPKIIRKRSPRTRKVE 451
++ K PK ++ P+P I + A+ + I + P+ P+I + P T + E
Sbjct: 28 DQPKAIQPETPKDTPSMLPVPEIATPAQQPETPKDIPSMVPV---PEIATSQQPETIQPE 84
Query: 452 TPRKTPTL 475
TP+ P++
Sbjct: 85 TPKDIPSM 92
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 96 SFKHFEKKLDKLQDDVNDHGKTLGDLKTMVSKL 194
S+K F K LDKL+ + H KT G + + S++
Sbjct: 276 SWKSFFKDLDKLKCNCKRHSKTCGCMSSNFSRM 308
>SB_15723| Best HMM Match : DUF1639 (HMM E-Value=1.7)
Length = 153
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 275 EETKRDSCSVPKRKKNIQPLPIKSKAKSLQNQNIIEAAFP----ISVPPKIIRKRSPRTR 442
E K S + K KN++ P K K ++L+ + ++P +S PK + RTR
Sbjct: 20 EVKKEQSDNARKPDKNLKHNPTK-KTQALKRSSPTSLSYPQKDWLSKKPK---NQDIRTR 75
Query: 443 KVETPRKTPT 472
K P KTP+
Sbjct: 76 KTPKPPKTPS 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,014,871
Number of Sequences: 59808
Number of extensions: 337797
Number of successful extensions: 1498
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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