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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0042
         (596 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6441| Best HMM Match : No HMM Matches (HMM E-Value=.)               41   7e-04
SB_35326| Best HMM Match : IPK (HMM E-Value=0)                         41   7e-04
SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)                  32   0.31 
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)                 31   0.93 
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.0  
SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.0  
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)                 28   6.6  
SB_54056| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_39886| Best HMM Match : PH (HMM E-Value=0.0007)                     27   8.7  
SB_8818| Best HMM Match : I-set (HMM E-Value=0)                        27   8.7  

>SB_6441| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 59

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 21/59 (35%), Positives = 36/59 (61%)
 Frame = +1

Query: 385 YIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKNEQAKLRCASSSTVLHTRLPGLQ 561
           +I++E++ R +  P IMD+K+G       + EEK + ++AK   AS+S  L  R+ G+Q
Sbjct: 2   FILMENIARDIAHPSIMDLKMGNEGHSDYSDEEKQERQRAKCD-ASTSKSLGVRIAGMQ 59


>SB_35326| Best HMM Match : IPK (HMM E-Value=0)
          Length = 598

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 23/62 (37%), Positives = 35/62 (56%)
 Frame = +1

Query: 376 EQEYIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKNEQAKLRCASSSTVLHTRLPG 555
           + E+I+LE++  +   PCI+D+K+G R     A  EK     AK+  ++S T L  R  G
Sbjct: 373 QSEFIVLENVAYQFSYPCILDLKMGTRQHGDDAPSEKRARIMAKVESSTSKT-LGVRACG 431

Query: 556 LQ 561
           LQ
Sbjct: 432 LQ 433


>SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)
          Length = 235

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = +2

Query: 32  KRTKVRRQRSIYQVHYN---IEKRNDELMTKPLALQKGLEIQAYD 157
           +R+ V R RS Y V  +   ++K+N+ +++KP+   +GL++  YD
Sbjct: 54  QRSDVERLRSTYHVSESFLAMDKQNEGIVSKPITDPEGLDLTCYD 98


>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
          Length = 1152

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 47  RRQRSIYQVHYNIEKRNDELMTKPLALQKGLEIQAYDLQVAG 172
           R +   YQ     EK++D+ ++   A  K  E + YD+ VAG
Sbjct: 669 RLRELCYQTDIQCEKQSDDALSDAAAKNKFYETRCYDINVAG 710


>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3176

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = +1

Query: 103  ADDEAPCPAERA*NPSLRSAGSRPQKDRRHQVLRFIAVQ*RNNPETHNQRFQRREVDFYE 282
            AD +  C    A NPS       P   R  +VLR +  Q ++    H        V F +
Sbjct: 1996 ADKDTTCKVPTAPNPSFAEYLLGPTASRTEEVLRQVKEQQQSLKRPHEISVPSVAVPFKK 2055

Query: 283  RMWASSDP 306
            R   S+DP
Sbjct: 2056 RSRLSTDP 2063


>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3066

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 554  PGSLVCRTVLLLAQRNLACSFLIFSSVASGSHVLLPIL 441
            P S +C  +L L   N AC  LI     + S +L+P+L
Sbjct: 2567 PSSSLCMAILDLYSDNSACGRLILELCNTLSQILVPLL 2604


>SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1246

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 373 YEQEYIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKN 495
           Y+  + IL++L    L+P  +D  I  RT   + TEE+ KN
Sbjct: 720 YKGVFSILDELGMPDLKPVFVDNFIQDRTLQYMGTEEEFKN 760


>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
          Length = 1021

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 236 SGLFRYCTAINLSTWCLRSFCGRLPADRRLG 144
           + L  Y TA+ +   C RS CGR+ A   +G
Sbjct: 418 AALSDYNTALGIQPGCARSLCGRMRAHFAIG 448


>SB_54056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 58

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 379 QEYIILEDLTRRMLEPCIMDVKIGKRTW 462
           QE + ++DL   +++  + DVK  KR W
Sbjct: 9   QEEVYVQDLENNVIQGYLKDVKANKRRW 36


>SB_39886| Best HMM Match : PH (HMM E-Value=0.0007)
          Length = 597

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 379 QEYIILEDLTRRMLEPCIMDVKIGKRTW 462
           QE + ++DL   +++  + DVK  KR W
Sbjct: 216 QEEVYVQDLENNVIQGYLKDVKANKRRW 243


>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
          Length = 2787

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +2

Query: 86   EKRNDELMTKPLA-LQ-KGLEIQAYDLQVAGHRKTEDTKYSGLLQCSNGTILKPIIKDS 256
            EK    ++ KPL+ LQ +   +  +++Q+AG+ K     Y G  +   GTI K +++DS
Sbjct: 1731 EKAVKPVIVKPLSNLQVEEKSLTRFEVQIAGNPKPRVAWYHGTTKLIEGTIYK-MLEDS 1788


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,328,723
Number of Sequences: 59808
Number of extensions: 446941
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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