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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0031
         (644 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)                     76   3e-14
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   1e-05
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)               47   1e-05
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)               46   3e-05
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)               44   1e-04
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)               44   1e-04
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)               42   3e-04
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)               42   3e-04
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)               42   3e-04
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   6e-04
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   7e-04
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)               41   7e-04
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)               40   0.002
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)               39   0.003
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)                38   0.005
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.016
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)                37   0.016
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)               37   0.016
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)               34   0.086
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)                34   0.11 
SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)                 33   0.15 
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)               33   0.15 
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)               28   5.7  
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  

>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
          Length = 783

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = +2

Query: 32  KKVKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDKTEW 199
           KK K  + PKR MSAYMLWLN  R++ K +NPG+ V E++K  GE+WK++ DK++W
Sbjct: 534 KKKKDPNAPKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKW 589


>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 557

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +2

Query: 38  VKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           VK  +  KRPM+A+M+W    R +   ENP +   EI+K+ G  WK + D
Sbjct: 321 VKPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 370


>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
          Length = 179

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +2

Query: 38  VKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           VK  +  KRPM+A+M+W    R +   ENP +   EI+K+ G  WK + D
Sbjct: 4   VKPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 53


>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 192

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
 Frame = +2

Query: 29  RKKVKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM--KDKTEW 199
           +K+ K  +KPKR +SAY  ++N  R+  K +NP      ++K  GE+W  M   DKT++
Sbjct: 93  KKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQY 151



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = +2

Query: 41  KMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM--KDKTEWXXXXX 214
           K  +KPK   SAY  +L   RE+ + E     + + +K   E WK+M  ++K  +     
Sbjct: 7   KDPNKPKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAG 66

Query: 215 XXXXXXXXDLESYMPMAVVAKGAKRRLK 298
                   +++SY P      G K+R K
Sbjct: 67  KDKERFKEEMQSYTPPPSEESGKKKRKK 94


>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1099

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +2

Query: 35  KVKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           K    D+ KRPM+A+M+W    R +   +NP +   EI+K+ G  WK + ++
Sbjct: 782 KANSADRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQ 833


>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
          Length = 398

 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +2

Query: 47  TDKP--KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           T KP  KRPM+A+M+W  +AR +   + P L   E++K  G++WK + D
Sbjct: 59  TQKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWKLLND 107


>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
          Length = 1204

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 15/54 (27%), Positives = 34/54 (62%)
 Frame = +2

Query: 29   RKKVKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
            ++K K+  +P +P+SAY ++    +   + +NP  +  EIAK  G++W+++ ++
Sbjct: 916  KRKTKIEGEPPKPLSAYQIFFKETQAAIRLQNPSAQFGEIAKIVGQMWENLPEE 969


>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
          Length = 523

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 29  RKKV-KMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           RKK  K  + PK P++ Y+ +LN  RE+ +SENP L   E+ +  G +W  +
Sbjct: 167 RKKAHKDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQL 218


>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
          Length = 245

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +2

Query: 50  DKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           D  KRP++++M+W    R     ENP +R  EI+K  G+ W+ M +
Sbjct: 8   DHVKRPLNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKMPE 53


>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
          Length = 267

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           KRPM+A+M+W +  R Q  +ENP L   +I+K  G  W+ +
Sbjct: 8   KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48


>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
          Length = 494

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           KRPM+A+M+W +  R Q  +ENP L   +I+K  G  W+ +
Sbjct: 8   KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48


>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 709

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +2

Query: 41  KMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           K   K KRPM+++M+W  SAR +   + P +   E++K  G++W+ +
Sbjct: 106 KKDPKVKRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRML 152


>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +2

Query: 32  KKVKMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           KK       KRPM+A+M+W    R +   E+P +   EI+K+ G+ WK + +
Sbjct: 37  KKKSDMQHVKRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSE 88


>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
          Length = 367

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           KRPM+++M+W    R +   ENP L   EI+K  G+ W  +  K
Sbjct: 95  KRPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTK 138


>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           KRPM+A+M+W    R     E P +   EI+K  G  WK+MKD+
Sbjct: 10  KRPMNAFMVWSKERRRIKSQECPRMHNSEISKILGCEWKAMKDE 53


>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 382

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +2

Query: 29  RKKVKMTDKPKRPMSAYMLW---LNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           RKK    +KPK P++ Y+ +   LNS RE  K ++P L   EI K  G+ W S+
Sbjct: 185 RKKEYDLNKPKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSL 238


>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +2

Query: 47  TDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           T++ KRPM+A+M+W    R +    NP L   E++K  G  W+++
Sbjct: 363 TERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRAL 407


>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 143

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +2

Query: 41  KMTDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           K  D  KRPM+AYM+W    R +   E P +   EI+K+ G  W S+
Sbjct: 3   KPGDHIKRPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSL 49


>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 374

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           KRPM+ +M+W    R Q   ENPG+    ++K  G  WK +
Sbjct: 9   KRPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKL 49


>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
          Length = 245

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 15/48 (31%), Positives = 30/48 (62%)
 Frame = +2

Query: 47  TDKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           ++K KRP++A++LW    R    +ENP +   +I++K G  W+ + ++
Sbjct: 16  SEKIKRPLNAFILWSKKRRRVIANENPQMHNFDISRKLGLEWQKLTEE 63


>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
          Length = 324

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 13/44 (29%), Positives = 27/44 (61%)
 Frame = +2

Query: 56  PKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKD 187
           P++P+  YM +     +Q K++NP  ++ +I K  G++W+ + D
Sbjct: 28  PEKPLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDD 71


>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 384

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 53  KPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDKTE 196
           K KRPM+A+M+W    R       P     EI+ + GEIW  +  + +
Sbjct: 100 KVKRPMNAFMIWARLHRSTIAKRYPQANNAEISIRLGEIWNDLSSEQQ 147


>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
          Length = 299

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 65  PMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           P+SA+ LW N AR+     NP +   ++ KK    WK + +K
Sbjct: 230 PLSAFELWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEK 271



 Score = 32.3 bits (70), Expect = 0.35
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +2

Query: 50  DKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           ++PK P+++Y  +    R +   + P L+  E+A K  + W+ M ++
Sbjct: 150 NQPKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEE 196


>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
          Length = 690

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   KNYFKIFAIRKKVKMTDKPKRPMSAYMLWLNSAREQ--XKSENPGLRVXEIAKKGGEIWK 175
           + Y K        K  DKPKRP +AY L+L + R++   K+   G ++  +A   GE W+
Sbjct: 559 QRYLKESGKNDPKKDPDKPKRPPTAYFLFLAAFRKEMAGKALEDGKKIPSLA---GERWR 615

Query: 176 SMKDK 190
            M D+
Sbjct: 616 EMSDE 620



 Score = 31.9 bits (69), Expect = 0.46
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = +2

Query: 29  RKKVKMTDKP--KRPMSAYMLWLNSAREQXKSEN-----PGLRVXEIAKKGGEIWKSMKD 187
           RKK    D P  KR  SAY+ + +  R + K+++     P  +  E+AK  GE WK + D
Sbjct: 485 RKKKAKGDGPVVKRASSAYIHFTSDFRAKLKAKSAKSGTPLPKANEVAKLAGEEWKKLND 544

Query: 188 K 190
           +
Sbjct: 545 E 545


>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
          Length = 201

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMKDK 190
           KRPM+A+M+W  + R +   + P +   EI+K  G  W  + ++
Sbjct: 10  KRPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEE 53


>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
          Length = 406

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 50  DKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMK--DKTEW 199
           D+  +  + + LWL   R+Q + ENP +   ++ K   + WK +   +K  W
Sbjct: 327 DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVW 378


>SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)
          Length = 200

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 50  DKPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           D+  +  + + LWL   R+Q + ENP +   ++ K   + WK +
Sbjct: 34  DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGL 77


>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
          Length = 271

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSM 181
           K PM+A+M+     R+   S NPG+   E +K  G  WK +
Sbjct: 10  KSPMNAFMVCSRGKRKHYASINPGMHNSEFSKSLGPEWKML 50


>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 548

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 53  KPKRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKSMK 184
           K KRP  A+  +     ++ K ENP L+  EI K   + W +++
Sbjct: 305 KHKRPTPAFFRFRQDYADKVKEENPHLKDAEIRKHLSDQWANLE 348


>SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)
          Length = 145

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 59  KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKS 178
           KR  S Y+L+ +  R   + E+P     EI++  GE W++
Sbjct: 36  KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 75


>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1361

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 59   KRPMSAYMLWLNSAREQXKSENPGLRVXEIAKKGGEIWKS 178
            KR  S Y+L+ +  R   + E+P     EI++  GE W++
Sbjct: 1269 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 1308


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,902,599
Number of Sequences: 59808
Number of extensions: 243695
Number of successful extensions: 562
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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