Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30007
(626 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31) 29 2.3
SB_799| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08) 28 5.4
SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_30605| Best HMM Match : DUF601 (HMM E-Value=1.7) 28 7.1
SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 28 7.1
SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0) 27 9.4
SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_48302| Best HMM Match : HORMA (HMM E-Value=1.1) 27 9.4
SB_31176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_3992| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_1875| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_1660| Best HMM Match : DUF1241 (HMM E-Value=0.35) 27 9.4
SB_58397| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_54849| Best HMM Match : HORMA (HMM E-Value=0.54) 27 9.4
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 27 9.4
SB_31528| Best HMM Match : DDHD (HMM E-Value=2e-29) 27 9.4
SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_43153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 48.8 bits (111), Expect = 4e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 47 LNESLSDWIKKHVDETPLCILTPIFRDYEAYLKEIQ 154
LN+ +SDW++KHV P LTP+F DY ++KEI+
Sbjct: 111 LNQGVSDWVQKHVTSNPYIDLTPVFDDYRKHMKEIE 146
>SB_38188| Best HMM Match : rve (HMM E-Value=5.7e-31)
Length = 836
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 KEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSES--SRDLTVSGSSIFKLDP 316
+E ++Y + D SE+E +N+N + + K + + SES + L V+ F +
Sbjct: 354 EECSDDYVFNENDFSELEASQNMNVSNIDGLCKDVSSLTSESIIASSLGVAVGPFFNIRK 413
Query: 317 SKPFSTTPLSSSCNMLGD 370
S SC+ GD
Sbjct: 414 ESLECDAAPSPSCSSFGD 431
>SB_799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 266 IQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDTLPVFL 144
+ K F ++++ + FL H FL + QS +H T+ L
Sbjct: 298 VAKVFERIVYELFYAFLEKHDFLCKNQSGFRSIHSTMTALL 338
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 107 LTPIFRDYEAYLKEIQEEYHGPDGDCS-EI-ETKKNVNSETKNPVEKSKNGI 256
+TP+ RDY LKE ++ D D S E+ ETKK V ETK V+++K +
Sbjct: 1268 VTPLERDYVTLLKEWVDK----DLDLSKEVNETKKEV-QETKKDVQETKKEV 1314
Score = 28.3 bits (60), Expect = 5.4
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 65 DWIKKHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEI-ETKKNVNSETKNPVEK 241
D K VDET + +D + KE+QE D E+ ETKK + ETK V +
Sbjct: 1315 DETKTKVDETKKEV-QETKKDVQETKKEVQETKTKVDETNKEVQETKKEI-QETKKDVHE 1372
Query: 242 SKNGIFSESSRDL 280
K G SE + DL
Sbjct: 1373 VK-GKVSEMAVDL 1384
>SB_40488| Best HMM Match : HEAT (HMM E-Value=6.3e-08)
Length = 1185
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = -3
Query: 258 KIPFFDFSTGFFVSELTFFFVSISEQSPSGP*YSSCISFKYAS*SLNIGVKMHKGVSSTC 79
+ P+F ++G S + F + I + P Y SC ++++ L I + +H G+SSTC
Sbjct: 791 RAPYFSCASGIS-STCSLFLLCIQASAVRAP-YFSC-AYRHQQYVLLISL-VHTGISSTC 846
Query: 78 FL 73
L
Sbjct: 847 SL 848
>SB_10762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 647
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 77 KHVDETPLCILTPIFRDYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEK 241
+ + E L P+F+D EA KE EE+ D ++ KK+ + EK
Sbjct: 447 REIWEGSLNTTKPVFKDLEAQFKERTEEFEKMKKDVVGLKNKKSSLETSVQRAEK 501
>SB_43491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 463 RSPKREPCAYCWNAIYSACSC 401
R P YCWN I SA SC
Sbjct: 78 RRPNSTTVDYCWNTIISAYSC 98
>SB_30605| Best HMM Match : DUF601 (HMM E-Value=1.7)
Length = 329
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +2
Query: 131 EAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKL 310
EA EI+ H P CS+ +T V S PV K+ + + + S ++ + S +
Sbjct: 99 EATSSEIENPSHVPRDSCSKSQTFNPVRSGV--PVSKNLSNLRKDFSSEILIDTSITIQR 156
Query: 311 DPSKPFSTTPLSSS 352
+ T L+S+
Sbjct: 157 FSNSKIKTCNLTST 170
>SB_5064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 125 DYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRD 277
DY++ K + E + P C T+ N+ S +NP + NG SES+ +
Sbjct: 464 DYDSSFKHLLYELN-PALSCCLDTTEDNLISHIENPSKLHSNGRISESTSE 513
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 107 LTPIFRDYEAYLKEIQEEYHGPDGDCS-EI-ETKKNVNSETKNPVEKSK 247
+TP+ RDY LKE ++ D D S E+ ETKK V ETK V+++K
Sbjct: 172 VTPLERDYVTLLKEWVDK----DLDLSKEVNETKKEV-QETKKEVQETK 215
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +2
Query: 125 DYEAYLKEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSG-SSI 301
+YE ++E+Q E +C E++ N N ++ V++ G E + DL + G S
Sbjct: 442 EYEGQIRELQNENLDLRKECLELD---NENKILEDEVKQLSEGSTPEGN-DLDIYGRSEK 497
Query: 302 FKLDPSKPFSTTPLSSSCNMLGD 370
LD P S+ L + L D
Sbjct: 498 LCLDDEVPISSCELEAFETRLSD 520
>SB_58028| Best HMM Match : zf-C4 (HMM E-Value=0)
Length = 438
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 311 DPSKPFSTT--PLSSSCNMLGDKPKGFSFGINT 403
DP P S++ PL C + GDK G +G+ T
Sbjct: 63 DPDSPASSSSKPLYIDCAVCGDKSSGKHYGVYT 95
>SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 436 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 473
>SB_48302| Best HMM Match : HORMA (HMM E-Value=1.1)
Length = 330
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 275 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 312
>SB_31176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 158 EYHGPDGDCSEIETKKNVNSETKNPVEKSK-NGIFSESSRDLTVSGSSIFKLDPSKPFST 334
++ G DG CSEI KN+ K S+ IF S + G S F+ P P +T
Sbjct: 190 KFRGDDGKCSEIPYSKNIPEYAKEARPSSQWYSIFLHQSGPSSRVGGS-FE-SPEPPLAT 247
>SB_24980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 191 IETKKNVNSETK--NPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSSSCNML 364
++T +N S++ P + S G+ + +S +L +S+ K PF ++PLS++C +
Sbjct: 111 LKTARNFTSDSDAVRPHDFSDTGV-TPTSLELRAQSNSLLK----NPFKSSPLSNTC-IE 164
Query: 365 GDKPKGFSFGINTATSTINSIPAI 436
+ + + TA S ++ PA+
Sbjct: 165 SESERSLGTSV-TAPSRASAHPAV 187
>SB_3992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 209 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 246
>SB_1875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 48 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 85
>SB_1660| Best HMM Match : DUF1241 (HMM E-Value=0.35)
Length = 142
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 369 SPSILQELLNGVVENGLDGSNLN 301
+P I QEL++G+++ DG N+N
Sbjct: 50 NPGITQELVSGIMKKESDGINMN 72
>SB_58397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 227 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 264
>SB_54849| Best HMM Match : HORMA (HMM E-Value=0.54)
Length = 330
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 275 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 312
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 143 KEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSGSSIFK 307
KE ++ P+ C EI + K ++ E P E K +E T S +FK
Sbjct: 720 KEACKKPSSPEETCKEIYSSKEMSKEASLPEELFKEISSTEEGCQETSSTKEVFK 774
>SB_31528| Best HMM Match : DDHD (HMM E-Value=2e-29)
Length = 1123
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 116 IFRDYEAYLKEIQEEYHGP--DGDCSEIETKKNVNSETKNPVEKSKN 250
IF ++ +++E+ HG D D + T KN+ T N E +KN
Sbjct: 798 IFNQIRPFIHQVEEK-HGTSEDMDFEMMSTIKNLTKMTNNTTEMTKN 843
>SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 272 CSIQKKFHFLIFQQDFLFLN*HSFLSQFQSNHHLVHDT 159
CS K LI+ Q FL H L +FQ H T
Sbjct: 423 CSFSKILEKLIYNQLIFFLEKHKILFEFQFGFRKGHST 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,068,199
Number of Sequences: 59808
Number of extensions: 323268
Number of successful extensions: 939
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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