Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0012
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 115 4e-26
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 115 4e-26
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_50697| Best HMM Match : C2 (HMM E-Value=0.59) 29 3.6
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38) 29 3.6
SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019) 29 3.6
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.6
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 28 8.3
SB_18905| Best HMM Match : Nop (HMM E-Value=0) 28 8.3
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 28 8.3
SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 28 8.3
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 115 bits (276), Expect = 4e-26
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
QLLF+S +S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++
Sbjct: 58 QLLFTSGKEMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTD 117
Query: 452 -DECTTQGLDDLAQRCAQYKR 511
E TTQGLD L +RCAQYK+
Sbjct: 118 AGETTTQGLDGLGERCAQYKK 138
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +1
Query: 505 QEDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHD 684
++DGC FAKWRCVLKI TPS A++ENANVLARYASICQ +VPIVEPEVL DG+H
Sbjct: 137 KKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHT 196
Query: 685 L 687
L
Sbjct: 197 L 197
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +3
Query: 117 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEE 254
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEE
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEE 51
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 115 bits (276), Expect = 4e-26
Identities = 57/81 (70%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
QLLF+S +S ISGVILFHET+YQKADDGTP V LL +GIIPGIKVDKGVV L G++
Sbjct: 58 QLLFTSGKEMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTD 117
Query: 452 -DECTTQGLDDLAQRCAQYKR 511
E TTQGLD L +RCAQYK+
Sbjct: 118 AGETTTQGLDGLGERCAQYKK 138
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +1
Query: 505 QEDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHD 684
++DGC FAKWRCVLKI TPS A++ENANVLARYASICQ +VPIVEPEVL DG+H
Sbjct: 137 KKDGCDFAKWRCVLKITDYTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHT 196
Query: 685 L 687
L
Sbjct: 197 L 197
Score = 78.6 bits (185), Expect = 4e-15
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +3
Query: 117 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEE 254
TPEL+ ELK+IA+AIVA KGILAADESTGTMGKRL +IGVENTEE
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEE 51
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 2 CQPSITCVVADPKSASLSCCN*YKNKKITNNVHLLSIPNS*AAGGAQEDR--SSNCSSRK 175
CQ TC + + +C Y + TNNV+ + P+ GG +D S +C+
Sbjct: 3885 CQNGGTCASPSSSNYTCTCAPGYTGENCTNNVNECNDPDLCKNGGVCKDSFGSYSCNCSS 3944
Query: 176 GYPGR 190
Y G+
Sbjct: 3945 AYSGK 3949
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 311 ISGVILFHETLYQKADDGTPLVSLLEKK 394
+SG ++ +E L+Q DD TPLV +L ++
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_50697| Best HMM Match : C2 (HMM E-Value=0.59)
Length = 437
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 AQYKRTAATSPS-GVAC*RLAATPPRTKLSRKTPMFSPATPPSVRAN 634
A+++ T+ TSPS V C T + +RKTP FS T P + N
Sbjct: 2 AKFELTSVTSPSVEVECGGAVVTSDVIRDTRKTPNFSKPTLPRMILN 48
>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
Length = 761
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 347 QKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYK-RTAAT 523
+K DD +S E ++P K G+ CT +G+D L Q + + R +
Sbjct: 202 KKFDDNIIDLSFTEDLDVLPKTKSKGSYCSCEGNNTRCTNEGIDRLEQSPNKCEARYSDI 261
Query: 524 SPSG 535
SPSG
Sbjct: 262 SPSG 265
>SB_3201| Best HMM Match : C2 (HMM E-Value=0.0019)
Length = 278
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 AQYKRTAATSPS-GVAC*RLAATPPRTKLSRKTPMFSPATPPSVRAN 634
A+++ T+ TSPS V C T + +RKTP FS T P + N
Sbjct: 150 AKFELTSVTSPSVEVECGGAVVTSDVIRDTRKTPNFSKPTLPRMILN 196
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 501 WAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSR 379
WAQ ++ SS PW S + SGT S+L ++ +S +
Sbjct: 5909 WAQNYSSSSSPWAPSSPASVRSGTYS-SSLATDILDTYSQK 5948
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 437 LFGSEDECTTQGLDDLAQRCAQYKRTAATSPSGV 538
L+G+ DEC QG + + CA+++R + S +
Sbjct: 907 LYGALDECFGQGYKKVLRSCARFERKTKMTHSRI 940
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 RDPLPEG*RWNPSGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 504
R P G + G P E G P GR + RP GR H PG P RP
Sbjct: 324 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPG-RPP 382
Query: 505 QEDG 516
E G
Sbjct: 383 YEPG 386
>SB_18905| Best HMM Match : Nop (HMM E-Value=0)
Length = 194
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +3
Query: 102 YFQYPTPELQEELKKIAQAIVAPAKGILAA-----DEST-GTMGKRLQD 230
YF + ++++K A IVA AK LAA EST GT+GKRLQ+
Sbjct: 111 YFSPIVQNMPQDMRKKAARIVA-AKCTLAARVDSFHESTEGTIGKRLQE 158
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/64 (34%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = +1
Query: 334 RDPLPEG*RWNPSGLPAGEEGHHPRHQGR---QGCRPAVRIGRRMHHPGSGRPRPALRPV 504
R P G + G P E G P GR + RP GR H PG P RP
Sbjct: 90 RPPYEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPG-RPP 148
Query: 505 QEDG 516
E G
Sbjct: 149 YEPG 152
>SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +2
Query: 443 GSEDECTTQGLDDLAQRCAQYKRTAATSPSGVAC*RLAATPPRTKLSRKTPMF--SPATP 616
G+++ Q D L C++ R TS S TPP + TP P P
Sbjct: 15 GTKNVSRKQTPDSLLSHCSKISRPRPTSNSDAPAPFDTTTPPNEPHAPNTPSLPPDPCAP 74
Query: 617 PSVRANASCQLSSPKSYLMAST 682
P++ + + ++P L ST
Sbjct: 75 PTLNTEPTRE-TTPTPPLSFST 95
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 563 PPRTKLSRKTPMFSP-ATPPSVRANASCQLSSPKS 664
P T +S TP+ P A PP+ +A LSSP S
Sbjct: 252 PLLTTMSLDTPLAEPPAPPPTTPTSAGAPLSSPPS 286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,036,896
Number of Sequences: 59808
Number of extensions: 559903
Number of successful extensions: 1645
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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