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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0040
         (740 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)               128   4e-30
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)                     34   0.14 
SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)                   29   3.0  
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)                  29   4.0  
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)               28   6.9  
SB_22853| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)              28   9.1  
SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  

>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
          Length = 299

 Score =  128 bits (310), Expect = 4e-30
 Identities = 55/59 (93%), Positives = 57/59 (96%)
 Frame = +3

Query: 3   VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
           V+K AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 51  VNKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWH 109



 Score =  109 bits (262), Expect = 2e-24
 Identities = 49/87 (56%), Positives = 65/87 (74%)
 Frame = +2

Query: 257 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 436
           ARGH IEKI E+PLV++D ++ + KT  AV  L+ + A+ D+ K   S+++RAGKGKMRN
Sbjct: 136 ARGHRIEKIAEVPLVISDAIESVTKTSAAVKLLKAVNAYEDVEKCIDSKKIRAGKGKMRN 195

Query: 437 RRRIQRKGPLIIFNKDQGLTRAFRTSP 517
           RR + RKGPLII+N DQGL +AFR  P
Sbjct: 196 RRTVMRKGPLIIYNNDQGLRQAFRNLP 222



 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 487 GSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGR 585
           G    F ++PGVE             PGGHLGR
Sbjct: 213 GLRQAFRNLPGVELQHVDRLNLLKLCPGGHLGR 245


>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
          Length = 612

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 138 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWF 25
           HH  CY  H    Y Y+ H H  + + H  YP  RH++
Sbjct: 20  HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54


>SB_31207| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 445 TTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDDSLFGLVDLLDFVGYNQ 296
           +T + HF     KT R +H+K        P E     GL+D+LD  G+ Q
Sbjct: 18  STVLHHFIDKHAKTPRFLHMKP-----NGPGEGGGSSGLLDMLDAAGFEQ 62


>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 511

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -3

Query: 123 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQ 16
           Y +HP  T+ YHH  H +   ++ ++P + H +  Q
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTHRYHQQ 447



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 123 YRRHPDRTYGYHHHGHAEFGQQHVRYPMIRHWFGDQPP 10
           Y +HP  T+ YH H      + H ++P + H +  Q P
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTHRYQYQHP 268


>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 501

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 97  WVPPPRTRGIRATARPVPHD 38
           W+PP RTR  R T  PV H+
Sbjct: 228 WMPPVRTRPARPTVMPVTHE 247


>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
          Length = 453

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 138 HHDTCYRRHPDRTYGYHHHGHAEFGQQHVRY 46
           HH     RH  R + +HHH H E+ ++H RY
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH-RY 353


>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 147 TYVHHDTCYRRHPDRTYGYHHHGHA 73
           TY H DT  R+HPD     H   HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147


>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
          Length = 1080

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +3

Query: 27   TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 143
            T +E   +G ++ R PR  RGGG    G G  G   RGGR
Sbjct: 983  TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022


>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
          Length = 1098

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = +3

Query: 45  GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 173
           G GR + R P   GGG  R   G +G M  GG    P   W R
Sbjct: 271 GQGRGMGRGP---GGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310


>SB_22853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 134

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 591 DETSKMTSRSQLQEVQLVNIQE-LHTGDVRKAR 496
           DETS  +SRS++Q   LV   E LH  D+   R
Sbjct: 39  DETSSPSSRSRIQASSLVKTNEFLHARDISPVR 71


>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
          Length = 628

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +3

Query: 42  WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 173
           WG G+    + R  GGG  R   G +G M  GG    P   W R
Sbjct: 24  WGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66


>SB_23350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 704

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 493 QTLILVEDYEGSLTLDTTTVAHFTLTSTKTL 401
           Q LIL+  Y   + L+T+++  F+L S KT+
Sbjct: 235 QELILIPYYTEKVALETSSLIEFSLLSAKTI 265


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,376,016
Number of Sequences: 59808
Number of extensions: 488222
Number of successful extensions: 1809
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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