Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C11f
(408 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33392| Best HMM Match : zf-CCHC (HMM E-Value=0.043) 30 0.63
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.84
SB_22256| Best HMM Match : zf-CCHC (HMM E-Value=0.0025) 29 1.1
SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076) 28 2.6
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_7017| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0) 27 4.5
SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 27 4.5
SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 27 4.5
SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19) 27 4.5
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 27 4.5
SB_54453| Best HMM Match : PAN (HMM E-Value=3.4e-05) 27 4.5
SB_49565| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_16016| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08) 27 5.9
SB_53563| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 27 5.9
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 5.9
SB_16404| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08) 27 5.9
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08) 27 5.9
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 27 5.9
SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 27 7.8
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 27 7.8
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 27 7.8
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 7.8
SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24) 27 7.8
SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_25683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 27 7.8
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_6083| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_5734| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 7.8
SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24) 27 7.8
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 27 7.8
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05) 27 7.8
SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_25715| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_24493| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_23207| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 27 7.8
SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 27 7.8
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 27 7.8
>SB_33392| Best HMM Match : zf-CCHC (HMM E-Value=0.043)
Length = 348
Score = 30.3 bits (65), Expect = 0.63
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 34 CLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCSNGSCKIP 174
CL+ GH EC+ K+K + PS H L A +N IP
Sbjct: 20 CLKRGHPQRECRSKKKCEIVPSCPYFHHPLLHAHSPPASANAVTPIP 66
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.9 bits (64), Expect = 0.84
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 7 FPQGIRCQKCLEFGHWSYEC 66
+P RC +C E GH SYEC
Sbjct: 101 YPDKSRCYECGEGGHLSYEC 120
>SB_22256| Best HMM Match : zf-CCHC (HMM E-Value=0.0025)
Length = 238
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKA 132
C CL+ GH EC+ K+K + PS H L A
Sbjct: 19 CFSCLKRGHPQRECRSKKKCEIVPSCPYFPHPLLHA 54
>SB_11191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1577
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 22 RCQKCLEFGHWSYECKGK 75
RC +CL H SYECK K
Sbjct: 357 RCFRCLRKNHRSYECKSK 374
>SB_13237| Best HMM Match : zf-CCHC (HMM E-Value=0.0076)
Length = 558
Score = 28.3 bits (60), Expect = 2.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 13 QGIRCQKCLEFGHWSYECKGKR 78
+G +C KC + GH++ CKG++
Sbjct: 41 RGKKCAKCFKSGHFAACCKGEK 62
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 346 NRCQIQNHCCSLNQTRSPIHC 284
N C HCC N T IHC
Sbjct: 25 NECSAFEHCCKGNCTAKRIHC 45
>SB_7017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 27.9 bits (59), Expect = 3.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH++ C+ K
Sbjct: 185 VRCDKCTKVGHFAVVCRSK 203
>SB_45810| Best HMM Match : Na_Ca_ex (HMM E-Value=0)
Length = 582
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = -3
Query: 103 YVKDELGSC--VCPCTHSSSVQTP 38
Y +DE+GS VCPC S++TP
Sbjct: 338 YKEDEVGSTMKVCPCLPPVSIETP 361
>SB_34393| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 1198
Score = 27.5 bits (58), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH++ C+ K
Sbjct: 21 VRCDKCTKVGHFAAVCRSK 39
>SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30)
Length = 1191
Score = 27.5 bits (58), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH++ C+ K
Sbjct: 235 VRCDKCTKVGHFAAVCRSK 253
>SB_16197| Best HMM Match : zf-CCHC (HMM E-Value=0.19)
Length = 241
Score = 27.5 bits (58), Expect = 4.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAK 135
C C + HW CK K K +PS+ + K K K
Sbjct: 183 CNSCHKLHHWERVCKSKSK--TQPSKVQHKGKPNKGK 217
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.5 bits (58), Expect = 4.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGKR 78
C KC + GHW+ C+G +
Sbjct: 447 CFKCGQEGHWAKNCRGSK 464
>SB_54453| Best HMM Match : PAN (HMM E-Value=3.4e-05)
Length = 82
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 352 CLNRCQIQNHCCSLNQTRSPIHCCCHYQTSSNPP 251
CL RC+++ C SL CC + +T P
Sbjct: 31 CLQRCKMETQCQSLGFNVKSSLCCLNNRTVGQRP 64
>SB_49565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1571
Score = 27.5 bits (58), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH++ C+ K
Sbjct: 233 VRCDKCTKVGHFAAVCRSK 251
>SB_16016| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)
Length = 890
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH+ C+ K
Sbjct: 86 VRCDKCTKVGHFDAVCRSK 104
>SB_53563| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 168
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 31 KCLEFGHWSYECK 69
KCL GHW+ EC+
Sbjct: 24 KCLRVGHWAKECR 36
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 346 NRCQIQNHCCSLNQTRSPIHC-CCHYQTSSNPPMTNQK 236
N CQ++ C Q +PI C C T +PP + K
Sbjct: 43 NECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCK 80
>SB_16404| Best HMM Match : RVT_1 (HMM E-Value=9.7e-08)
Length = 765
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH+ C+ K
Sbjct: 68 VRCDKCTKVGHFDAVCRSK 86
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 346 NRCQIQNHCCSLNQTRSPIHC-CCHYQTSSNPPMTNQK 236
N CQ++ C Q +PI C C T +PP + K
Sbjct: 1017 NECQMRQDACFNKQWTTPISCDPCSNFTCDSPPYSTCK 1054
>SB_7525| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-08)
Length = 256
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYEC 66
I C+KC E GH S++C
Sbjct: 125 IECRKCKERGHISFDC 140
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEEGQCSNGSCKIPNKKK 186
C KC +R L+ S++ +H+N+ A++EG C + + ++
Sbjct: 188 CDKCQIEQPEDKRDSDQRSDLIHSSQSEAVHRNVHAEDEGHIDEYGCGLHDNEQ 241
>SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 323
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 28 CNKCQKKGHFAKVCKGK 44
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
Length = 615
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 138 CNKCQKKGHFAKVCKGK 154
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 141 CNKCQKKGHFAKVCKGK 157
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 26.6 bits (56), Expect = 7.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 19 IRCQKCLEFGHWSYECKGK 75
+RC KC + GH++ C+ K
Sbjct: 242 VRCDKCNKVGHFAAVCRSK 260
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24)
Length = 283
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 4 AFPQGIRCQKCLEFGHWSYECKGKRK 81
A QG+ C C E GH + +C +K
Sbjct: 134 AVAQGVTCFHCRELGHRAADCPQTKK 159
>SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 579
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 197 CNKCQKKGHFAKVCKGK 213
>SB_25683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 249
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 76 CNKCQKKGHFAKVCKGK 92
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 125 CNKCQKKGHFAKVCKGK 141
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 13 QGIRCQKCLEFGHWSYECKGKRKILVRPSRTRIMHKNLKAKEE 141
+G C KC E GH++ K K K R ++ + H+ + +E
Sbjct: 1546 RGRMCNKCGEIGHFAKFAKAKSKTAERKNKGTV-HQLTEESDE 1587
>SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 358 FSCLNRCQIQNHCCSLNQTRSPIHC 284
+ CL CQ HC S N R C
Sbjct: 433 YDCLLACQANPHCVSYNYRRDKQEC 457
>SB_6083| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 176
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 76 CNKCQKKGHFAKVCKGK 92
>SB_5734| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 508
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 28 CNKCQKKGHFAKVCKGK 44
>SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24)
Length = 627
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 65 CNKCQKKGHFAKVCKGK 81
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 417 CNKCQKKGHFAKVCKGK 433
>SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05)
Length = 525
Score = 26.6 bits (56), Expect = 7.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 13 QGIRCQKCLEFGHWSYECK 69
+G+RC C +FGH +C+
Sbjct: 252 KGLRCYHCHKFGHIKRDCR 270
>SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 538
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 354 CNKCQKKGHFAKVCKGK 370
>SB_25715| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 270
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 28 CNKCQKKGHFAKVCKGK 44
>SB_24493| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 176
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 76 CNKCQKKGHFAKVCKGK 92
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_23207| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 260
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 76 CNKCQKKGHFAKVCKGK 92
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 233 CNKCQKKGHFAKVCKGK 249
>SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 434
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 218 CNKCQKKGHFAKVCKGK 234
>SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 462
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 353 CNKCQKKGHFAKVCKGK 369
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 517 CNKCQKKGHFAKVCKGK 533
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 25 CQKCLEFGHWSYECKGK 75
C KC + GH++ CKGK
Sbjct: 578 CNKCQKKGHFAKVCKGK 594
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,093,392
Number of Sequences: 59808
Number of extensions: 151889
Number of successful extensions: 1029
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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